Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for clk2a

Gene Name Gene ID Reads Annotation
clk2a ENSDARG00000062954 1890 CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]










Genes with expression patterns similar to clk2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. clk2a ENSDARG00000062954 1890 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
2. pum1 ENSDARG00000099256 5017 2.296 - 0.727 0.857 - - 0.712 - - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
3. rybpb ENSDARG00000053459 1464 1.969 - - 0.984 - - - 0.985 - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
4. zc3h18 ENSDARG00000062506 1676 1.968 - - 0.987 - - - 0.981 - - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
5. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.96 - - 0.985 - - - 0.975 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
6. cpsf1 ENSDARG00000034178 2036 1.942 - - 0.967 - - - 0.975 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
7. srrm2 ENSDARG00000037965 1967 1.928 - - 0.955 - - - 0.973 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
8. gigfy2 3194 1.923 - - 0.970 - - - 0.953 - - GRB10 interacting GYF protein 2, transcript variant X1
9. safb ENSDARG00000020467 5608 1.876 - - 0.943 - - - 0.933 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
10. fdx1l 461 1.847 - 0.855 0.992 - - - - - - ferredoxin 1-like
11. prkcda ENSDARG00000009208 1508 1.844 - - 0.982 - - - 0.862 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
12. PRR5 PRR5 630 1.826 - - - - - - 0.981 0.845 -
13. NTAN1 ENSDARG00000105182 844 1.794 - - - - - - 0.984 0.810 - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
14. dusp2 ENSDARG00000098108 353 1.789 0.816 - - - - - 0.973 - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
15. inppl1a ENSDARG00000104222 6256 1.758 - - 0.889 - - - 0.869 - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
16. grk5 ENSDARG00000032801 490 1.757 0.774 - - - - - 0.983 - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
17. arhgap24 ENSDARG00000100973 1105 1.755 - - 0.987 - - - - 0.768 - Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
18. flad1 ENSDARG00000070390 604 1.747 - - 0.992 - - - - 0.755 - flavin adenine dinucleotide synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-44]
19. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 1.737 - - - - - 0.747 0.990 - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
20. gadd45gip1 ENSDARG00000039338 1878 1.727 - - 0.974 - - 0.753 - - - growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
21. pard6b ENSDARG00000003865 990 1.719 0.728 - 0.991 - - - - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
22. zranb2 ENSDARG00000044332 6723 1.708 - - 0.981 - - - - - 0.727 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
23. nrg2a ENSDARG00000077818 854 1.704 - - - - - - 0.979 0.725 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
24. DHRS2 DHRS2 585 1.699 - 0.723 - - - - 0.976 - -
25. fmnl2b ENSDARG00000075041 1744 1.699 - - 0.973 0.726 - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
26. ik ENSDARG00000004161 3132 1.698 - - - 0.730 - - 0.968 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
27. tor1 ENSDARG00000077950 1027 1.698 0.715 - 0.983 - - - - - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
28. pcid2 ENSDARG00000013802 1596 1.691 - - - - - - 0.974 0.717 - PCI domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-79]
29. cdc42 ENSDARG00000044573 11795 1.664 - - 0.792 - - - 0.872 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
30. abl1 ENSDARG00000035187 3553 1.662 - - - - - 0.701 0.961 - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
31. sp3b ENSDARG00000007812 2928 1.652 - - - - - - 0.932 - 0.720 Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
32. lsm7 ENSDARG00000058328 7191 1.636 - - 0.816 - - - 0.820 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
33. alox12 ENSDARG00000069463 5787 1.631 - - 0.888 - - - 0.743 - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
34. frem1a ENSDARG00000069473 1847 1.61 0.731 - - - - - 0.879 - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
35. gars ENSDARG00000059070 17015 1.591 - - 0.869 - - 0.722 - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
36. srp72 ENSDARG00000014139 5221 1.584 - - - - - 0.727 0.857 - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
37. rnf14 ENSDARG00000043905 862 1.559 - - - - - 0.702 - 0.857 - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
38. rtf1 ENSDARG00000008947 6596 1.554 - - 0.827 - - - - - 0.727 RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
39. cand1 ENSDARG00000017841 8164 1.544 - - 0.811 - - 0.733 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
40. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.539 - - 0.835 - - - - - 0.704 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
41. myo1c myo1c 4978 1.523 - - - - - - 0.819 0.704 -
42. itgb1bp1 ENSDARG00000007169 2723 1.493 - - - - - 0.748 - 0.745 - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
43. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.465 - - - - - 0.744 - - 0.721 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
44. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.461 - - - - - - 0.739 - 0.722 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
45. eif3ba ENSDARG00000059654 22960 1.456 - - 0.755 - - - - - 0.701 eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
46. brap ENSDARG00000008560 821 0.996 - - 0.996 - - - - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
47. si:ch211-283l16.1 ENSDARG00000112586 131 0.996 - - 0.996 - - - - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
48. thbs1b ENSDARG00000010785 3095 0.996 - - 0.996 - - - - - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
49. CABZ01068153.1 CABZ01068153.1 211 0.996 - - 0.996 - - - - - -
50. tmem194b tmem194b 724 0.996 - - 0.996 - - - - - -
51. prr18 ENSDARG00000093768 409 0.996 - - 0.996 - - - - - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
52. dhx34 ENSDARG00000061168 349 0.995 - - 0.995 - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
53. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 0.995 - - 0.995 - - - - - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
54. rexo1 ENSDARG00000026986 770 0.995 - - 0.995 - - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
55. atg4a ENSDARG00000014531 481 0.995 - - 0.995 - - - - - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
56. edn2 ENSDARG00000070578 276 0.995 - - 0.995 - - - - - - endothelin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-774]
57. HDX ENSDARG00000079382 513 0.995 - - 0.995 - - - - - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
58. PKN2 ENSDARG00000101293 358 0.995 - - 0.995 - - - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
59. SEMA4C ENSDARG00000079611 610 0.995 - - 0.995 - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:ZFIN;Acc:ZDB-GENE-080303-16]
60. SON SON 510 0.994 - - 0.994 - - - - - -
61. foxd1 ENSDARG00000029179 726 0.994 - - 0.994 - - - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
62. tbpl1 ENSDARG00000036868 711 0.994 - - 0.994 - - - - - - TBP-like 1 [Source:ZFIN;Acc:ZDB-GENE-040520-2]
63. rad18 ENSDARG00000027938 574 0.994 - - 0.994 - - - - - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
64. s100a1 ENSDARG00000015543 274 0.994 - - 0.994 - - - - - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
65. cactin ENSDARG00000059866 553 0.994 - - 0.994 - - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
66. smg6 ENSDARG00000100481 493 0.993 - - 0.993 - - - - - - SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
67. dbf4 ENSDARG00000074796 489 0.993 - - 0.993 - - - - - - DBF4 zinc finger [Source:ZFIN;Acc:ZDB-GENE-091020-13]
68. nr1h3 ENSDARG00000098439 859 0.993 - - 0.993 - - - - - - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
69. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.993 - - 0.993 - - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
70. ubl3b ENSDARG00000021556 1210 0.992 - - 0.992 - - - - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
71. wtip ENSDARG00000103607 797 0.992 - - 0.992 - - - - - - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
72. TUSC3 ENSDARG00000078854 1021 0.992 - - 0.992 - - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
73. xpc ENSDARG00000039754 515 0.992 - - 0.992 - - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
74. zgc:195001 ENSDARG00000070484 3281 0.992 - - 0.992 - - - - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
75. wu:fb52c12 wu:fb52c12 763 0.992 - - 0.992 - - - - - -
76. BX323045.3 BX323045.3 1044 0.992 - - 0.992 - - - - - -
77. srebf2 ENSDARG00000063438 1982 0.992 - - 0.992 - - - - - - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
78. ints9 ENSDARG00000067913 600 0.992 - - 0.992 - - - - - - integrator complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-061013-129]
79. fam203a fam203a 570 0.992 - - 0.992 - - - - - -
80. ARMCX3 ARMCX3 328 0.992 - - 0.992 - - - - - -
81. nlk1 ENSDARG00000006566 1123 0.992 - - 0.992 - - - - - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
82. klf5a 1072 0.991 - - 0.991 - - - - - - Kruppel-like factor 5a
83. fbxo30a ENSDARG00000058561 867 0.991 - - - - - - 0.991 - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
84. agpat3 ENSDARG00000036549 1093 0.991 - - 0.991 - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
85. hsbp1a ENSDARG00000069425 1086 0.991 - - 0.991 - - - - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
86. CREB3L4 1085 0.991 - - 0.991 - - - - - - cAMP responsive element binding protein 3-like 4
87. hrasb ENSDARG00000005651 662 0.99 - - 0.990 - - - - - - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
88. irf2a ENSDARG00000007387 915 0.99 - - 0.990 - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
89. pi4k2a ENSDARG00000033666 1257 0.99 - - 0.990 - - - - - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
90. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 0.99 - - 0.990 - - - - - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
91. tmem203 ENSDARG00000104996 1182 0.99 - - - - - - 0.990 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
92. zmat5 ENSDARG00000035434 983 0.99 - - 0.990 - - - - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
93. tnfaip3 ENSDARG00000027777 1066 0.99 - - 0.990 - - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
94. BX571768.1 ENSDARG00000116980 711 0.99 - - 0.990 - - - - - -
95. rbm39b ENSDARG00000041853 1421 0.99 - - 0.990 - - - - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
96. tmco3 ENSDARG00000075108 368 0.989 - - - - - - 0.989 - - transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]
97. ppie ENSDARG00000103234, ENSDARG00000111596 511 0.989 - - 0.989 - - - - - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
98. si:dkey-71p21.9 si:dkey-71p21.9 603 0.989 - - 0.989 - - - - - -
99. zgc:113348 ENSDARG00000103795 1351 0.989 - - 0.989 - - - - - - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
100. dscr3 1229 0.989 - - 0.989 - - - - - - Down syndrome critical region 3

There are 1081 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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