Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ciita

Gene Name Gene ID Reads Annotation
ciita ENSDARG00000090851 5 class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]










Genes with expression patterns similar to ciita

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ciita ENSDARG00000090851 5 7 1.000 - - 1.000 1.000 1.000 1.000 1.000 1.000 class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
2. SOX8 SOX8 22 2 1.000 - - - - 1.000 - - -
3. CU896555.1 CU896555.1 27 2 - - - - - 1.000 1.000 - -
4. ssh1b ENSDARG00000010031 4 2 1.000 - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
5. si:dkey-217m5.3 si:dkey-217m5.3 22 2 1.000 - - - - 1.000 - - -
6. si:dkey-189d19.1 si:dkey-189d19.1 2 2 1.000 - - - 1.000 - - - -
7. si:dkey-78a14.5 14 2 - - - - 1.000 - 1.000 - - si:dkey-78a14.5, transcript variant X2
8. zgc:173652_1 4 2 - - - - - 1.000 - - 1.000 zgc:173652
9. ovca2 ENSDARG00000103748 38 2 1.000 - - - - - 1.000 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
10. btr22 ENSDARG00000100539 137 2 - - - - 1.000 - 1.000 - - bloodthirsty-related gene family, member 22 [Source:ZFIN;Acc:ZDB-GENE-080402-4]
11. FAM177A1 ENSDARG00000079636 19 1.963 1.000 - - - - - 0.963 - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
12. fermt3a fermt3a 56 1.962 1.000 - - - - - 0.962 - -
13. ccr12.2 ccr12.2 2 1.96 - - - - 0.960 - - 1.000 -
14. CU984579.1 ENSDARG00000116863 15 1.956 1.000 - - - - 0.956 - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
15. sts ENSDARG00000053241 10 1.917 - - - - - - 1.000 - 0.917 steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
16. gcdhl gcdhl 38 1.916 - - - 1.000 - - 0.916 - -
17. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 1.912 - - - - 0.912 - 1.000 - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
18. CABZ01080492.1 CABZ01080492.1 495 1.908 1.000 - - - - - 0.908 - -
19. sycp1 ENSDARG00000003904 8 1.877 1.000 - - - - 0.877 - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
20. si:zfos-979f1.2 ENSDARG00000011652 24 1.877 1.000 - - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
21. CT573468.1 CT573468.1 283 1.875 - - - - - - 0.958 - 0.917
22. ddit4 ENSDARG00000037618 37 1.873 - - - - - 1.000 0.873 - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
23. ZSWIM2 ENSDARG00000075700 8 1.869 - - - - - 1.000 - 0.869 - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
24. cpeb1a ENSDARG00000045932 81 1.85 0.915 - - - - - 0.935 - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
25. si:ch211-13o20.1 si:ch211-13o20.1 30 1.85 1.000 - - - - - 0.850 - -
26. GPR180 73 1.845 - - - - - 1.000 0.845 - - G protein-coupled receptor 180, transcript variant X2
27. si:dkey-201i6.5 si:dkey-201i6.5 3 1.84 - - - - 0.840 - 1.000 - -
28. RNF14 ENSDARG00000043905 41 1.838 1.000 - - - - - 0.838 - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
29. CDH7 16 1.83 - - - - 0.953 0.877 - - - cadherin 7, type 2, transcript variant X1
30. si:dkey-14d8.2 38 1.827 - - - - - - 0.910 - 0.917 si:dkey-14d8.2
31. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.822 0.915 - - - - 0.907 - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
32. si:ch73-381a20.2 si:ch73-381a20.2 11 1.816 - - - - 0.864 - 0.952 - -
33. serpine3 ENSDARG00000057108 49 1.777 0.825 - - - - - 0.952 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
34. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1.765 - - - - - - 1.000 - 0.765 sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
35. grid1b ENSDARG00000044161 20 1.762 - - - - 0.762 - 1.000 - - glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]
36. slc7a10b ENSDARG00000051730 44 1.76 - - - 0.814 - - 0.946 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
37. GAS2_1 GAS2_1 16 1.746 - - - 1.000 - 0.746 - - -
38. BX511189.1 BX511189.1 34 1.746 0.746 - - - - - 1.000 - -
39. rft1 ENSDARG00000060398 146 1.745 - - - - - 0.787 0.958 - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
40. dcbld1 ENSDARG00000015907 36 1.739 - - - - - 0.739 1.000 - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
41. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1.736 1.000 - - - - - - - 0.736
42. klf6b ENSDARG00000038561 27 1.733 1.000 - - - - - 0.733 - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
43. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.724 - - - - - 0.724 1.000 - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
44. gpat2 ENSDARG00000053575 12 1.722 - - - 1.000 - - 0.722 - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
45. isg20l2 ENSDARG00000102266 167 1.675 - - - - - 0.747 0.928 - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
46. mgat4a ENSDARG00000063330 3 1.663 0.746 - - - - - - - 0.917 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
47. BX664622.1 ENSDARG00000101754 39 1.659 - - - - - - 0.742 - 0.917
48. si:ch211-93g23.2 ENSDARG00000070558 105 1.65 0.705 - - - - - 0.945 - - si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
49. CABZ01071911.2 CABZ01071911.2 64 1.643 - - - - - 0.722 0.921 - -
50. TP53BP2 TP53BP2 217 1.627 - - - - - 0.814 0.813 - -
51. si:dkey-14o6.7 si:dkey-14o6.7 9 1.591 - - - - 0.855 - - - 0.736
52. CR450814.1 ENSDARG00000096835 137 1.572 0.739 - - - - - 0.833 - -
53. SLC47A1_2 SLC47A1_2 50 1.544 - - - - 0.738 - 0.806 - -
54. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.429 - - - - - 0.725 0.704 - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
55. ftr26 ENSDARG00000092961 1 1 - - - - - - - 1.000 - finTRIM family, member 26 [Source:ZFIN;Acc:ZDB-GENE-070912-316]
56. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 1.000 - - - - - - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
57. CABZ01116714.1 CABZ01116714.1 4 1 - - - - 1.000 - - - -
58. dcun1d5 ENSDARG00000100363 3 1 1.000 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
59. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
60. cyb561 ENSDARG00000038176 55 1 1.000 - - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
61. BX323793.4 BX323793.4 8 1 - - - - - 1.000 - - -
62. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 1.000 - - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
63. mirlet7f 1 1 - - - - - 1.000 - - - microRNA let7f
64. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - - - 1.000 - - - -
65. BX000701.3 BX000701.3 4 1 1.000 - - - - - - - -
66. serpinb1l2 ENSDARG00000070396 37 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
67. gpr155a ENSDARG00000090804 27 1 1.000 - - - - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
68. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - - - 1.000 - -
69. cryba1l2 ENSDARG00000014803 47 1 - - - - - 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
70. clic2 ENSDARG00000010625, ENSDARG00000110125, ENSDARG00000115320 273 1 1.000 - - - - - - - - chloride intracellular channel 2 [Source:ZFIN;Acc:ZDB-GENE-040718-299]
71. si:dkey-117k10.8 si:dkey-117k10.8 17 1 1.000 - - - - - - - -
72. hoxc9a ENSDARG00000092809 18 1 1.000 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
73. si:dkey-263b2.2 si:dkey-263b2.2 1 1 - - - - - 1.000 - - -
74. myo15aa ENSDARG00000075292 29 1 1.000 - - - - - - - - myosin XVAa [Source:ZFIN;Acc:ZDB-GENE-080425-2]
75. ftr43 ENSDARG00000076106 2 1 - - - - - - - 1.000 - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
76. PARM1 ENSDARG00000114063 58 1 1.000 - - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
77. mir196b ENSDARG00000081346 35 1 - - - - - 1.000 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
78. cdc73 ENSDARG00000020201 22 1 1.000 - - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
79. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
80. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 1.000 - - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
81. plekha7a ENSDARG00000060813 179 1 1.000 - - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
82. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
83. si:ch211-160d14.9 8 1 1.000 - - - - - - - - si:ch211-160d14.9, transcript variant X1
84. FP015791.1 FP015791.1 90 1 1.000 - - - - - - - -
85. si:dkey-230i18.1 si:dkey-230i18.1 3 1 1.000 - - - - - - - -
86. dmbx1a ENSDARG00000009922 284 1 1.000 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
87. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1 - - - - - 1.000 - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
88. CR847543.1 ENSDARG00000086708 155 1 1.000 - - - - - - - -
89. ttll5 ENSDARG00000036793 4 1 - - - - - - - - 1.000 tubulin tyrosine ligase-like family, member 5 [Source:ZFIN;Acc:ZDB-GENE-100922-236]
90. gaa ENSDARG00000090714 19 1 1.000 - - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
91. pcsk7 ENSDARG00000069968 5 1 - - - - - - 1.000 - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
92. FMN1_1 FMN1_1 13 1 - - - - - - - 1.000 -
93. arl8 ENSDARG00000094709 6 1 1.000 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
94. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - - - - - - 1.000 - -
95. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - 1.000 - - -
96. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - 1.000 - - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
97. si:ch211-198b21.6 si:ch211-198b21.6 1 1 - - - - - - 1.000 - -
98. AL935184.1 ENSDARG00000070039 1 1 1.000 - - - - - - - -
99. gp1bb ENSDARG00000074441 116 1 1.000 - - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
100. CABZ01006254.1 CABZ01006254.1 95 1 1.000 - - - - - - - -

There are 1196 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA