Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cln3

Gene Name Gene ID Reads Annotation
cln3 ENSDARG00000037865 539 ceroid-lipofuscinosis, neuronal 3 [Source:ZFIN;Acc:ZDB-GENE-041114-174]










Genes with expression patterns similar to cln3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cln3 ENSDARG00000037865 539 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ceroid-lipofuscinosis, neuronal 3 [Source:ZFIN;Acc:ZDB-GENE-041114-174]
2. APOB_1 APOB_1 2217 3.289 - 0.821 0.809 - - 0.906 - 0.753 -
3. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 3.245 - - 0.712 - - 0.854 0.888 0.791 - fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
4. rpia ENSDARG00000056640, ENSDARG00000110576 8288 3.243 - - 0.751 - - 0.927 0.815 0.750 - ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
5. apoa4 apoa4 84813 3.227 - - 0.805 - - 0.817 0.778 0.827 -
6. sb:cb37 ENSDARG00000041645 2018 3.208 - - 0.834 - - 0.792 0.843 0.739 - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
7. CABZ01057488.1 ENSDARG00000110427 598 3.2 - - 0.787 - - 0.874 0.806 0.733 -
8. sepp1b 1004 3.181 - - 0.713 - - 0.899 0.736 0.833 - selenoprotein P, plasma, 1b
9. apoa2 ENSDARG00000015866 297380 3.16 - - 0.791 - - 0.822 0.741 0.806 - apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
10. mid1ip1l ENSDARG00000018145 2789 3.158 - - 0.726 0.711 - 0.902 0.819 - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
11. tfa ENSDARG00000016771 30517 3.154 - - 0.827 - - 0.771 0.793 0.763 - transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
12. CNDP1 CNDP1 6456 3.146 - - 0.841 - - 0.839 0.736 0.730 -
13. c3a c3a 6690 3.106 - - 0.779 0.717 - - 0.875 0.735 -
14. apobb apobb 258472 3.08 - - 0.779 - - 0.795 0.713 0.793 -
15. sid4 sid4 1358 3.075 - - 0.764 0.758 - - 0.824 0.729 -
16. vtnb ENSDARG00000053831 2364 3.07 - - 0.703 0.712 - 0.746 0.909 - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
17. apoc2 ENSDARG00000092155 38149 3.067 - - 0.820 - - 0.732 0.724 0.791 - apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
18. zgc:136410 ENSDARG00000102241 8433 3.064 - - 0.714 - - 0.825 0.817 0.708 - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
19. serpina1l ENSDARG00000090850 10625 3.059 - - 0.798 0.700 - - 0.813 0.748 - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
20. sardh ENSDARG00000058102, ENSDARG00000112110 2150 3.037 - - 0.804 - - 0.817 0.714 0.702 - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
21. pcbd1 ENSDARG00000031981 3373 3.026 - - 0.757 - - 0.724 0.829 0.716 - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
22. abca1b ENSDARG00000079009 14119 3.018 - - 0.762 0.715 - 0.838 - 0.703 - ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
23. aqp12 ENSDARG00000043279 1881 3.007 - - 0.719 - - 0.828 0.728 0.732 - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
24. slc25a20 ENSDARG00000040401 9258 2.974 - - 0.703 0.707 - 0.839 - 0.725 - solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
25. apoea ENSDARG00000102004 13212 2.909 - - 0.752 0.730 - 0.717 - 0.710 - apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
26. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 2.598 - - 0.786 - - 0.905 0.907 - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
27. cask cask 3384 2.566 - - - 0.736 - 0.949 0.881 - -
28. fahd2a ENSDARG00000103759 9581 2.535 - - 0.806 - - - 0.905 0.824 - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
29. ctsla ENSDARG00000007836 67814 2.523 - - - - - 0.841 0.842 0.840 - cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
30. cmbl ENSDARG00000073786 456 2.51 - 0.853 - - - 0.898 0.759 - - carboxymethylenebutenolidase homolog (Pseudomonas) [Source:ZFIN;Acc:ZDB-GENE-071004-21]
31. gpx4a ENSDARG00000068478 10991 2.508 - - 0.802 - - - 0.901 0.805 - glutathione peroxidase 4a [Source:ZFIN;Acc:ZDB-GENE-030410-2]
32. apom ENSDARG00000076838 4732 2.508 - - 0.812 - - 0.750 0.946 - - apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
33. SLC22A31 ENSDARG00000078882 1474 2.497 - - - - - 0.940 0.797 0.760 - solute carrier family 22, member 31 [Source:ZFIN;Acc:ZDB-GENE-130530-858]
34. pof1b ENSDARG00000054060 2355 2.474 - 0.771 - - - 0.794 0.909 - - POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
35. zgc:161979_1 zgc:161979_1 206500 2.46 - - - - - 0.900 0.787 0.773 -
36. plg ENSDARG00000023111 2429 2.454 - - 0.802 - - 0.838 - 0.814 - plasminogen [Source:ZFIN;Acc:ZDB-GENE-030131-1411]
37. CFI 3801 2.443 - - 0.729 - - 0.902 - 0.812 - complement factor I
38. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 2.438 - - 0.755 - - 0.861 - 0.822 - solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
39. kng1 ENSDARG00000022372, ENSDARG00000112486 2503 2.42 - - 0.756 - - 0.951 0.713 - - kininogen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-56]
40. fdps ENSDARG00000040890 4000 2.404 - 0.737 - - - 0.765 0.902 - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
41. CPN2 CPN2 682 2.39 - 0.708 - - - 0.797 - 0.885 -
42. zgc:161979 zgc:161979 196746 2.388 - - - - - 0.736 0.865 0.787 -
43. g6pca.2 ENSDARG00000013721 2034 2.379 - - - - - 0.843 0.707 0.829 - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
44. KRT222 ENSDARG00000071518 767 2.37 - 0.704 - - - 0.867 0.799 - - keratin 222 [Source:ZFIN;Acc:ZDB-GENE-070912-343]
45. dao.1 ENSDARG00000035602 11969 2.367 - - 0.828 - - - 0.717 0.822 - D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
46. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 2.355 - - - - - 0.801 0.791 0.763 - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
47. pim2 ENSDARG00000059001 1893 2.354 0.877 - - - - 0.750 0.727 - - Pim-2 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-000831-6]
48. c9 ENSDARG00000016319 3917 2.347 - - 0.706 - - - 0.818 0.823 - complement component 9 [Source:ZFIN;Acc:ZDB-GENE-050522-442]
49. sepp1a 41994 2.342 - - 0.762 - - 0.794 - 0.786 - selenoprotein P, plasma, 1a
50. psap ENSDARG00000013968 22919 2.334 - - 0.760 - - 0.769 - 0.805 - prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
51. sord ENSDARG00000053405 2406 2.324 - - 0.708 - - 0.894 - 0.722 - sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
52. fabp2 ENSDARG00000006427, ENSDARG00000110230 56349 2.321 - - 0.803 - - - 0.810 0.708 - fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
53. qsox1 ENSDARG00000039459 320 2.32 - - 0.731 - - - 0.869 0.720 - quiescin Q6 sulfhydryl oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7019]
54. apoa1b ENSDARG00000101324 336817 2.316 - - 0.741 - - 0.820 - 0.755 - apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
55. serpina1 ENSDARG00000090286 8108 2.308 - - 0.783 - - 0.711 - 0.814 - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
56. f2 ENSDARG00000036041 3129 2.305 - - 0.719 - - 0.809 - 0.777 - coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
57. apoa1a ENSDARG00000012076, ENSDARG00000110395 163437 2.301 - - 0.822 - - 0.767 - 0.712 - apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
58. apoc1l apoc1l 398664 2.299 - - - - - 0.771 0.735 0.793 -
59. zgc:152830 ENSDARG00000079932 12194 2.289 - - - - - 0.729 0.859 0.701 - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
60. pla2g12b ENSDARG00000015662 27239 2.289 - - 0.715 - - 0.783 - 0.791 - phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
61. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 2.286 - - 0.747 - - - 0.781 0.758 - stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
62. fgb ENSDARG00000008969 11737 2.284 - - 0.786 - - 0.795 - 0.703 - fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
63. fgg ENSDARG00000037281, ENSDARG00000114705 10817 2.273 - - 0.729 - - 0.741 - 0.803 - fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
64. bhmt ENSDARG00000013430 91357 2.27 - - 0.739 - - 0.754 - 0.777 - betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
65. pvalb9 ENSDARG00000071601, ENSDARG00000113946 30137 2.27 - - 0.767 0.710 - - - 0.793 - parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
66. suclg2 ENSDARG00000044914 7950 2.254 - - - - - 0.726 0.711 0.817 - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
67. TMEM179 ENSDARG00000013292 3452 2.25 - - - - - 0.794 0.706 0.750 - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
68. rpe ENSDARG00000005251, ENSDARG00000117024 3865 2.226 - - 0.704 - - 0.725 0.797 - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
69. rbp2a ENSDARG00000070038, ENSDARG00000115141 1688 2.204 - - 0.737 - - - 0.739 0.728 - retinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
70. rgrb ENSDARG00000098724 1546 1.799 - 0.912 - - - 0.887 - - - retinal G protein coupled receptor b [Source:ZFIN;Acc:ZDB-GENE-050522-447]
71. lrata ENSDARG00000037278, ENSDARG00000112503 1510 1.754 - 0.887 - - - - 0.867 - - lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1]
72. rgn ENSDARG00000098645, ENSDARG00000114128 936 1.733 - - - - - 0.916 0.817 - - regucalcin [Source:ZFIN;Acc:ZDB-GENE-040718-68]
73. nme3 ENSDARG00000100990 3889 1.703 - - - - - 0.919 0.784 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
74. btr02 ENSDARG00000052215 401 1.699 - 0.810 - - - 0.889 - - - bloodthirsty-related gene family, member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-228]
75. TMEM254 ENSDARG00000109902 3377 1.691 - - - - - 0.769 0.922 - - transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
76. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.688 - - - - - 0.854 0.834 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
77. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.685 - - - - - 0.913 0.772 - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
78. acsl5 ENSDARG00000075931 880 1.684 - 0.831 - - - 0.853 - - - acyl-CoA synthetase long chain family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-169]
79. MCOLN3_1 MCOLN3_1 192 1.682 - - - - - 0.866 0.816 - -
80. renbp ENSDARG00000008931 1848 1.671 - - - - - 0.925 - 0.746 - renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
81. SLC27A2_1 SLC27A2_1 974 1.67 - 0.751 - - - 0.919 - - -
82. bach1 bach1 1121 1.668 - - - - - 0.841 0.827 - -
83. RALGDS RALGDS 992 1.665 - - - - - 0.899 0.766 - -
84. asap2b ENSDARG00000019564 1660 1.664 - - - - - 0.933 0.731 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
85. neu1 ENSDARG00000008832 2848 1.664 - - - - - 0.927 0.737 - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
86. umps ENSDARG00000012215 4564 1.66 - 0.796 - - - 0.864 - - - uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
87. MPC2 ENSDARG00000024478 4194 1.66 - - - - - 0.876 0.784 - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
88. serpinc1 ENSDARG00000042684, ENSDARG00000110644, ENSDARG00000114606 1045 1.659 - - - - - - 0.958 0.701 - serpin peptidase inhibitor, clade C (antithrombin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-264]
89. cfb ENSDARG00000055278, ENSDARG00000110358 1725 1.656 - - - - - 0.841 - 0.815 - complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
90. diabloa ENSDARG00000104172 2192 1.655 - - - - - 0.795 0.860 - - diablo, IAP-binding mitochondrial protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1303]
91. cd9a ENSDARG00000005842 1708 1.655 - - - - - 0.832 0.823 - - CD9 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-1175]
92. akr1a1a ENSDARG00000035257, ENSDARG00000109404 548 1.654 - - - - - 0.823 - 0.831 - aldo-keto reductase family 1, member A1a (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040808-44]
93. CABZ01088149.1 ENSDARG00000114019 530 1.649 - - - - - 0.808 0.841 - - mitochondrial ubiquitin ligase activator of nfkb 1-A [Source:NCBI gene;Acc:402879]
94. comtd1 ENSDARG00000078918 238 1.648 - - - - - 0.865 0.783 - - catechol-O-methyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1072]
95. hmox1 hmox1 1391 1.647 - - 0.789 - - - 0.858 - -
96. TMEM106C ENSDARG00000098105 793 1.647 - - - - - 0.893 - 0.754 - transmembrane protein 106C [Source:ZFIN;Acc:ZDB-GENE-061013-562]
97. npc1 ENSDARG00000017180 3724 1.647 - - 0.797 - - 0.850 - - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
98. acp5a ENSDARG00000019763, ENSDARG00000111996 7752 1.641 - - - - - - 0.769 0.872 - acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
99. myl9b ENSDARG00000008030 7830 1.638 - - 0.754 - - 0.884 - - - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
100. gbp1 ENSDARG00000038668 520 1.636 - 0.833 - - - 0.803 - - - guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]

There are 1203 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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