Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cica

Gene Name Gene ID Reads Annotation
cica ENSDARG00000071150 633 capicua transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-060503-700]










Genes with expression patterns similar to cica

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cica ENSDARG00000071150 633 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 capicua transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-060503-700]
2. col12a1a ENSDARG00000078322 1833 1.621 0.822 - - - - 0.799 - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
3. SGPP1 ENSDARG00000060534 1802 1.571 - 0.854 - - - 0.717 - - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
4. C20H6orf58_1 C20H6orf58_1 216 1.556 0.813 - - - - 0.743 - - -
5. vrk1 ENSDARG00000018006 1759 1.552 - 0.769 - 0.783 - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
6. dhrs7 ENSDARG00000003444 812 1.539 - 0.704 - 0.835 - - - - - dehydrogenase/reductase (SDR family) member 7 [Source:ZFIN;Acc:ZDB-GENE-060825-21]
7. nek6 ENSDARG00000037963 316 1.528 - - - 0.788 - 0.740 - - - NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
8. sox4b ENSDARG00000098834 1634 1.519 - - - - - 0.789 0.730 - - SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
9. dnajc25 ENSDARG00000067613, ENSDARG00000111375 1435 1.506 - 0.754 - 0.752 - - - - - DnaJ (Hsp40) homolog, subfamily C , member 25 [Source:ZFIN;Acc:ZDB-GENE-081104-137]
10. cgnb ENSDARG00000058690 685 1.504 - 0.801 - - - 0.703 - - - cingulin b [Source:ZFIN;Acc:ZDB-GENE-050208-72]
11. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.497 0.724 0.773 - - - - - - - StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
12. CU633775.1 ENSDARG00000113543 319 1.482 0.718 - - 0.764 - - - - -
13. usp6nl ENSDARG00000022187, ENSDARG00000109772 432 0.947 - - - 0.947 - - - - - USP6 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041210-192]
14. tmem136a ENSDARG00000024920 535 0.921 - - - 0.921 - - - - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
15. CU638740.1_1 CU638740.1_1 387 0.92 - - - 0.920 - - - - -
16. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 0.919 - - - 0.919 - - - - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
17. ppargc1b ENSDARG00000101569 3452 0.912 - - - 0.912 - - - - - peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
18. otud6b ENSDARG00000102705 698 0.906 - - - - - 0.906 - - - OTU domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-040426-974]
19. WDR53 ENSDARG00000079659 485 0.903 - - - 0.903 - - - - - WD repeat domain 53 [Source:ZFIN;Acc:ZDB-GENE-131121-294]
20. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 0.891 - - - 0.891 - - - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
21. lrata ENSDARG00000037278, ENSDARG00000112503 1510 0.889 - 0.889 - - - - - - - lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1]
22. mst4 mst4 1672 0.883 - 0.883 - - - - - - -
23. pqbp1 ENSDARG00000029724 1472 0.882 - - - 0.882 - - - - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
24. rpz5 ENSDARG00000075718 1703 0.88 - - - 0.880 - - - - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
25. prickle3 ENSDARG00000073996 840 0.875 - 0.875 - - - - - - - prickle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-081105-86]
26. zgc:171497 ENSDARG00000100614 1040 0.874 - - - 0.874 - - - - - zgc:171497 [Source:ZFIN;Acc:ZDB-GENE-080220-58]
27. tpbga ENSDARG00000099609 1051 0.871 - 0.871 - - - - - - - trophoblast glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-030827-4]
28. sult1st1 ENSDARG00000028275 806 0.868 - - - - - - 0.868 - - sulfotransferase family 1, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2144]
29. lmbrd1 ENSDARG00000104223 924 0.864 - - - 0.864 - - - - - LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
30. pqlc3 ENSDARG00000054251 1039 0.862 - 0.862 - - - - - - - PQ loop repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-40]
31. emc8 ENSDARG00000017093 1947 0.859 - - - 0.859 - - - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
32. commd2 ENSDARG00000003373 540 0.858 - 0.858 - - - - - - - COMM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-118]
33. tfdp1b ENSDARG00000016304 3071 0.853 - 0.853 - - - - - - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
34. kdelc2 ENSDARG00000021408, ENSDARG00000112910 968 0.852 - - - 0.852 - - - - - KDEL (Lys-Asp-Glu-Leu) containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-142]
35. fggy ENSDARG00000038667 535 0.85 - - - - - 0.850 - - - FGGY carbohydrate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-2461]
36. golga7ba ENSDARG00000036295 1460 0.85 - - - 0.850 - - - - - golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
37. rasl11a ENSDARG00000046013 1627 0.849 - - - 0.849 - - - - - RAS-like, family 11, member A [Source:ZFIN;Acc:ZDB-GENE-050417-384]
38. atg13 ENSDARG00000036040 1251 0.849 - 0.849 - - - - - - - ATG13 autophagy related 13 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1149]
39. AL954372.1 ENSDARG00000112499 589 0.849 - - - - - - 0.849 - -
40. tmem135 ENSDARG00000069157 918 0.845 - 0.845 - - - - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
41. gli3 ENSDARG00000052131 986 0.845 - 0.845 - - - - - - - GLI family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-041111-162]
42. impa1 ENSDARG00000003517 1383 0.844 - 0.844 - - - - - - - inositol monophosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-245]
43. pagr1 ENSDARG00000076966 1430 0.843 - 0.843 - - - - - - - PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]
44. im:7148400 im:7148400 787 0.841 - 0.841 - - - - - - -
45. TRIP10 TRIP10 1079 0.841 - - - 0.841 - - - - -
46. atad2b ENSDARG00000060537 3050 0.84 - 0.840 - - - - - - - ATPase family, AAA domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110411-210]
47. sirt2 ENSDARG00000011488 5389 0.839 0.839 - - - - - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
48. rab13 ENSDARG00000034771 3065 0.838 - 0.838 - - - - - - - RAB13, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-30]
49. srebf1 ENSDARG00000067607 1537 0.837 - 0.837 - - - - - - - sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]
50. ogt.2 1166 0.836 - 0.836 - - - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 2, transcript variant X3
51. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 0.836 - - - 0.836 - - - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
52. rprd2a ENSDARG00000058089 743 0.835 - - - 0.835 - - - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
53. napa napa 4444 0.834 - 0.834 - - - - - - -
54. ubald2 ENSDARG00000115335 1056 0.833 - - - - - 0.833 - - - UBA-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-185]
55. fam208b ENSDARG00000074168 2244 0.829 - 0.829 - - - - - - - family with sequence similarity 208, member B [Source:ZFIN;Acc:ZDB-GENE-041111-225]
56. BX296538.3 BX296538.3 813 0.825 - 0.825 - - - - - - -
57. flj11011l ENSDARG00000045360, ENSDARG00000114911 332 0.824 - - - - - 0.824 - - - hypothetical protein FLJ11011-like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-050113-1]
58. rgrb ENSDARG00000098724 1546 0.824 - 0.824 - - - - - - - retinal G protein coupled receptor b [Source:ZFIN;Acc:ZDB-GENE-050522-447]
59. rfx1b ENSDARG00000075904 1175 0.824 - 0.824 - - - - - - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
60. DACT3 DACT3 766 0.823 - 0.823 - - - - - - -
61. prkcda ENSDARG00000009208 1508 0.822 - - - 0.822 - - - - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
62. helz ENSDARG00000030560 3259 0.822 - - - 0.822 - - - - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
63. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 0.821 0.821 - - - - - - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
64. zgc:194398 ENSDARG00000078250 815 0.818 - - - - - 0.818 - - - zgc:194398 [Source:ZFIN;Acc:ZDB-GENE-081022-111]
65. mast4 1164 0.818 - - - 0.818 - - - - - microtubule associated serine/threonine kinase family member 4, transcript variant X6
66. lrrfip2 ENSDARG00000010400 2633 0.817 - - - 0.817 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
67. FP928982.1 FP928982.1 690 0.816 - 0.816 - - - - - - -
68. si:dkey-56e3.3 ENSDARG00000075194 491 0.816 - - - 0.816 - - - - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
69. pdip5 pdip5 2643 0.814 - - - 0.814 - - - - -
70. sun1 ENSDARG00000055350 3622 0.814 - 0.814 - - - - - - - Sad1 and UNC84 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-551]
71. rlf ENSDARG00000063553 1339 0.813 - 0.813 - - - - - - - rearranged L-myc fusion [Source:ZFIN;Acc:ZDB-GENE-050208-257]
72. ubr2 ENSDARG00000070164 3960 0.813 - - - 0.813 - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
73. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 0.813 - - - - - 0.813 - - - isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
74. arhgap17b ENSDARG00000062263 55 0.811 0.811 - - - - - - - - Rho GTPase activating protein 17b [Source:ZFIN;Acc:ZDB-GENE-080220-26]
75. swap70a ENSDARG00000051819 115 0.811 0.811 - - - - - - - - switching B cell complex subunit SWAP70a [Source:ZFIN;Acc:ZDB-GENE-040426-1182]
76. cux2a 493 0.81 - - - 0.810 - - - - - cut-like homeobox 2a
77. acacb ENSDARG00000061994 1886 0.81 - - - - - - 0.810 - - acetyl-CoA carboxylase beta [Source:ZFIN;Acc:ZDB-GENE-060526-132]
78. ZFAT ENSDARG00000077987 205 0.808 - - - - - - 0.808 - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
79. zgc:112496 ENSDARG00000004274 1258 0.808 - 0.808 - - - - - - - zgc:112496 [Source:ZFIN;Acc:ZDB-GENE-050320-25]
80. tmem176l.1 ENSDARG00000099491 860 0.807 - - - - - 0.807 - - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
81. si:ch211-282j22.3 ENSDARG00000010524 1007 0.806 - 0.806 - - - - - - - si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
82. CYYR1 ENSDARG00000103783 4107 0.806 - - - 0.806 - - - - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
83. lcp1 ENSDARG00000023188 298 0.806 - - - - - 0.806 - - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
84. Metazoa_SRP_7 Metazoa_SRP_7 513 0.805 - - - - - - 0.805 - -
85. CR385081.1 CR385081.1 177 0.805 0.805 - - - - - - - -
86. tmed7 ENSDARG00000046022 2435 0.804 - - - 0.804 - - - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
87. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 0.804 - - - 0.804 - - - - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
88. inpp5f ENSDARG00000061437 1228 0.804 - 0.804 - - - - - - - inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
89. kxd1 ENSDARG00000051934 828 0.803 - - - - - 0.803 - - - KxDL motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-207]
90. mrpl44 ENSDARG00000094277 1778 0.803 - - - 0.803 - - - - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
91. TSG101_1 TSG101_1 1215 0.802 - 0.802 - - - - - - -
92. dhrs11b ENSDARG00000031299 409 0.801 0.801 - - - - - - - - dehydrogenase/reductase (SDR family) member 11b [Source:ZFIN;Acc:ZDB-GENE-040625-155]
93. man1b1 man1b1 3294 0.8 - - - - - 0.800 - - -
94. trnau1apa ENSDARG00000101323 911 0.799 - - - 0.799 - - - - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
95. stx2b ENSDARG00000068217 2567 0.799 - 0.799 - - - - - - - syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]
96. rc3h1 rc3h1 1087 0.799 - 0.799 - - - - - - -
97. col4a3bpa ENSDARG00000024325, ENSDARG00000110459 716 0.799 - 0.799 - - - - - - - collagen, type IV, alpha 3 (Goodpasture antigen) binding protein a [Source:ZFIN;Acc:ZDB-GENE-080724-10]
98. KIF4A KIF4A 3322 0.799 - 0.799 - - - - - - -
99. SVIL SVIL 2589 0.798 - - - - - 0.798 - - -
100. ptpn23a ENSDARG00000070124 1206 0.798 - 0.798 - - - - - - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]

There are 567 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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