Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for clstn1

Gene Name Gene ID Reads Annotation
clstn1 ENSDARG00000031720 5286 calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]










Genes with expression patterns similar to clstn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. clstn1 ENSDARG00000031720 5286 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
2. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 4.141 0.788 - 0.790 - - 0.803 0.964 0.796 - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
3. myt1b ENSDARG00000102879 5411 4.109 0.887 - - 0.732 - 0.806 0.920 - 0.764 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
4. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 3.994 - - - 0.703 0.930 0.830 0.825 0.706 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
5. her2 ENSDARG00000038205 3219 3.581 0.840 0.962 - - - 0.834 0.945 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
6. nes ENSDARG00000088805 2710 3.572 0.854 - 0.903 - - 0.881 0.934 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
7. dbx2 2971 3.547 0.767 - - - 0.942 0.936 0.902 - - developing brain homeobox 2
8. dnajc5aa ENSDARG00000042948 2885 3.528 - - 0.916 0.732 - 0.942 0.938 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
9. fmnl2b ENSDARG00000075041 1744 3.509 - 0.965 0.908 - 0.918 0.718 - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
10. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 3.487 0.855 - - - 0.890 0.813 0.929 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
11. nova2 ENSDARG00000017673 7685 3.436 0.856 - - - - 0.915 0.929 - 0.736 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
12. nrarpb ENSDARG00000018958 6225 3.422 0.797 - - - - 0.808 0.944 0.873 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
13. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.39 0.910 - - 0.714 - 0.862 0.904 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
14. FP016176.1 FP016176.1 7030 3.389 - - - - 0.913 0.873 0.867 - 0.736
15. pou3f3a ENSDARG00000042032 2835 3.367 0.737 - 0.922 - - 0.826 0.882 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
16. TUBB8P7_1 TUBB8P7_1 2722 3.367 0.752 - 0.904 - - 0.807 0.904 - -
17. fyna ENSDARG00000011370 1679 3.354 0.843 - - 0.778 - 0.868 0.865 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
18. rheb ENSDARG00000090213 1432 3.35 0.810 - - - - 0.961 0.853 - 0.726 Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
19. tmeff1b ENSDARG00000056740 11253 3.348 - - - - 0.833 0.909 0.826 0.780 - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
20. pcdh1gc5 ENSDARG00000104826 10052 3.339 0.849 - - - - 0.749 0.953 0.788 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
21. CABZ01111990.1 CABZ01111990.1 4374 3.332 0.743 - - - - 0.918 0.926 - 0.745
22. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 3.321 0.807 - - - - 0.920 0.852 - 0.742 sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
23. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 3.31 - 0.947 - - - 0.848 0.796 - 0.719 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
24. ank2b ENSDARG00000043313 3065 3.308 0.830 - - - - 0.845 0.881 - 0.752 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
25. plp1a ENSDARG00000103732 3544 3.292 0.772 - - - 0.904 - 0.909 - 0.707 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
26. hes6 ENSDARG00000019335 4754 3.231 0.756 - 0.911 - - 0.765 - 0.799 - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
27. hmgb1b ENSDARG00000030479 10398 3.195 0.757 - - - - 0.780 0.888 0.770 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
28. tox ENSDARG00000032317 9126 3.18 0.737 - - - - 0.712 0.905 0.826 - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
29. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 3.179 0.768 - - 0.723 - 0.738 0.950 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
30. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 3.154 - - 0.901 - - 0.751 0.758 - 0.744 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
31. fabp7a ENSDARG00000007697 5211 3.129 0.718 - - - - 0.832 0.863 0.716 - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
32. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 3.124 0.854 - - - - 0.762 0.807 0.701 - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
33. CABZ01028287.1 CABZ01028287.1 626 3.108 0.735 - - 0.701 - 0.817 0.855 - -
34. epha4b ENSDARG00000011600 3110 2.741 0.914 - - - - 0.889 0.938 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
35. neurog1 ENSDARG00000056130 3924 2.738 0.889 - - - - 0.921 0.928 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
36. TUSC3 ENSDARG00000078854 1021 2.713 - - 0.896 - - 0.896 0.921 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
37. slc18a3a ENSDARG00000006356 1285 2.706 0.907 - - - - 0.870 0.929 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
38. tmem35 ENSDARG00000052567 5685 2.704 - - - - - 0.886 0.981 0.837 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
39. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.692 0.836 - - - - 0.937 0.919 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
40. slc8a2b ENSDARG00000100592 598 2.69 0.825 - - - - 0.946 0.919 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
41. C8H1orf106 C8H1orf106 2690 2.661 0.780 - - - - 0.954 0.927 - -
42. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.653 0.889 - - - - 0.870 0.894 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
43. AGO1 ENSDARG00000092644 4521 2.652 0.821 - - - - 0.925 0.906 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
44. map7d2a ENSDARG00000068480 513 2.652 0.849 - - - - 0.890 0.913 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
45. tmie ENSDARG00000069423 305 2.648 0.874 - - - - 0.882 0.892 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
46. SPOCK1 ENSDARG00000074644 794 2.644 0.774 - - - - 0.948 0.922 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
47. vim ENSDARG00000010008 3551 2.643 0.882 - - - - 0.872 0.889 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
48. TUBB8P7_2 TUBB8P7_2 565 2.642 0.887 - - - - 0.873 0.882 - -
49. C7H4orf48 C7H4orf48 1455 2.639 0.790 - - - 0.941 - 0.908 - -
50. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.637 0.758 - - - - 0.954 0.925 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
51. nhlh2 ENSDARG00000025495 1860 2.635 - - - 0.780 - 0.943 0.912 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
52. nadl1.1 1200 2.634 0.851 - - - - 0.856 0.927 - - neural adhesion molecule L1.1, transcript variant X1
53. sall3b ENSDARG00000057586 982 2.61 0.788 - - - - 0.913 0.909 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
54. elavl3 ENSDARG00000014420 8644 2.602 - - - - 0.705 0.957 0.940 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
55. tuba1c ENSDARG00000055216 8384 2.599 0.832 - - - - 0.827 0.940 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
56. scn2b ENSDARG00000101713 796 2.598 0.772 - - - - 0.907 0.919 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
57. sypb ENSDARG00000002230 262 2.597 0.775 - - - - 0.933 0.889 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
58. stx1b ENSDARG00000000503 2724 2.595 0.830 - - - - 0.860 0.905 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
59. ctnnd2b ENSDARG00000003779 964 2.593 0.788 - - - - 0.891 0.914 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
60. bhlhe22 ENSDARG00000058039 1673 2.587 0.785 - - - - 0.896 0.906 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
61. slc35g2b ENSDARG00000045447 378 2.584 0.741 - - - - 0.923 0.920 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
62. gfap ENSDARG00000025301 5584 2.58 0.861 - - - - 0.793 0.926 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
63. her4.3 ENSDARG00000070770 613 2.58 0.747 - - - - 0.916 0.917 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
64. si:ch73-21g5.7 ENSDARG00000093156 9412 2.577 0.916 - - - - - 0.935 - 0.726 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
65. dync1i1 ENSDARG00000060948 554 2.576 0.786 - - - - 0.929 0.861 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
66. dpysl3 ENSDARG00000002587 4381 2.572 - - - - - 0.920 0.931 - 0.721 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
67. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.57 0.730 - - - 0.923 0.917 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
68. EPB41L1 EPB41L1 1896 2.568 0.758 - - - - 0.920 0.890 - -
69. CU928222.1 ENSDARG00000097436 1662 2.566 0.871 - - - - 0.737 0.958 - -
70. chat chat 463 2.565 0.830 - - - - 0.813 0.922 - -
71. msi1 ENSDARG00000010710 2634 2.565 0.739 - - - - 0.885 0.941 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
72. calca ENSDARG00000056590 150 2.561 0.785 - - - - 0.883 0.893 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
73. EFCC1 ENSDARG00000077826 1359 2.56 0.847 - - - - 0.833 0.880 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
74. pax6a ENSDARG00000103379 3061 2.559 0.807 - - - - 0.898 0.854 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
75. st8sia2 ENSDARG00000018788 2183 2.558 0.717 0.961 - - - - 0.880 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
76. celf4 ENSDARG00000070045 1537 2.557 0.769 - - - - 0.841 0.947 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
77. vgf ENSDARG00000105529 247 2.557 0.741 - - - - 0.880 0.936 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
78. irx1b ENSDARG00000056594 2224 2.551 0.774 - - - - 0.843 0.934 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
79. cspg5a ENSDARG00000069981 1699 2.547 - - - - - 0.941 0.902 - 0.704 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
80. gng3 ENSDARG00000009553 2530 2.544 0.700 - - - - 0.912 0.932 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
81. kcnc3a ENSDARG00000055855 1821 2.543 0.786 - - - - 0.851 0.906 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
82. atp6v0a1b ENSDARG00000015174 1052 2.54 0.748 - - - - 0.925 0.867 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
83. sox19b ENSDARG00000040266 532 2.54 0.809 - - - - 0.868 0.863 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
84. her8.2 ENSDARG00000069675 315 2.54 0.807 - - - - 0.855 0.878 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
85. nkx6.1 ENSDARG00000022569 3779 2.539 0.721 - - - 0.908 - 0.910 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
86. CHL1 CHL1 1553 2.528 0.761 - - - - 0.904 0.863 - -
87. nbeaa ENSDARG00000070080 862 2.525 0.771 - - - - 0.844 0.910 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
88. TUBA1A ENSDARG00000001889 25294 2.525 0.758 - - - - 0.823 0.944 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
89. pacsin1b ENSDARG00000042128 1051 2.525 - - - - - 0.802 0.892 0.831 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
90. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.522 0.746 - - - - 0.853 0.923 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
91. zgc:194665 ENSDARG00000004577 136 2.517 0.750 - - - - 0.927 0.840 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
92. map1aa ENSDARG00000059601 599 2.515 0.768 - - - - 0.947 0.800 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
93. gnao1a ENSDARG00000016676 8184 2.513 0.801 - - - - - 0.926 - 0.786 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
94. ckbb ENSDARG00000043257 3503 2.511 0.760 - - - - 0.901 0.850 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
95. RNF208 ENSDARG00000078056 60 2.509 0.736 - - - - 0.890 0.883 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
96. si:dkey-169l5.3 si:dkey-169l5.3 239 2.5 0.818 - - - - 0.748 0.934 - -
97. npas3b npas3b 1446 2.494 0.774 - - - - - 0.935 - 0.785
98. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.494 0.836 - 0.709 - - - 0.949 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
99. AKT3 AKT3 1729 2.493 - - - - - 0.819 0.924 - 0.750
100. mllt11 ENSDARG00000071026 2518 2.492 0.797 - - - - 0.793 0.902 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]

There are 2445 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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