Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ciita

Gene Name Gene ID Reads Annotation
ciita ENSDARG00000090851 5 class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]










Genes with expression patterns similar to ciita

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ciita ENSDARG00000090851 5 7 1.000 - - 1.000 1.000 1.000 1.000 1.000 1.000 class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
2. si:dkey-189d19.1 si:dkey-189d19.1 2 2 1.000 - - - 1.000 - - - -
3. ovca2 ENSDARG00000103748 38 2 1.000 - - - - - 1.000 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
4. ssh1b ENSDARG00000010031 4 2 1.000 - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
5. SOX8 SOX8 22 2 1.000 - - - - 1.000 - - -
6. zgc:173652_1 4 2 - - - - - 1.000 - - 1.000 zgc:173652
7. btr22 ENSDARG00000100539 137 2 - - - - 1.000 - 1.000 - - bloodthirsty-related gene family, member 22 [Source:ZFIN;Acc:ZDB-GENE-080402-4]
8. CU896555.1 CU896555.1 27 2 - - - - - 1.000 1.000 - -
9. si:dkey-217m5.3 si:dkey-217m5.3 22 2 1.000 - - - - 1.000 - - -
10. si:dkey-78a14.5 14 2 - - - - 1.000 - 1.000 - - si:dkey-78a14.5, transcript variant X2
11. FAM177A1 ENSDARG00000079636 19 1.963 1.000 - - - - - 0.963 - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
12. fermt3a fermt3a 56 1.962 1.000 - - - - - 0.962 - -
13. ccr12.2 ccr12.2 2 1.96 - - - - 0.960 - - 1.000 -
14. CU984579.1 ENSDARG00000116863 15 1.956 1.000 - - - - 0.956 - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
15. sts ENSDARG00000053241 10 1.917 - - - - - - 1.000 - 0.917 steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
16. gcdhl gcdhl 38 1.916 - - - 1.000 - - 0.916 - -
17. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 1.912 - - - - 0.912 - 1.000 - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
18. CABZ01080492.1 CABZ01080492.1 495 1.908 1.000 - - - - - 0.908 - -
19. sycp1 ENSDARG00000003904 8 1.877 1.000 - - - - 0.877 - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
20. si:zfos-979f1.2 ENSDARG00000011652 24 1.877 1.000 - - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
21. CT573468.1 CT573468.1 283 1.875 - - - - - - 0.958 - 0.917
22. ddit4 ENSDARG00000037618 37 1.873 - - - - - 1.000 0.873 - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
23. ZSWIM2 ENSDARG00000075700 8 1.869 - - - - - 1.000 - 0.869 - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
24. si:ch211-13o20.1 si:ch211-13o20.1 30 1.85 1.000 - - - - - 0.850 - -
25. cpeb1a ENSDARG00000045932 81 1.85 0.915 - - - - - 0.935 - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
26. GPR180 73 1.845 - - - - - 1.000 0.845 - - G protein-coupled receptor 180, transcript variant X2
27. si:dkey-201i6.5 si:dkey-201i6.5 3 1.84 - - - - 0.840 - 1.000 - -
28. RNF14 ENSDARG00000043905 41 1.838 1.000 - - - - - 0.838 - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
29. CDH7 16 1.83 - - - - 0.953 0.877 - - - cadherin 7, type 2, transcript variant X1
30. si:dkey-14d8.2 38 1.827 - - - - - - 0.910 - 0.917 si:dkey-14d8.2
31. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.822 0.915 - - - - 0.907 - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
32. si:ch73-381a20.2 si:ch73-381a20.2 11 1.816 - - - - 0.864 - 0.952 - -
33. serpine3 ENSDARG00000057108 49 1.777 0.825 - - - - - 0.952 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
34. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1.765 - - - - - - 1.000 - 0.765 sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
35. grid1b ENSDARG00000044161 20 1.762 - - - - 0.762 - 1.000 - - glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]
36. slc7a10b ENSDARG00000051730 44 1.76 - - - 0.814 - - 0.946 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
37. GAS2_1 GAS2_1 16 1.746 - - - 1.000 - 0.746 - - -
38. BX511189.1 BX511189.1 34 1.746 0.746 - - - - - 1.000 - -
39. rft1 ENSDARG00000060398 146 1.745 - - - - - 0.787 0.958 - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
40. dcbld1 ENSDARG00000015907 36 1.739 - - - - - 0.739 1.000 - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
41. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1.736 1.000 - - - - - - - 0.736
42. klf6b ENSDARG00000038561 27 1.733 1.000 - - - - - 0.733 - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
43. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.724 - - - - - 0.724 1.000 - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
44. gpat2 ENSDARG00000053575 12 1.722 - - - 1.000 - - 0.722 - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
45. isg20l2 ENSDARG00000102266 167 1.675 - - - - - 0.747 0.928 - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
46. mgat4a ENSDARG00000063330 3 1.663 0.746 - - - - - - - 0.917 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
47. BX664622.1 ENSDARG00000101754 39 1.659 - - - - - - 0.742 - 0.917
48. si:ch211-93g23.2 ENSDARG00000070558 105 1.65 0.705 - - - - - 0.945 - - si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
49. CABZ01071911.2 CABZ01071911.2 64 1.643 - - - - - 0.722 0.921 - -
50. TP53BP2 TP53BP2 217 1.627 - - - - - 0.814 0.813 - -
51. si:dkey-14o6.7 si:dkey-14o6.7 9 1.591 - - - - 0.855 - - - 0.736
52. CR450814.1 ENSDARG00000096835 137 1.572 0.739 - - - - - 0.833 - -
53. SLC47A1_2 SLC47A1_2 50 1.544 - - - - 0.738 - 0.806 - -
54. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.429 - - - - - 0.725 0.704 - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
55. BEGAIN BEGAIN 39 1 - - - - - 1.000 - - -
56. mir196b ENSDARG00000081346 35 1 - - - - - 1.000 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
57. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
58. NACC2 160 1 - - - - - - 1.000 - - NACC family member 2
59. upp1 ENSDARG00000040869 2 1 1.000 - - - - - - - - uridine phosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-2]
60. CD97_2 CD97_2 15 1 - - - 1.000 - - - - -
61. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
62. zgc:154055 ENSDARG00000103924 452 1 1.000 - - - - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
63. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - 1.000 - - -
64. myo7bb ENSDARG00000077201 7 1 - - - 1.000 - - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
65. CABZ01085054.1 CABZ01085054.1 20 1 1.000 - - - - - - - -
66. CR457462.1 CR457462.1 11 1 - - - - 1.000 - - - -
67. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
68. BX649431.1 ENSDARG00000098522 13 1 - - - - 1.000 - - - -
69. si:ch211-117m22.2 si:ch211-117m22.2 60 1 1.000 - - - - - - - -
70. si:ch211-10p21.1 si:ch211-10p21.1 6 1 1.000 - - - - - - - -
71. CR388132.1 ENSDARG00000097728 61 1 - - - - - - 1.000 - -
72. si:ch1073-15f19.2 ENSDARG00000095640 4 1 1.000 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
73. ifit2 ifit2 11 1 1.000 - - - - - - - -
74. wfikkn2b ENSDARG00000059139 45 1 - - - - - - 1.000 - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
75. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - 1.000 - - - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
76. AL935184.1 ENSDARG00000070039 1 1 1.000 - - - - - - - -
77. asic2 ENSDARG00000006849 18 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
78. BX470224.1 ENSDARG00000092793 22 1 - - - - - - 1.000 - -
79. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
80. katna1 ENSDARG00000021827 221 1 1.000 - - - - - - - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
81. SLC35A3_1 SLC35A3_1 35 1 - - - - - 1.000 - - -
82. FP565458.1 FP565458.1 61 1 1.000 - - - - - - - -
83. si:dkey-229d2.6 si:dkey-229d2.6 2 1 - - - - - - 1.000 - -
84. tcf23 ENSDARG00000087381 6 1 - - - - - - 1.000 - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
85. si:ch211-219a15.4 ENSDARG00000068951 3 1 1.000 - - - - - - - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
86. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
87. SNORD89 SNORD89 1 1 1.000 - - - - - - - -
88. ucp3 ENSDARG00000091209 137 1 1.000 - - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
89. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - - - 1.000 - - - -
90. rbbp9 ENSDARG00000040713 12 1 - - - - - 1.000 - - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
91. BX571880.1 ENSDARG00000097533 499 1 - - - - - 1.000 - - -
92. nfixa ENSDARG00000043226 14 1 - - - - - 1.000 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
93. EFEMP1_1 EFEMP1_1 8 1 - - - - - - 1.000 - -
94. PLA2G4C_2 PLA2G4C_2 10 1 - - - - - 1.000 - - -
95. ZBTB40 ENSDARG00000091762 57 1 1.000 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
96. OSBP2 ENSDARG00000053487 15 1 1.000 - - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
97. TTC34 ENSDARG00000091221 3 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
98. CU694385.1 CU694385.1 1 1 1.000 - - - - - - - -
99. csrnp1b ENSDARG00000038429 10 1 1.000 - - - - - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
100. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 1 - - - - - - - 1.000 - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]

There are 1196 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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