Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cirh1a

Gene Name Gene ID Reads Annotation
cirh1a 767 cirrhosis, autosomal recessive 1A (cirhin), transcript variant X1










Genes with expression patterns similar to cirh1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cirh1a 767 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cirrhosis, autosomal recessive 1A (cirhin), transcript variant X1
2. crfb5 crfb5 342 1.609 - - - - - - 0.702 0.907 -
3. cyp20a1 ENSDARG00000006040 2570 1.596 - 0.857 - - - - 0.739 - - cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2646]
4. mir199-3 mir199-3 826 1.548 0.744 - - - - - 0.804 - -
5. creg2 ENSDARG00000000666 643 1.541 - 0.712 - - - - - 0.829 - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
6. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.503 - 0.732 - - - - 0.771 - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
7. qpctla ENSDARG00000061691 869 1.46 - - - - - 0.731 - 0.729 - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
8. map7d3 ENSDARG00000060771 1739 1.455 - 0.719 - - - - - 0.736 - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
9. zgc:112263 zgc:112263 473 1.441 - 0.705 - - - 0.736 - - -
10. kita ENSDARG00000043317 1091 1.428 - 0.705 - - - - 0.723 - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-980526-464]
11. si:ch211-207j7.2 ENSDARG00000090793 316 1.428 - 0.715 - - - - 0.713 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
12. mrps5 ENSDARG00000062209, ENSDARG00000114003 619 1.419 0.716 - - - - - 0.703 - - mitochondrial ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-060929-264]
13. CABZ01078431.1 CABZ01078431.1 183 0.932 - - - - - - - 0.932 -
14. atrip ENSDARG00000063076 385 0.931 - - - - - - - 0.931 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
15. rfc5 ENSDARG00000035634 974 0.929 - - - - - 0.929 - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
16. ASPH ENSDARG00000055945 214 0.923 - - - - - - - 0.923 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
17. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 0.918 - - - - - - - 0.918 - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
18. ubr1 ENSDARG00000060480 71 0.915 - - - - - - - 0.915 - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
19. BX511006.2 BX511006.2 29 0.915 - - - - - - - 0.915 -
20. si:dkey-152b24.6 ENSDARG00000105043 39 0.915 - - - - - - - 0.915 - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
21. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.913 - - - - - - - 0.913 - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
22. si:dkey-238g7.2 si:dkey-238g7.2 181 0.912 - - - - - - - 0.912 -
23. GABRR1 ENSDARG00000043902 71 0.911 - - - - - - - 0.911 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
24. ba1 69 0.911 - - - - - - - 0.911 - ba1 globin
25. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.911 - - - - - - - 0.911 - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
26. nphp4 ENSDARG00000069014 77 0.91 - - - - - - - 0.910 - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
27. trmt5 ENSDARG00000069278 228 0.91 - - - - - - - 0.910 - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
28. cacng2a ENSDARG00000032565 99 0.91 - - - - - - - 0.910 - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
29. slc5a3a ENSDARG00000010376 134 0.909 - - - - - - - 0.909 - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
30. CT573468.1 CT573468.1 283 0.909 - - - - - - - 0.909 -
31. srd5a2a ENSDARG00000043587 21 0.909 - - - - - - - 0.909 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
32. KIF21B ENSDARG00000009733 53 0.908 - - - - - - - 0.908 - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
33. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.908 - - - - - - - 0.908 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
34. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.907 - - - - - - - 0.907 - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
35. CR848664.3 CR848664.3 183 0.907 - - - - - - - 0.907 -
36. si:dkey-42p8.3 1117 0.906 - - - - - - - 0.906 - si:dkey-42p8.3, transcript variant X1
37. tmprss13b ENSDARG00000077573 47 0.904 - - - - - - - 0.904 - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
38. bcl3 ENSDARG00000087832 69 0.904 - - - - - - - 0.904 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
39. hoxa11a ENSDARG00000104162 283 0.903 - - - - - - - 0.903 - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
40. gpr137 ENSDARG00000037244 801 0.903 - - - - - - - 0.903 - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
41. MTFP1 210 0.903 - - - - - - - 0.903 - mitochondrial fission process 1
42. sgta ENSDARG00000019941 238 0.902 - - - - - - - 0.902 - small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-8811]
43. pdk1 ENSDARG00000013128 526 0.901 - - - - - - - 0.901 - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
44. nenf ENSDARG00000040192 599 0.9 - - - - - 0.900 - - - neudesin neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-050320-129]
45. mob3c ENSDARG00000043705 306 0.899 - - - - - - - 0.899 - MOB kinase activator 3C [Source:ZFIN;Acc:ZDB-GENE-040704-32]
46. si:ch1073-174d20.2 ENSDARG00000079651 171 0.899 - - - - - - - 0.899 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
47. RHBDF1 RHBDF1 131 0.899 - - - - - - - 0.899 -
48. zgc:171459 ENSDARG00000077248 224 0.899 - - - - - - - 0.899 - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
49. ZBTB8A ENSDARG00000059226 98 0.899 - - - - - - - 0.899 - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
50. lrriq1 ENSDARG00000093781 83 0.898 - - - - - - - 0.898 - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
51. echdc2 ENSDARG00000016607 719 0.898 - - - - - - - 0.898 - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
52. CU469544.1 CU469544.1 219 0.898 - - - - - - - 0.898 -
53. cul1b ENSDARG00000007691 719 0.897 - - - - - - - 0.897 - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
54. wnt9a ENSDARG00000063437 204 0.897 - - - - - - - 0.897 - wingless-type MMTV integration site family, member 9A [Source:ZFIN;Acc:ZDB-GENE-060825-97]
55. GFRAL ENSDARG00000089709 167 0.896 - - - - - - - 0.896 - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
56. ANKLE1 ANKLE1 346 0.895 - - - - - - - 0.895 -
57. myh14 ENSDARG00000073732 502 0.891 - - - - - - - 0.891 - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
58. spop ENSDARG00000100519 177 0.891 - - - - - - - 0.891 - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
59. slc2a15b ENSDARG00000053269 899 0.891 - - - - - - - 0.891 - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
60. nlgn1 ENSDARG00000077710 72 0.89 - - - - - - - 0.890 - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
61. cadps2 ENSDARG00000013312, ENSDARG00000117190 144 0.89 - - - - - - - 0.890 - Ca++-dependent secretion activator 2 [Source:ZFIN;Acc:ZDB-GENE-030903-1]
62. GPR137B GPR137B 50 0.89 - - - - - - - 0.890 -
63. shank3b ENSDARG00000063054 148 0.889 - - - - - - - 0.889 - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
64. zc3h10 ENSDARG00000030335 236 0.889 - - - - - - - 0.889 - zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
65. pbx3a ENSDARG00000089262 97 0.889 - - - - - - - 0.889 - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
66. rxrgb ENSDARG00000004697 332 0.888 - - - - - - - 0.888 - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
67. si:zfos-364h11.1 99 0.888 - - - - - - - 0.888 - si:zfos-364h11.1, transcript variant X4
68. fam8a1 fam8a1 561 0.887 - - - - - - - 0.887 -
69. CPNE8_1 CPNE8_1 140 0.886 - - - - - - - 0.886 -
70. psmd2 ENSDARG00000103190 141 0.886 - - - - - - - 0.886 - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
71. tmem180 tmem180 430 0.885 - - - - - - - 0.885 -
72. BX897726.3 BX897726.3 220 0.885 - - - - - - - 0.885 -
73. phactr2 ENSDARG00000027172 306 0.885 - - - - - - - 0.885 - phosphatase and actin regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040724-11]
74. nmt2 ENSDARG00000021808 510 0.884 - - - - - - - 0.884 - N-myristoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-717]
75. twf1b ENSDARG00000011661 630 0.884 - - - - - - - 0.884 - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
76. CNST CNST 540 0.883 - - - - - - - 0.883 -
77. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.883 - - - - - - - 0.883 - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
78. ovol1 1037 0.882 - - - - - - - 0.882 - ovo-like zinc finger 1, transcript variant X1
79. PHC3 ENSDARG00000074604 239 0.881 - - - - - - - 0.881 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
80. CABZ01027552.1 CABZ01027552.1 760 0.881 - - - - - - - 0.881 -
81. scaper ENSDARG00000023104 491 0.88 - - - - - - - 0.880 - S-phase cyclin A-associated protein in the ER [Source:ZFIN;Acc:ZDB-GENE-060303-5]
82. THEM6_1 ENSDARG00000103914 469 0.88 - - - - - - - 0.880 - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
83. leng1 ENSDARG00000037633 351 0.88 - - - - - - - 0.880 - leukocyte receptor cluster (LRC) member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-159]
84. si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 0.879 - - - - - - - 0.879 - si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]
85. zgc:109744 ENSDARG00000070800 262 0.878 - - - - - - - 0.878 - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
86. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 0.878 - - - - - - - 0.878 - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
87. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.878 - - - - - - - 0.878 - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
88. chkb ENSDARG00000063167 440 0.877 - - - - - - - 0.877 - choline kinase beta [Source:ZFIN;Acc:ZDB-GENE-030131-2928]
89. si:ch211-282k23.2 ENSDARG00000093591 447 0.876 - - - - - - - 0.876 - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
90. blf ENSDARG00000043126 433 0.875 - - - - - - - 0.875 - bloody fingers [Source:ZFIN;Acc:ZDB-GENE-050721-1]
91. trmt10c ENSDARG00000041575 447 0.875 - - - - - - - 0.875 - tRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:ZFIN;Acc:ZDB-GENE-041114-12]
92. cnn1b ENSDARG00000102398 40 0.874 - - - - - - - 0.874 - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
93. zgc:56585 ENSDARG00000026236 704 0.874 - - - - - - - 0.874 - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
94. tnfsf10 ENSDARG00000057241 395 0.872 - - - - - - - 0.872 - TNF superfamily member 10 [Source:ZFIN;Acc:ZDB-GENE-040718-335]
95. rab34b ENSDARG00000010977 590 0.872 - - - - - - - 0.872 - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
96. enthd2 481 0.872 - - - - - 0.872 - - - ENTH domain containing 2
97. kcnc1a ENSDARG00000051852 317 0.871 - - - - - - - 0.871 - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
98. mier1b ENSDARG00000001447 1680 0.87 - - - - - - - 0.870 - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
99. matk ENSDARG00000074670 225 0.869 - - - - - - - 0.869 - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
100. psmg1 ENSDARG00000040620 1359 0.868 - - - - - 0.868 - - - proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]

There are 533 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA