Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for clip1a

Gene Name Gene ID Reads Annotation
clip1a ENSDARG00000078722 677 CAP-GLY domain containing linker protein 1a [Source:ZFIN;Acc:ZDB-GENE-060526-282]










Genes with expression patterns similar to clip1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. clip1a ENSDARG00000078722 677 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CAP-GLY domain containing linker protein 1a [Source:ZFIN;Acc:ZDB-GENE-060526-282]
2. dapk1 ENSDARG00000060093 351 1.694 0.902 - - - - - 0.792 - - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
3. vasna ENSDARG00000099266, ENSDARG00000111629 488 1.669 0.850 - - - - - 0.819 - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
4. vgll4a ENSDARG00000094332 1410 1.627 0.782 - - - - 0.845 - - - vestigial-like family member 4a [Source:ZFIN;Acc:ZDB-GENE-100922-230]
5. uhrf1bp1l ENSDARG00000004055 419 1.601 - 0.787 - - - 0.814 - - - UHRF1 binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-041210-177]
6. KCNQ2 KCNQ2 146 1.598 0.887 - - - - - 0.711 - -
7. agpat3 ENSDARG00000036549 1093 1.565 - - - - - 0.729 0.836 - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
8. fgfr1op2 ENSDARG00000009657 904 1.549 0.792 - - - - - 0.757 - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
9. srfbp1 ENSDARG00000075323 2262 1.546 0.760 0.786 - - - - - - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
10. shcbp1 ENSDARG00000102068, ENSDARG00000113939 423 1.517 0.790 - - - - - 0.727 - - SHC SH2-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5865]
11. chuk ENSDARG00000011662 1668 1.511 - 0.719 - - - 0.792 - - - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
12. prdm1b_1 ENSDARG00000098925 140 1.505 0.783 - - - - 0.722 - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
13. slc6a13l 121 1.499 0.751 - - - - - 0.748 - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
14. rnf6 ENSDARG00000077955 442 1.491 0.768 - - - - - 0.723 - - ring finger protein (C3H2C3 type) 6 [Source:ZFIN;Acc:ZDB-GENE-100209-1]
15. GRAMD2_1 GRAMD2_1 12 1.47 - - - - 0.713 0.757 - - -
16. ncaldb ENSDARG00000011334 123 1.452 - - - - - 0.744 0.708 - - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
17. rxrab ENSDARG00000035127 231 1.45 - 0.738 - - - 0.712 - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
18. sphk2 ENSDARG00000069893 1518 1.444 - - - - - 0.716 0.728 - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
19. slc25a39 ENSDARG00000007449 630 1.444 0.731 - - - 0.713 - - - - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
20. zgc:100868 ENSDARG00000004748 2582 1.432 - - - - - 0.718 0.714 - - zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
21. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.944 0.944 - - - - - - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
22. tph1b ENSDARG00000036082, ENSDARG00000112888 79 0.928 0.928 - - - - - - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
23. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 0.921 0.921 - - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
24. sgsh ENSDARG00000032087 294 0.916 0.916 - - - - - - - - N-sulfoglucosamine sulfohydrolase (sulfamidase) [Source:ZFIN;Acc:ZDB-GENE-030131-4958]
25. limk1b ENSDARG00000003022 172 0.916 0.916 - - - - - - - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
26. gdf11 ENSDARG00000044924 534 0.915 0.915 - - - - - - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
27. UBL7 UBL7 197 0.915 0.915 - - - - - - - -
28. dgat1b ENSDARG00000054914 119 0.914 0.914 - - - - - - - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
29. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.913 0.913 - - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
30. si:ch73-249k16.1 si:ch73-249k16.1 36 0.913 0.913 - - - - - - - -
31. pip5k1ca ENSDARG00000076001 53 0.911 0.911 - - - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a [Source:ZFIN;Acc:ZDB-GENE-050208-358]
32. mxa ENSDARG00000021688 14 0.909 0.909 - - - - - - - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
33. LPHN3 LPHN3 195 0.907 0.907 - - - - - - - -
34. si:dkeyp-75b4.9 ENSDARG00000015678 36 0.907 0.907 - - - - - - - - si:dkeyp-75b4.9 [Source:ZFIN;Acc:ZDB-GENE-090313-396]
35. si:ch211-66k16.28 ENSDARG00000088423 80 0.907 0.907 - - - - - - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
36. rft1 ENSDARG00000060398 146 0.906 0.906 - - - - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
37. si:dkey-15h8.11 si:dkey-15h8.11 1260 0.902 0.902 - - - - - - - -
38. cacng5a ENSDARG00000003326 17 0.902 0.902 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
39. GPR139 14 0.902 0.902 - - - - - - - - G protein-coupled receptor 139, transcript variant X1
40. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.902 0.902 - - - - - - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
41. CABZ01074081.1 CABZ01074081.1 109 0.902 0.902 - - - - - - - -
42. scpp5 ENSDARG00000078622 15 0.902 0.902 - - - - - - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
43. CABZ01038521.1 ENSDARG00000087306 10 0.902 0.902 - - - - - - - -
44. ERICH1 18 0.902 0.902 - - - - - - - - glutamate rich 1
45. CT955987.1 CT955987.1 9 0.902 0.902 - - - - - - - -
46. U3_1 U3_1 61 0.902 0.902 - - - - - - - -
47. mxtx1 ENSDARG00000069382 32 0.902 0.902 - - - - - - - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
48. si:dkey-146n1.4 si:dkey-146n1.4 12 0.902 0.902 - - - - - - - -
49. si:dkey-149i8.3 si:dkey-149i8.3 9 0.902 0.902 - - - - - - - -
50. col5a2b ENSDARG00000024847 17 0.902 0.902 - - - - - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
51. PLA2G4C_3 PLA2G4C_3 14 0.902 0.902 - - - - - - - -
52. ccr12.3 ccr12.3 79 0.902 0.902 - - - - - - - -
53. si:ch211-12e1.5 si:ch211-12e1.5 14 0.902 0.902 - - - - - - - -
54. CABZ01081656.1 CABZ01081656.1 14 0.902 0.902 - - - - - - - -
55. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 0.902 0.902 - - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
56. CABZ01086801.1 CABZ01086801.1 41 0.902 0.902 - - - - - - - -
57. ahsg ahsg 39 0.902 0.902 - - - - - - - -
58. si:dkey-6a5.10 si:dkey-6a5.10 17 0.902 0.902 - - - - - - - -
59. CR382327.4 CR382327.4 143 0.902 0.902 - - - - - - - -
60. btr21 ENSDARG00000058329, ENSDARG00000100450 120 0.902 0.902 - - - - - - - - bloodthirsty-related gene family, member 21 [Source:ZFIN;Acc:ZDB-GENE-081031-80]
61. si:dkey-93m18.6 ENSDARG00000093173 57 0.902 0.902 - - - - - - - - si:dkey-93m18.6 [Source:ZFIN;Acc:ZDB-GENE-091204-133]
62. si:dkey-10g2.5 si:dkey-10g2.5 72 0.901 0.901 - - - - - - - -
63. slc30a10 ENSDARG00000103983 46 0.901 0.901 - - - - - - - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
64. adra2a ENSDARG00000040841, ENSDARG00000111717, ENSDARG00000114002 44 0.901 0.901 - - - - - - - - adrenoceptor alpha 2A [Source:ZFIN;Acc:ZDB-GENE-021010-1]
65. creb5b ENSDARG00000070536 9 0.901 0.901 - - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
66. mfsd10 ENSDARG00000086786 304 0.9 0.900 - - - - - - - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
67. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 0.899 0.899 - - - - - - - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
68. st14b ENSDARG00000044655 415 0.898 0.898 - - - - - - - - suppression of tumorigenicity 14 (colon carcinoma) b [Source:ZFIN;Acc:ZDB-GENE-061103-613]
69. mcat ENSDARG00000016613, ENSDARG00000096473 140 0.898 0.898 - - - - - - - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-041111-231]
70. RPS6KA5 ENSDARG00000060551 109 0.898 0.898 - - - - - - - - ribosomal protein S6 kinase, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-130530-693]
71. foxq1b ENSDARG00000055395 549 0.897 0.897 - - - - - - - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
72. RAB43 ENSDARG00000059404 170 0.897 0.897 - - - - - - - - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
73. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 0.896 0.896 - - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
74. ccdc113 ENSDARG00000006981 67 0.896 0.896 - - - - - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
75. TP53I3 60 0.895 0.895 - - - - - - - - tumor protein p53 inducible protein 3, transcript variant X1
76. has3 ENSDARG00000057210, ENSDARG00000116537 108 0.894 0.894 - - - - - - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
77. cab39l ENSDARG00000036658 204 0.894 0.894 - - - - - - - - calcium binding protein 39-like [Source:ZFIN;Acc:ZDB-GENE-041114-204]
78. bmp6 ENSDARG00000015686 211 0.892 0.892 - - - - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
79. ZNF784_4 ZNF784_4 113 0.892 0.892 - - - - - - - -
80. pnck ENSDARG00000043648 114 0.892 0.892 - - - - - - - - pregnancy up-regulated nonubiquitous CaM kinase [Source:ZFIN;Acc:ZDB-GENE-081105-127]
81. spry2 ENSDARG00000078308 1200 0.889 0.889 - - - - - - - - sprouty RTK signaling antagonist 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7038]
82. mir148 75 0.888 0.888 - - - - - - - - microRNA 148
83. IL17RD ENSDARG00000098359 2309 0.888 - - - - - - 0.888 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
84. zgc:162184 ENSDARG00000077217 47 0.884 0.884 - - - - - - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
85. si:dkey-11f4.14 ENSDARG00000098461 35 0.884 0.884 - - - - - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
86. shisa3 ENSDARG00000075467 485 0.884 0.884 - - - - - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
87. zfyve9a ENSDARG00000101903 437 0.884 0.884 - - - - - - - - zinc finger, FYVE domain containing 9a [Source:ZFIN;Acc:ZDB-GENE-070705-182]
88. chsy3 ENSDARG00000069472 271 0.884 0.884 - - - - - - - - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
89. ftr51 ENSDARG00000029105 103 0.884 0.884 - - - - - - - - finTRIM family, member 51 [Source:ZFIN;Acc:ZDB-GENE-081104-54]
90. BX465851.1 BX465851.1 237 0.883 0.883 - - - - - - - -
91. bicc1b ENSDARG00000070497 406 0.881 0.881 - - - - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
92. zgc:103508 ENSDARG00000099273 50 0.879 0.879 - - - - - - - - zgc:103508 [Source:ZFIN;Acc:ZDB-GENE-041212-28]
93. CDKN2AIP ENSDARG00000035853 341 0.879 0.879 - - - - - - - - CDKN2A interacting protein [Source:ZFIN;Acc:ZDB-GENE-041010-188]
94. MSR1 MSR1 449 0.875 0.875 - - - - - - - -
95. rnf216 ENSDARG00000087893 518 0.873 0.873 - - - - - - - - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
96. igsf9b ENSDARG00000010408 786 0.873 0.873 - - - - - - - - immunoglobulin superfamily, member 9b [Source:ZFIN;Acc:ZDB-GENE-060810-28]
97. pld1b ENSDARG00000057125 325 0.872 0.872 - - - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
98. si:dkey-267k7.4 si:dkey-267k7.4 111 0.872 0.872 - - - - - - - -
99. zdhhc4 ENSDARG00000045159, ENSDARG00000117124 625 0.871 0.871 - - - - - - - - zinc finger, DHHC-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9031]
100. USO1 ENSDARG00000019581 1617 0.869 - - - - - 0.869 - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]

There are 730 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA