Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cish

Gene Name Gene ID Reads Annotation
cish ENSDARG00000060316 329 cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]










Genes with expression patterns similar to cish

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cish ENSDARG00000060316 329 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
2. tnfaip8l3 ENSDARG00000088709 345 2.404 0.881 - - - - - 0.750 0.773 - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
3. CU596012.2 CU596012.2 1046 2.33 0.807 - - - - 0.739 0.784 - -
4. CU856207.1 CU856207.1 87 1.748 0.888 - - - - - - 0.860 -
5. ets2 ENSDARG00000103980 451 1.73 - 0.827 - - - - - 0.903 - v-ets avian erythroblastosis virus E26 oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-050522-552]
6. AKR1C1 AKR1C1 32 1.702 - - - - - 0.849 0.853 - -
7. fas ENSDARG00000043586 194 1.699 - - - - - 0.779 - 0.920 - Fas cell surface death receptor [Source:ZFIN;Acc:ZDB-GENE-061019-2]
8. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 1.699 0.854 - - - - - 0.845 - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
9. STARD4 ENSDARG00000102477 411 1.691 0.770 - - - - - - 0.921 - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
10. aggf1 ENSDARG00000060109 574 1.673 - - - - - - 0.866 0.807 - angiogenic factor with G patch and FHA domains 1 [Source:ZFIN;Acc:ZDB-GENE-060929-836]
11. RSPH1 289 1.661 - 0.829 - - - - 0.832 - - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
12. atp1b1a ENSDARG00000013144 19744 1.651 0.832 - - - - - 0.819 - - ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
13. fdx1l 461 1.638 - - - - - 0.734 - 0.904 - ferredoxin 1-like
14. si:dkey-11c5.11 ENSDARG00000096637 130 1.634 - - - - - - 0.721 0.913 - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
15. C8H9orf116 C8H9orf116 379 1.611 - 0.834 - - - - 0.777 - -
16. PXMP4 ENSDARG00000114885 212 1.607 - 0.877 - - - - 0.730 - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
17. sps2 1522 1.607 - - - - - - 0.718 0.889 - selenophosphate synthetase 2
18. kcnj13 ENSDARG00000043443 700 1.586 0.727 - - - - - 0.859 - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
19. AL928724.1 ENSDARG00000097525 421 1.583 0.799 - - - - - 0.784 - -
20. CU695232.1 ENSDARG00000098286 1266 1.582 - - - 0.744 - - - 0.838 - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
21. fzd5 ENSDARG00000025420 1082 1.573 - 0.783 - - - - 0.790 - - frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
22. mtx2 ENSDARG00000029415 2205 1.572 - 0.830 - - - - 0.742 - - metaxin 2 [Source:ZFIN;Acc:ZDB-GENE-021210-2]
23. exosc2 ENSDARG00000028688 726 1.555 - 0.726 - - - - - 0.829 - exosome component 2 [Source:ZFIN;Acc:ZDB-GENE-050417-27]
24. tfeb ENSDARG00000010794 473 1.55 - 0.818 - - - - 0.732 - - transcription factor EB [Source:ZFIN;Acc:ZDB-GENE-090807-3]
25. cobl_1 ENSDARG00000091006 293 1.538 0.766 - - - - - 0.772 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
26. smpd1 ENSDARG00000076121 584 1.534 - - - - - 0.795 - 0.739 - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
27. pax8 ENSDARG00000015879 368 1.531 - - - - - 0.722 0.809 - - paired box 8 [Source:ZFIN;Acc:ZDB-GENE-001030-3]
28. lnx2b ENSDARG00000071478 654 1.531 0.706 0.825 - - - - - - - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
29. atp1a1a.3 ENSDARG00000039131 3267 1.53 0.761 - - - - - 0.769 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-001212-3]
30. cdx1b ENSDARG00000116139 113 1.53 - - - - - 0.744 0.786 - - caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
31. aldh1a2 ENSDARG00000053493, ENSDARG00000113122 1679 1.529 - - - - - 0.783 0.746 - - aldehyde dehydrogenase 1 family, member A2 [Source:ZFIN;Acc:ZDB-GENE-011010-3]
32. znf326 ENSDARG00000098348 133 1.528 - 0.780 - - - 0.748 - - - zinc finger protein 326 [Source:ZFIN;Acc:ZDB-GENE-070424-227]
33. si:ch211-207j7.2 ENSDARG00000090793 316 1.514 - - - - - 0.718 0.796 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
34. bin2a ENSDARG00000003219 1369 1.511 0.810 - - - - 0.701 - - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
35. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 1.495 - - - - - 0.779 0.716 - - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
36. wdr3 ENSDARG00000011079 1403 1.484 - - - - - - 0.709 0.775 - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
37. zgc:171727 ENSDARG00000105781 350 1.483 - 0.712 - - - 0.771 - - - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
38. zgc:101040 ENSDARG00000005176 369 1.483 0.729 - - - - - 0.754 - - zgc:101040 [Source:ZFIN;Acc:ZDB-GENE-040801-107]
39. slc12a3 ENSDARG00000013855 990 1.483 0.726 0.757 - - - - - - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
40. DHX29 ENSDARG00000040326 431 1.478 - - - - - 0.729 0.749 - - DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:ZFIN;Acc:ZDB-GENE-130530-606]
41. ezra ENSDARG00000020944 3105 1.474 0.709 - - - - - 0.765 - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]
42. clcnk ENSDARG00000022560 355 1.47 - 0.710 - - - - 0.760 - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
43. RBM47 ENSDARG00000061985 2498 1.467 - - - - - 0.701 0.766 - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
44. arl6 ENSDARG00000032056, ENSDARG00000113281 238 1.464 - - - - - 0.712 0.752 - - ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
45. si:ch211-238e22.1 si:ch211-238e22.1 1032 1.462 - 0.722 - - - - 0.740 - -
46. paqr6 ENSDARG00000041483 795 1.452 - 0.723 - - - - - 0.729 - progestin and adipoQ receptor family member VI [Source:ZFIN;Acc:ZDB-GENE-090714-1]
47. nop58 ENSDARG00000104353 8497 1.451 - - - - - 0.715 0.736 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
48. fgf24 ENSDARG00000037677 242 1.433 - 0.722 - - - - 0.711 - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
49. tmem88b ENSDARG00000069388 501 1.411 - - - - - 0.709 0.702 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
50. nt5c1a nt5c1a 26 0.964 - - - - - - - 0.964 -
51. atp2b1b ENSDARG00000007788 56 0.955 - - - - - - - 0.955 - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
52. sars2 ENSDARG00000102736 206 0.953 - - - - - 0.953 - - - seryl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-1616]
53. C21HXorf40A C21HXorf40A 216 0.952 - - - - - - - 0.952 -
54. naf1 ENSDARG00000057929, ENSDARG00000110711 426 0.952 - - - - - - - 0.952 - nuclear assembly factor 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4546]
55. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 0.95 - - - - - - - 0.950 - retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
56. ric8a ENSDARG00000007247 229 0.947 - - - - - - - 0.947 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
57. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.946 - - - - - - - 0.946 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
58. slc6a2 ENSDARG00000016141 49 0.946 - - - - - - - 0.946 - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
59. si:dkey-240h12.4 ENSDARG00000034210 114 0.946 - - - - - - - 0.946 - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
60. CYSTM1 CYSTM1 176 0.945 - - - - - - - 0.945 -
61. arr3a ENSDARG00000056511, ENSDARG00000114648 192 0.945 - - - - - - - 0.945 - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
62. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 0.945 - - - - - - - 0.945 - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
63. ETV3L ETV3L 67 0.945 - - - - - - - 0.945 -
64. nrgna ENSDARG00000039626 50 0.944 - - - - - - - 0.944 - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
65. si:ch211-191a16.3 si:ch211-191a16.3 31 0.944 - - - - - - - 0.944 -
66. sagb ENSDARG00000038378 28 0.944 - - - - - - - 0.944 - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
67. rcv1 rcv1 77 0.944 - - - - - - - 0.944 -
68. gngt2b ENSDARG00000103543 132 0.944 - - - - - - - 0.944 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
69. med11 ENSDARG00000086416 13 0.943 - - - - - - - 0.943 - mediator complex subunit 11 [Source:ZFIN;Acc:ZDB-GENE-091207-2]
70. pth2r ENSDARG00000006678, ENSDARG00000112414 46 0.943 - - - - - - - 0.943 - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
71. tph1a ENSDARG00000029432, ENSDARG00000114918 24 0.943 - - - - - - - 0.943 - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
72. gprc5bb ENSDARG00000075141 119 0.943 - - - - - - - 0.943 - G protein-coupled receptor, class C, group 5, member Bb [Source:ZFIN;Acc:ZDB-GENE-090313-75]
73. si:ch211-133l5.5 si:ch211-133l5.5 123 0.943 - - - - - - - 0.943 -
74. RCVRN_1 RCVRN_1 46 0.943 - - - - - - - 0.943 -
75. gnb3b ENSDARG00000002696 46 0.943 - - - - - - - 0.943 - guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
76. CABZ01007222.1 CABZ01007222.1 78 0.942 - - - - - - - 0.942 -
77. faimb ENSDARG00000020814 21 0.942 - - - - - - - 0.942 - Fas apoptotic inhibitory molecule b [Source:ZFIN;Acc:ZDB-GENE-040718-91]
78. TULP1 TULP1 50 0.942 - - - - - - - 0.942 -
79. galnt13 ENSDARG00000099227 1059 0.942 - - - - - - - 0.942 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
80. ZDHHC20_1 ZDHHC20_1 440 0.941 - - - - - - - 0.941 -
81. crim1 ENSDARG00000029668 118 0.941 - - - - - - - 0.941 - cysteine rich transmembrane BMP regulator 1 (chordin-like) [Source:ZFIN;Acc:ZDB-GENE-040312-2]
82. LRRC4C ENSDARG00000113411 36 0.94 - - - - - - - 0.940 - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
83. PEG3 PEG3 644 0.94 - - - - - - - 0.940 -
84. arl3l2 ENSDARG00000015404 39 0.939 - - - - - - - 0.939 - ADP-ribosylation factor-like 3, like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1678]
85. ldhbb ENSDARG00000071076 31 0.939 - - - - - - - 0.939 - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
86. polh ENSDARG00000070231, ENSDARG00000111719 154 0.939 - - - - - - - 0.939 - polymerase (DNA directed), eta [Source:ZFIN;Acc:ZDB-GENE-060421-4949]
87. nom1 ENSDARG00000060027, ENSDARG00000112720 831 0.938 - - - - - - - 0.938 - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
88. ATP8B4 ENSDARG00000079453 147 0.937 0.937 - - - - - - - - ATPase phospholipid transporting 8B4 [Source:ZFIN;Acc:ZDB-GENE-121116-7]
89. CDH12_1 CDH12_1 57 0.937 - - - - - - - 0.937 -
90. tmem251 ENSDARG00000042341 1102 0.937 - - - - - - - 0.937 - transmembrane protein 251 [Source:ZFIN;Acc:ZDB-GENE-041001-121]
91. LRIF1_1 LRIF1_1 228 0.935 - - - - - - - 0.935 -
92. FRRS1 FRRS1 80 0.935 - - - - - - - 0.935 -
93. gnai3 ENSDARG00000030644 29 0.935 - - - - - - - 0.935 - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
94. pdcd2 ENSDARG00000007892 223 0.935 - - - - - - - 0.935 - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
95. DHX36 ENSDARG00000101059 314 0.935 - - - - - - - 0.935 - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
96. CABZ01054405.1 CABZ01054405.1 115 0.935 - - - - - - - 0.935 -
97. zgc:103625 ENSDARG00000038770 17 0.934 - - - - - - - 0.934 - zgc:103625 [Source:ZFIN;Acc:ZDB-GENE-040912-116]
98. cox4i2 ENSDARG00000022509 362 0.934 - - - - - - - 0.934 - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
99. tmem196b ENSDARG00000090140 20 0.934 - - - - - - - 0.934 - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
100. si:dkey-52l6.2 si:dkey-52l6.2 384 0.934 - - - - - - - 0.934 -

There are 942 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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