Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for clec3ba

Gene Name Gene ID Reads Annotation
clec3ba ENSDARG00000076541 3 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]










Genes with expression patterns similar to clec3ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. clec3ba ENSDARG00000076541 3 5 - - 1.000 - 1.000 1.000 - 1.000 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
2. ptx4 ENSDARG00000038072 2 2 - - - - - - - 1.000 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
3. 5S_rRNA_13 5S_rRNA_13 0 2 - - 1.000 - - - - - 1.000
4. shank3a ENSDARG00000063332 5 2 - - 1.000 - - - - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
5. UIMC1 200 2 - - 1.000 - - - - 1.000 - ubiquitin interaction motif containing 1
6. si:ch211-233m11.1 ENSDARG00000074653 1 2 - - 1.000 - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
7. si:rp71-7l19.6 si:rp71-7l19.6 12 1.764 - - 0.764 - - - - - 1.000
8. DNAJC11 1 1.751 - - - - - 0.751 - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
9. slc15a1b ENSDARG00000044528 6 1.751 - - - - - 0.751 - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
10. ptger2a ENSDARG00000011434 6 1.751 - - - - - 0.751 - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
11. CT030048.2 CT030048.2 3 1.733 - - 0.733 - - - - - 1.000
12. CABZ01031627.2 CABZ01031627.2 1 1.724 - - - - 0.724 - - 1.000 -
13. si:dkey-179o14.4 si:dkey-179o14.4 2 1.724 - - - - 0.724 - - 1.000 -
14. si:ch211-93g21.1 ENSDARG00000093602 5 1.724 - - 1.000 - 0.724 - - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
15. si:ch211-167b20.7 si:ch211-167b20.7 3 1.632 - - 0.764 - 0.868 - - - -
16. tmem168b ENSDARG00000062168 17 1.561 - - 0.764 - - - - - 0.797 transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
17. si:ch211-39i19.5 si:ch211-39i19.5 6 1 - - 1.000 - - - - - -
18. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 - - 1.000 - - - - - -
19. crhr1 ENSDARG00000003989 5 1 - - 1.000 - - - - - - corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
20. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
21. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
22. FAM46D FAM46D 0 1 - - - - - - - - 1.000
23. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
24. CR382372.1 ENSDARG00000096684 2 1 - - 1.000 - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
25. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
26. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
27. slc12a5a ENSDARG00000075815 9 1 - - 1.000 - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5a [Source:ZFIN;Acc:ZDB-GENE-120927-3]
28. htr5al htr5al 6 1 - - - - - - - - 1.000
29. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
30. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
31. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
32. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
33. si:dkey-54j5.1 si:dkey-54j5.1 4 1 - - 1.000 - - - - - -
34. guca1e ENSDARG00000101567 2 1 - - 1.000 - - - - - - guanylate cyclase activator 1e [Source:ZFIN;Acc:ZDB-GENE-040426-1577]
35. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
36. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
37. TAAR1 TAAR1 0 1 - - - - - - - - 1.000
38. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
39. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
40. ENSDARG00000089102 ENSDARG00000089102 1 1 - - 1.000 - - - - - -
41. xpnpep2 ENSDARG00000026017 16 1 - - 1.000 - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound [Source:ZFIN;Acc:ZDB-GENE-040426-1151]
42. zgc:136639os zgc:136639os 2 1 - - 1.000 - - - - - -
43. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
44. ppp1r14c_1 ENSDARG00000077341 3 1 - - 1.000 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
45. si:ch73-366i20.1_1 ENSDARG00000092949 1 1 - - 1.000 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
46. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
47. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
48. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
49. ppid_1 ENSDARG00000038835 4 1 - - - - - - - - 1.000 peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
50. ftr79 ENSDARG00000093972 1 1 - - 1.000 - - - - - - finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
51. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
52. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
53. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
54. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - 1.000 - - - - - -
55. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
56. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
57. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
58. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - - 1.000 -
59. gra ENSDARG00000078754 76 1 - - - - - 1.000 - - - granulito [Source:ZFIN;Acc:ZDB-GENE-081022-203]
60. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
61. MEI1 MEI1 2 1 - - - - - - - - 1.000
62. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
63. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
64. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
65. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
66. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
67. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - - - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
68. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
69. SRCIN1 SRCIN1 5 1 - - 1.000 - - - - - -
70. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
71. pcdh1a4 0 1 - - 1.000 - - - - - - protocadherin 1 alpha 4
72. U1_45 U1_45 0 1 - - 1.000 - - - - - -
73. AL929092.3 AL929092.3 0 1 - - 1.000 - - - - - -
74. si:dkey-29j8.4 si:dkey-29j8.4 17 1 - - 1.000 - - - - - -
75. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
76. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - 1.000 - - - - - -
77. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
78. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
79. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
80. si:dkey-20d21.6 si:dkey-20d21.6 0 1 - - 1.000 - - - - - -
81. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
82. mcoln1b ENSDARG00000058848 3 1 - - 1.000 - - - - - - mucolipin 1b [Source:ZFIN;Acc:ZDB-GENE-130514-1]
83. esyt1b ENSDARG00000014239 8 1 - - 1.000 - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
84. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - - - 1.000 -
85. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - 1.000 - - - - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
86. si:dkey-92j12.5 ENSDARG00000094677 5 1 - - 1.000 - - - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
87. dnajc5b ENSDARG00000058147 6 1 - - 1.000 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
88. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
89. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
90. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
91. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
92. BX936443.2 BX936443.2 28 1 - - 1.000 - - - - - -
93. apba1a ENSDARG00000103848 0 1 - - - - - - - - 1.000 amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
94. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - 1.000 - - - - - - si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
95. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
96. ldlrap1b ENSDARG00000039750 2 1 - - - - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
97. si:ch211-161n3.4 ENSDARG00000045752 0 1 - - 1.000 - - - - - - si:ch211-161n3.4 [Source:ZFIN;Acc:ZDB-GENE-110913-46]
98. si:ch73-111e15.1 ENSDARG00000008182 2 1 - - 1.000 - - - - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
99. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
100. FMN1 ENSDARG00000011975 2 1 - - 1.000 - - - - - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]

There are 556 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA