Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cirbp

Gene Name Gene ID Reads Annotation
cirbp cirbp 88363










Genes with expression patterns similar to cirbp

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cirbp cirbp 88363 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.515 - - - 0.797 - 0.969 - 0.749 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
3. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 1.814 - - - 0.853 - - 0.961 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
4. syncrip ENSDARG00000040184 24690 1.772 - - - - - - 0.962 - 0.810 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
5. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 1.705 - - - 0.912 - - - 0.793 - prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
6. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.7 - - - 0.726 - - 0.974 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
7. sox3 ENSDARG00000053569 12016 1.694 - - - 0.893 - - - 0.801 - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
8. khdrbs1a ENSDARG00000052856 53666 1.652 - - - - - - - 0.833 0.819 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
9. AL954137.2 ENSDARG00000114408 104506 1.614 - - - - - - 0.723 0.891 -
10. hmga1a ENSDARG00000028335 254077 1.606 - - - - 0.721 - - 0.885 - high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
11. alyref ENSDARG00000077732 25934 1.599 - - 0.725 0.874 - - - - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
12. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 1.59 - - - - - - - 0.722 0.868
13. pcna ENSDARG00000054155 89521 1.584 0.813 - 0.771 - - - - - - proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
14. seta ENSDARG00000031495 39977 1.539 - - - - - - 0.752 0.787 - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
15. eif5a2 ENSDARG00000056186 43804 1.483 - - 0.705 - - 0.778 - - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
16. khsrp ENSDARG00000026489 15738 1.479 - - 0.711 - - - - 0.768 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
17. dla ENSDARG00000010791 9281 1.478 - - 0.726 - - - - 0.752 - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
18. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 0.97 - - - - - - 0.970 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
19. rpl4 ENSDARG00000041182 18655 0.959 - - - - - - 0.959 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
20. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 0.957 - - - - - - 0.957 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
21. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.957 - - - - - - 0.957 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
22. tegt ENSDARG00000077934 27182 0.957 - - - - - - 0.957 - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
23. f11r f11r 16668 0.955 - - - - - - 0.955 - -
24. hspe1 ENSDARG00000056167 21636 0.955 - - - - - - 0.955 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
25. sdprb sdprb 13647 0.953 - - - - - - 0.953 - -
26. selt2 12741 0.951 - - - - - - 0.951 - - selenoprotein T, 2
27. kpnb1 ENSDARG00000104889 9282 0.95 - - - - - - 0.950 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
28. vbp1 ENSDARG00000030241 10619 0.948 - - - - - - 0.948 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
29. apg3l apg3l 5153 0.948 - - - - - - 0.948 - -
30. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.947 - - - - - - 0.947 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
31. klf11a ENSDARG00000030844 3972 0.947 - - - - - - 0.947 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
32. rpl35 ENSDARG00000018334 69583 0.947 - - - - - - 0.947 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
33. psmb1 ENSDARG00000009640 8628 0.946 - - - - - - 0.946 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
34. CR548630.1 CR548630.1 3301 0.946 - - - - - - 0.946 - -
35. flna ENSDARG00000074201 26242 0.945 - - - - - - 0.945 - - filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
36. fam133b ENSDARG00000013863 5070 0.945 - - - - - - 0.945 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
37. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 0.944 - - - - - - 0.944 - -
38. rhoad rhoad 8007 0.944 - - - - - - 0.944 - -
39. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.944 - - - - - - 0.944 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
40. si:ch211-71n6.4 ENSDARG00000102234 2499 0.943 - - - - - - 0.943 - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
41. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 0.943 - - - - - - 0.943 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
42. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.943 - - - - - - 0.943 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
43. clasp2 ENSDARG00000020345 3382 0.943 - - - - - - 0.943 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
44. mybpc3 ENSDARG00000011615 7271 0.943 - - - - - - 0.943 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
45. sfrp5 ENSDARG00000039041 1777 0.943 - - - - - - 0.943 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
46. CAPN2 CAPN2 1497 0.943 - - - - - - 0.943 - -
47. foxp1a ENSDARG00000004843 3961 0.942 - - - - - - 0.942 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
48. SGPP1 ENSDARG00000060534 1802 0.942 - - - - - - 0.942 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
49. smyd2b ENSDARG00000005629 8181 0.942 - - - - - - 0.942 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
50. SEMA5B SEMA5B 1316 0.941 - - - - - - 0.941 - -
51. tnni1al 8272 0.941 - - - - - - 0.941 - - troponin I, skeletal, slow like, transcript variant X1
52. map7d3 ENSDARG00000060771 1739 0.941 - - - - - - 0.941 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
53. aaas ENSDARG00000102274 1192 0.941 - - - - - - 0.941 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
54. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.94 - - - - - - 0.940 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
55. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 0.936 - - - - - - 0.936 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
56. atp2a1l ENSDARG00000035458 6222 0.935 - - - - - - 0.935 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
57. rpsa ENSDARG00000019181 93440 0.927 - - - - - - 0.927 - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
58. cotl1 ENSDARG00000026829 23295 0.924 - - - - - - 0.924 - - coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
59. hmgn2 ENSDARG00000099572 110168 0.911 - - - - - - - 0.911 - high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
60. rps23 ENSDARG00000021838 145026 0.901 - - - - - - 0.901 - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
61. arnt2 ENSDARG00000103697 5731 0.893 - - - 0.893 - - - - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
62. ssbp3b ENSDARG00000030155 7163 0.893 - - - 0.893 - - - - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
63. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 0.89 - - - 0.890 - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
64. rbpjb ENSDARG00000052091 3122 0.89 - - - 0.890 - - - - - recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
65. arhgap1 ENSDARG00000024324 6904 0.89 - - - 0.890 - - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
66. si:dkeyp-44a8.2 ENSDARG00000092493 8308 0.89 - - - 0.890 - - - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
67. lrp5 ENSDARG00000006921 3522 0.889 - - - 0.889 - - - - - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
68. snrnp70 ENSDARG00000077126 5921 0.889 - - - 0.889 - - - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
69. dennd5a ENSDARG00000017006 3426 0.888 - - - 0.888 - - - - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
70. suz12a ENSDARG00000070256 2229 0.888 - - - 0.888 - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
71. gmps ENSDARG00000079848 8217 0.888 - - - 0.888 - - - - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
72. BX511252.1 BX511252.1 59309 0.888 - - - 0.888 - - - - -
73. hmp19 2554 0.888 - - - 0.888 - - - - - HMP19 protein
74. patl1 ENSDARG00000017423 2744 0.887 - - - 0.887 - - - - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
75. hnrnpab hnrnpab 72354 0.887 - - - - - - - 0.887 -
76. med31 ENSDARG00000008020 4161 0.887 - - - 0.887 - - - - - mediator complex subunit 31 [Source:ZFIN;Acc:ZDB-GENE-040718-114]
77. CR383676.3 CR383676.3 2650 0.887 - - - 0.887 - - - - -
78. myl12.1 ENSDARG00000099766 50993 0.886 - - - - - - 0.886 - - myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
79. ube2g1b ENSDARG00000069527 5376 0.886 - - - 0.886 - - - - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
80. si:dkey-6n6.2 ENSDARG00000058032 1186 0.886 - - - 0.886 - - - - - si:dkey-6n6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-173]
81. map2 ENSDARG00000055052 6062 0.886 - - - 0.886 - - - - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
82. si:ch73-41e3.7 ENSDARG00000089799 911 0.886 - - - 0.886 - - - - - si:ch73-41e3.7 [Source:ZFIN;Acc:ZDB-GENE-090313-163]
83. gcc1 ENSDARG00000045541 1821 0.886 - - - 0.886 - - - - - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
84. wdtc1 ENSDARG00000059760 1218 0.886 - - - 0.886 - - - - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
85. naca ENSDARG00000005513 2745 0.886 - - - 0.886 - - - - - nascent polypeptide associated complex subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020423-4]
86. gatad1 ENSDARG00000027612 1824 0.886 - - - 0.886 - - - - - GATA zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050629-1]
87. PVRL4 1691 0.885 - - - 0.885 - - - - - poliovirus receptor-related 4
88. gna11b ENSDARG00000053326 5118 0.885 - - - 0.885 - - - - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
89. CR352225.2 CR352225.2 1138 0.885 - - - 0.885 - - - - -
90. tmem181 ENSDARG00000045910 2288 0.884 - - - 0.884 - - - - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
91. cltca ENSDARG00000043493, ENSDARG00000115370 12561 0.883 - - - 0.883 - - - - - clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
92. tagln3b ENSDARG00000058394, ENSDARG00000115045 2756 0.883 - - - 0.883 - - - - - transgelin 3b [Source:ZFIN;Acc:ZDB-GENE-030131-4199]
93. grina grina 4656 0.883 - - - 0.883 - - - - -
94. ca6 ENSDARG00000056499, ENSDARG00000110050 3236 0.882 - - - 0.882 - - - - - carbonic anhydrase VI [Source:ZFIN;Acc:ZDB-GENE-030131-7091]
95. dsg2 dsg2 4039 0.881 - - - 0.881 - - - - -
96. dbi ENSDARG00000026369 36552 0.881 - - - - - - 0.881 - - diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
97. CABZ01111496.1 ENSDARG00000003041 15566 0.88 - - - 0.880 - - - - - E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
98. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 0.88 - - - 0.880 - - - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
99. kcnma1a ENSDARG00000079840 2584 0.879 - - - 0.879 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
100. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 0.879 - - - - - - - 0.879 - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]

There are 114 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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