Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cks1b

Gene Name Gene ID Reads Annotation
cks1b ENSDARG00000007971 2739 CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]










Genes with expression patterns similar to cks1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cks1b ENSDARG00000007971 2739 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
2. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 3.242 - - 0.848 - 0.879 - 0.740 - 0.775 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
3. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.455 0.712 0.994 - - - - - - 0.749 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
4. whsc1l1 8544 2.449 - 0.986 - - - - 0.749 - 0.714 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
5. max ENSDARG00000024844 6035 2.444 - 0.976 - - - - 0.729 - 0.739 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
6. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.403 - - 0.920 - - - 0.781 - 0.702 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
7. patl1 ENSDARG00000017423 2744 2.353 0.793 - - - - - 0.782 - 0.778 protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
8. GATAD2B ENSDARG00000005834 3855 2.347 0.804 - - - - - 0.747 - 0.796 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
9. smarca5 ENSDARG00000052348 15433 2.246 - - - - 0.716 - 0.773 - 0.757 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
10. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 2.219 0.721 - - 0.702 - - 0.796 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
11. HNRNPAB HNRNPAB 22267 2.217 - - - - 0.773 - 0.722 - 0.722
12. ddx39ab ENSDARG00000015111 11619 2.208 - - 0.765 - - - 0.717 - 0.726 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
13. nkain1 ENSDARG00000006859 1961 1.991 - 0.998 - - 0.993 - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
14. rapgef2 ENSDARG00000005482 2586 1.924 - 0.995 0.929 - - - - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
15. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.917 - - 0.925 - 0.992 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
16. hif1ab ENSDARG00000034293 10284 1.914 - 0.964 - - 0.950 - - - - hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
17. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 1.901 - 0.971 - - 0.930 - - - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
18. lrp1b lrp1b 3216 1.895 - - 0.912 - 0.983 - - - -
19. snx12 ENSDARG00000019060 9563 1.893 - - 0.926 - 0.967 - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
20. CPEB4 CPEB4 3249 1.866 - 0.984 0.882 - - - - - -
21. tes ENSDARG00000051857 2020 1.849 0.854 0.995 - - - - - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
22. si:ch73-110p20.1 5932 1.827 - 0.984 0.843 - - - - - - si:ch73-110p20.1
23. boc ENSDARG00000074335 4832 1.824 - 0.842 - - 0.982 - - - - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
24. ppp2r2d ENSDARG00000102009 5710 1.818 - - 0.844 - 0.974 - - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
25. si:dkey-12j5.1 ENSDARG00000089480 3198 1.8 - 0.834 - - 0.966 - - - - si:dkey-12j5.1 [Source:ZFIN;Acc:ZDB-GENE-100922-71]
26. ppme1 ENSDARG00000009771 1697 1.793 - - - - 0.987 - 0.806 - - protein phosphatase methylesterase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7064]
27. smarce1 ENSDARG00000016871 9628 1.788 0.800 0.988 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
28. fmnl2b ENSDARG00000075041 1744 1.786 0.842 - 0.944 - - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
29. CR387996.1 ENSDARG00000097774 3037 1.782 0.793 - - - 0.989 - - - -
30. top2a ENSDARG00000024488 4273 1.78 - 0.984 - - - - - - 0.796 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
31. wu:fb12e11 wu:fb12e11 2332 1.77 0.801 - 0.969 - - - - - -
32. itgb1bp1 ENSDARG00000007169 2723 1.766 0.784 - - - 0.982 - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
33. slc37a2 ENSDARG00000023394 3997 1.744 - - - - 0.981 0.763 - - - solute carrier family 37 (glucose-6-phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1949]
34. sf3a1 ENSDARG00000041887 6702 1.743 - - - - 0.985 0.758 - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
35. tmpoa ENSDARG00000007315 3638 1.735 - 0.992 - - - - 0.743 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
36. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.73 - 0.993 - - - - 0.737 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
37. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.727 - - - - 0.992 - 0.735 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
38. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.726 0.794 - 0.932 - - - - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
39. stm ENSDARG00000035694 1567 1.724 0.784 - 0.940 - - - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
40. atp2b4 5891 1.723 - 0.934 0.789 - - - - - - ATPase, Ca++ transporting, plasma membrane 4
41. LEPROTL1 ENSDARG00000104871 3019 1.721 - - - - 0.978 - 0.743 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
42. fbl ENSDARG00000053912 5891 1.721 0.792 - 0.929 - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
43. tmem33 ENSDARG00000041332 2883 1.713 - - - - 0.982 - - - 0.731 transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
44. MSL1_1 MSL1_1 2365 1.713 - - 0.935 - - - - - 0.778
45. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.713 - - - - 0.995 - - - 0.718 non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
46. rbm25 rbm25 3629 1.703 0.806 - 0.897 - - - - - -
47. ndfip2 ENSDARG00000033928 3129 1.703 - - - - 0.961 - 0.742 - - Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
48. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.7 - - 0.732 - 0.968 - - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
49. safb ENSDARG00000020467 5608 1.697 0.766 - 0.931 - - - - - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
50. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 1.694 0.765 - 0.929 - - - - - - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
51. lsm7 ENSDARG00000058328 7191 1.694 - - 0.867 - 0.827 - - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
52. supt16h ENSDARG00000079949 4755 1.693 0.754 - - - 0.939 - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
53. smc1al ENSDARG00000058203 8838 1.686 - - - - 0.926 - - - 0.760 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
54. dscr3 1229 1.678 0.752 - 0.926 - - - - - - Down syndrome critical region 3
55. gigfy2 3194 1.671 0.740 - 0.931 - - - - - - GRB10 interacting GYF protein 2, transcript variant X1
56. pou3f3a ENSDARG00000042032 2835 1.668 - - 0.900 - - - - - 0.768 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
57. st13 ENSDARG00000021973 7787 1.661 - 0.833 - - - - 0.828 - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
58. acin1a ENSDARG00000054290 14023 1.66 - 0.954 - - - - 0.706 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
59. setd8a 2549 1.656 - - 0.932 - - - - - 0.724 SET domain containing (lysine methyltransferase) 8a
60. setdb1b ENSDARG00000099021 2937 1.656 - - 0.955 - - 0.701 - - - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
61. luc7l ENSDARG00000055903 3357 1.647 0.717 - 0.930 - - - - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
62. nr2f1a ENSDARG00000052695 5037 1.642 - - 0.868 - - - - - 0.774 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
63. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.638 0.707 - 0.931 - - - - - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
64. anp32e ENSDARG00000054804 11017 1.635 - - 0.814 - - - 0.821 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
65. yaf2 ENSDARG00000015966 1905 1.634 - - 0.932 - - - - - 0.702 YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
66. dut ENSDARG00000106529 3120 1.63 - - 0.930 - - - 0.700 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
67. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.625 - - 0.841 - - - 0.784 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
68. tmem50a ENSDARG00000015757 3244 1.623 - - 0.922 - - - 0.701 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
69. etf1 etf1 12861 1.616 - - 0.880 - 0.736 - - - -
70. AP3B2 1874 1.616 - - - - 0.889 - - - 0.727 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
71. pbx2 ENSDARG00000019717 6892 1.608 - - 0.833 - - - 0.775 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
72. rtf1 ENSDARG00000008947 6596 1.607 - - 0.868 - - - - - 0.739 RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
73. zgc:100918 ENSDARG00000087243 5451 1.599 0.741 - 0.858 - - - - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
74. ssbp4 ENSDARG00000056483 10196 1.588 - - 0.887 - - - 0.701 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
75. gpm6bb ENSDARG00000001676 2005 1.582 - - 0.860 - - - - - 0.722 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
76. lypla2 ENSDARG00000053656 8971 1.582 - - 0.841 - - - - - 0.741 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
77. stmn1a ENSDARG00000004169 21169 1.576 - - - - 0.863 - - - 0.713 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
78. gna11a ENSDARG00000010002, ENSDARG00000111208 1303 1.572 0.820 - - - - 0.752 - - - guanine nucleotide binding protein (G protein), alpha 11a (Gq class) [Source:ZFIN;Acc:ZDB-GENE-050208-597]
79. hmgb2b ENSDARG00000053990 11519 1.57 - - - - - - 0.783 - 0.787 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
80. fbxo5 ENSDARG00000039020 1284 1.567 0.775 - - - - - - - 0.792 F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]
81. ankrd54 ENSDARG00000055743 1575 1.554 0.832 - - - - 0.722 - - - ankyrin repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040718-318]
82. mcm5 ENSDARG00000019507 6407 1.553 0.798 - - - - - - - 0.755 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
83. eif3m ENSDARG00000013931 8117 1.54 - - 0.829 - - - 0.711 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
84. TSG101 TSG101 1686 1.539 0.800 - - - - 0.739 - - -
85. ascl1a ENSDARG00000038386 1290 1.537 0.790 - - - - - - - 0.747 achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
86. zgc:91910 ENSDARG00000035678 6172 1.534 0.728 - - - - - 0.806 - - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
87. si:ch211-161h7.4 ENSDARG00000087238 4399 1.528 0.723 - 0.805 - - - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
88. ube2i ube2i 13024 1.518 - - - - 0.721 - 0.797 - -
89. sf1 ENSDARG00000008188 5142 1.515 - - - - - - 0.736 - 0.779 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
90. ppp4r2a ENSDARG00000026540 1782 1.513 0.752 - - 0.761 - - - - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
91. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.506 0.761 - - - - 0.745 - - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
92. Mar-06 Mar-06 953 1.505 0.746 - - - - 0.759 - - -
93. snrpc ENSDARG00000009871 9567 1.505 - - - - - - 0.768 - 0.737 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
94. SNRPG ENSDARG00000099667 18697 1.502 - - - - - - 0.768 - 0.734 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
95. foxk2 ENSDARG00000030583 2982 1.5 0.722 - - - - - - - 0.778 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
96. OMG OMG 1202 1.498 0.795 - - - - 0.703 - - -
97. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.497 - - - - - - 0.715 - 0.782 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
98. fzr1 fzr1 2984 1.497 - - - - - 0.769 - - 0.728
99. smarcd1 ENSDARG00000019004 6028 1.49 0.785 - - - - - 0.705 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
100. hnrnpub ENSDARG00000004735 16496 1.49 - - - - - - 0.701 - 0.789 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]

There are 1223 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA