Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for clcn3

Gene Name Gene ID Reads Annotation
clcn3 ENSDARG00000003269, ENSDARG00000110064 2961 chloride channel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1699]










Genes with expression patterns similar to clcn3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. clcn3 ENSDARG00000003269, ENSDARG00000110064 2961 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chloride channel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1699]
2. cldnf ENSDARG00000043133 1006 2.618 - 0.840 - - - - 0.891 0.887 - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
3. c1galt1c1 ENSDARG00000036335 1623 2.554 - 0.926 - - - - 0.751 0.877 - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
4. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 2.499 0.752 - - - - 0.999 - 0.748 - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
5. gm2a ENSDARG00000088439 5387 1.897 - - - - - 0.995 0.902 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
6. TEP1 ENSDARG00000038713 289 1.869 - 0.973 - - - - - 0.896 - telomerase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6153]
7. sp7 ENSDARG00000019516 266 1.854 - 0.966 - - - - - 0.888 - Sp7 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040629-2]
8. slc7a8a ENSDARG00000075831 2987 1.832 - 0.959 - - - - 0.873 - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
9. f10 ENSDARG00000088581 4968 1.831 - 0.932 - - - - 0.899 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
10. c9 ENSDARG00000016319 3917 1.817 - - - - - 0.953 0.864 - - complement component 9 [Source:ZFIN;Acc:ZDB-GENE-050522-442]
11. ANXA1 ANXA1 1103 1.815 - 0.967 - - - - 0.848 - -
12. tefa ENSDARG00000039117, ENSDARG00000109532 3065 1.813 - - - - - 0.997 0.816 - - thyrotrophic embryonic factor a [Source:ZFIN;Acc:ZDB-GENE-990415-264]
13. bcl2l1 ENSDARG00000008434 1956 1.811 - 0.929 - - - - 0.882 - - bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
14. nfe2l2a ENSDARG00000042824 1707 1.809 - 0.959 - - - - 0.850 - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
15. ak3 ENSDARG00000058226 3160 1.801 - - - - - 0.994 0.807 - - adenylate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2142]
16. agr2 ENSDARG00000070480 5143 1.798 - - - - - 0.963 0.835 - - anterior gradient 2 [Source:ZFIN;Acc:ZDB-GENE-050417-214]
17. otub1b ENSDARG00000011462 4329 1.797 0.839 0.958 - - - - - - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
18. aldh8a1 ENSDARG00000036776, ENSDARG00000115119 462 1.793 0.794 - - - - 0.999 - - - aldehyde dehydrogenase 8 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040912-3]
19. tinagl1 ENSDARG00000061231 2677 1.792 - 0.910 - - - - 0.882 - - tubulointerstitial nephritis antigen-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-240]
20. rhpn2 ENSDARG00000014577 2537 1.789 - - - - - 0.987 - 0.802 - rhophilin, Rho GTPase binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9927]
21. CU633910.1 CU633910.1 828 1.78 - - - - - - 0.916 0.864 -
22. foxi3b ENSDARG00000009550, ENSDARG00000112022, ENSDARG00000112303 735 1.777 - 0.900 - - - - 0.877 - - forkhead box I3b [Source:ZFIN;Acc:ZDB-GENE-031126-4]
23. ensab ENSDARG00000061644 2436 1.773 - 0.955 - - - - 0.818 - - endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
24. cyp2aa9 ENSDARG00000098890 839 1.771 - 0.946 - - - - 0.825 - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
25. bri3 ENSDARG00000086332 8405 1.768 - - - - - 0.939 0.829 - - brain protein I3 [Source:ZFIN;Acc:ZDB-GENE-030131-3038]
26. abat ENSDARG00000006031 2143 1.756 - 0.961 - - - - 0.795 - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
27. itgav ENSDARG00000006314 4277 1.75 - 0.969 - - - - 0.781 - - integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
28. aco1 ENSDARG00000026376 5034 1.749 - - - - - 0.970 0.779 - - aconitase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-031118-76]
29. derl1 ENSDARG00000021905 4698 1.745 - 0.948 - - - - - 0.797 - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
30. gpx4a ENSDARG00000068478 10991 1.735 - - - - - 0.836 0.899 - - glutathione peroxidase 4a [Source:ZFIN;Acc:ZDB-GENE-030410-2]
31. capn2a ENSDARG00000091699 5924 1.731 - 0.816 - - - - 0.915 - - calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
32. zfhx4 ENSDARG00000075542 6927 1.728 - 0.979 - - - - 0.749 - - zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
33. abcc2 ENSDARG00000014031, ENSDARG00000116140 1158 1.727 - 0.937 - - - - 0.790 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1523]
34. prkci ENSDARG00000021225 2472 1.726 - 0.979 - - - - 0.747 - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
35. btbd10b ENSDARG00000020252 7251 1.723 - 0.917 - - - - 0.806 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
36. zgc:101663 ENSDARG00000037852 830 1.718 - 0.973 - - - - 0.745 - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
37. COL4A3BP COL4A3BP 3288 1.716 - - - - - 0.995 0.721 - -
38. suclg2 ENSDARG00000044914 7950 1.713 - 0.861 - - - - 0.852 - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
39. PARD3B_1 PARD3B_1 1735 1.712 - 0.853 - - - - 0.859 - -
40. mcl1b ENSDARG00000008363 3097 1.71 - - - - - 0.993 0.717 - - MCL1, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-030825-1]
41. gale ENSDARG00000002401 5489 1.706 - 0.888 - - - - 0.818 - - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
42. KRTCAP2 ENSDARG00000070386 10103 1.699 - - - - - 0.997 0.702 - - keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
43. ZBTB7B ENSDARG00000021891 843 1.696 - 0.975 - - - - 0.721 - - zinc finger and BTB domain containing 7B [Source:ZFIN;Acc:ZDB-GENE-040426-1134]
44. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.694 - 0.952 - - - - - 0.742 - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
45. BX927351.1 ENSDARG00000096844 125 1.688 0.785 - - - - - - 0.903 -
46. btr12 ENSDARG00000051809 1804 1.688 - 0.954 - - - - 0.734 - - bloodthirsty-related gene family, member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-548]
47. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.676 0.701 0.975 - - - - - - - OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
48. hn1l hn1l 8861 1.656 - 0.914 - - - - 0.742 - -
49. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.653 0.775 0.878 - - - - - - - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
50. epas1a ENSDARG00000008697 3225 1.652 - - - - - - 0.798 0.854 - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
51. MTUS1 MTUS1 1334 1.651 0.760 - - - - - 0.891 - -
52. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.644 - 0.943 - - - - 0.701 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
53. KRT78 KRT78 10751 1.64 - 0.894 - - - - 0.746 - -
54. npl ENSDARG00000009390 1377 1.636 - 0.929 - - - - 0.707 - - N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) [Source:ZFIN;Acc:ZDB-GENE-030131-926]
55. cd9a ENSDARG00000005842 1708 1.635 - 0.797 - - - - 0.838 - - CD9 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-1175]
56. zgc:56530 zgc:56530 6300 1.63 - 0.776 - - - - 0.854 - -
57. napepld ENSDARG00000009252 228 1.62 0.755 - - - - - - 0.865 - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
58. zgc:110425 ENSDARG00000058479 5216 1.618 - 0.901 - - - - 0.717 - - zgc:110425 [Source:ZFIN;Acc:ZDB-GENE-050522-103]
59. mknk2a ENSDARG00000011373 230 1.618 - - - - - - 0.759 0.859 - MAP kinase interacting serine/threonine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6099]
60. FAM83G ENSDARG00000062929 1142 1.608 - - - - - - 0.728 0.880 - family with sequence similarity 83 member G [Source:HGNC Symbol;Acc:HGNC:32554]
61. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.607 0.802 - - - - - 0.805 - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
62. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 1.58 0.768 - - - - - 0.812 - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
63. srpr 5148 1.577 - 0.799 - - - - 0.778 - - signal recognition particle receptor (docking protein)
64. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.574 - - - - - - 0.837 0.737 - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
65. adipor2 ENSDARG00000101849 3156 1.566 - 0.850 - - - - 0.716 - - adiponectin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-60]
66. serpinb1l4 ENSDARG00000096888 10462 1.563 - - - - - 0.844 0.719 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7169]
67. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 1.545 0.806 - - - - - 0.739 - - si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
68. mccc2 ENSDARG00000017571 5635 1.542 - 0.756 - - - 0.786 - - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
69. zgc:112265 ENSDARG00000100406 339 1.542 0.785 - - - - - 0.757 - - zgc:112265 [Source:ZFIN;Acc:ZDB-GENE-050626-133]
70. rhoac ENSDARG00000116058 9256 1.539 - 0.789 - - - - 0.750 - - ras homolog gene family, member Ac [Source:ZFIN;Acc:ZDB-GENE-040426-2665]
71. cux1b ENSDARG00000043134 641 1.533 0.734 - - - - - - 0.799 - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
72. cav1 ENSDARG00000103747 15519 1.505 - 0.774 - - - - 0.731 - - caveolin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2415]
73. rac2 ENSDARG00000038010 5837 1.503 0.766 - - - - - 0.737 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
74. si:dkey-102c8.3 ENSDARG00000113572 4779 1.501 - - - - - - 0.769 0.732 - si:dkey-102c8.3 [Source:ZFIN;Acc:ZDB-GENE-050208-328]
75. chl1a ENSDARG00000077881 1488 1.499 - - - - - - 0.710 0.789 - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
76. arid3b ENSDARG00000104034 16303 1.496 - - - - - 0.788 0.708 - - AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
77. dopey2 1088 1.49 0.712 - - - - - 0.778 - - dopey family member 2, transcript variant X2
78. iqgap1 ENSDARG00000078888 2915 1.488 - 0.765 - - - - 0.723 - - IQ motif containing GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050809-24]
79. adam17a ENSDARG00000043213 1305 1.487 - - - - - - 0.767 0.720 - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
80. cetp ENSDARG00000030872 611 1.481 0.709 - - - - - 0.772 - - cholesteryl ester transfer protein, plasma [Source:ZFIN;Acc:ZDB-GENE-041114-54]
81. AL935186.4 ENSDARG00000110268 1701 1.464 - 0.763 - - - - 0.701 - -
82. hopx ENSDARG00000089368 2342 1.461 - - - - - 0.758 0.703 - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
83. pvalb8 ENSDARG00000037790 1362 1.46 - - - - - - 0.745 0.715 - parvalbumin 8 [Source:ZFIN;Acc:ZDB-GENE-030805-3]
84. PTDSS2 ENSDARG00000101018 881 1.459 - - - - - - 0.747 0.712 - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
85. LRG1 LRG1 304 1.457 0.724 - - - - - 0.733 - -
86. nufip2 ENSDARG00000069066 3965 1.446 0.703 - - - - - 0.743 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
87. fcho2 ENSDARG00000035389, ENSDARG00000112245 1996 1.444 0.743 - - - - - 0.701 - - FCH domain only 2 [Source:ZFIN;Acc:ZDB-GENE-050522-228]
88. RSBN1 RSBN1 599 0.999 - - - - - 0.999 - - -
89. hoxc11a ENSDARG00000070351 1783 0.999 - - - - - 0.999 - - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
90. hnrnpua ENSDARG00000015206 4012 0.999 - - - - - 0.999 - - - heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
91. wipi1 ENSDARG00000040657 2732 0.999 - - - - - 0.999 - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
92. cyb5r1 ENSDARG00000018966, ENSDARG00000112062 1017 0.999 - - - - - 0.999 - - - cytochrome b5 reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8497]
93. BX571712.1 ENSDARG00000097833 764 0.999 - - - - - 0.999 - - -
94. sorbs1 ENSDARG00000103435 2297 0.998 - - - - - 0.998 - - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
95. erlin2 ENSDARG00000095968, ENSDARG00000110551 1023 0.998 - - - - - 0.998 - - - ER lipid raft associated 2 [Source:NCBI gene;Acc:100151163]
96. hsd11b3a hsd11b3a 1388 0.998 - - - - - 0.998 - - -
97. SCARNA6 SCARNA6 258 0.998 - - - - - 0.998 - - -
98. MYADM ENSDARG00000086815 659 0.998 - - - - - 0.998 - - - myeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]
99. anks1b ENSDARG00000003512 847 0.998 - - - - - 0.998 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-041210-349]
100. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 0.998 - - - - - 0.998 - - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]

There are 1222 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA