Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cib1

Gene Name Gene ID Reads Annotation
cib1 ENSDARG00000103118 291 calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]










Genes with expression patterns similar to cib1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cib1 ENSDARG00000103118 291 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
2. actr5 ENSDARG00000098235 237 2.539 0.991 - - - - 0.740 - - 0.808 ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
3. KCTD14 ENSDARG00000110240 122 2.488 - 0.913 - - 0.717 0.858 - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
4. hspbp1 ENSDARG00000102937 260 2.444 0.944 - - - 0.717 0.783 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
5. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 2.33 0.859 - - - - 0.721 - - 0.750 si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
6. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.896 0.946 0.950 - - - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
7. RNF5 ENSDARG00000075606 1730 1.894 0.983 - - - - 0.911 - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
8. zbtb4 ENSDARG00000105255 362 1.887 0.920 0.967 - - - - - - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
9. mto1 ENSDARG00000055679 859 1.84 0.971 0.869 - - - - - - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
10. pdk1 ENSDARG00000013128 526 1.834 0.923 0.911 - - - - - - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
11. ZC3H12A_1 ZC3H12A_1 558 1.826 0.935 0.891 - - - - - - -
12. swt1 ENSDARG00000094010 472 1.824 0.982 - - - - - 0.842 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
13. sec22a ENSDARG00000078328 1207 1.816 0.903 0.913 - - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
14. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.813 0.992 0.821 - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
15. Metazoa_SRP_7 Metazoa_SRP_7 513 1.804 0.908 0.896 - - - - - - -
16. wu:fd14a06 wu:fd14a06 243 1.799 - 0.957 - - - - 0.842 - -
17. chmp3 ENSDARG00000038064 577 1.795 0.947 - - - - 0.848 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
18. alad ENSDARG00000100372 1711 1.79 0.883 - - - - 0.907 - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
19. EPS8L2 ENSDARG00000058108 484 1.789 0.983 - - - - - 0.806 - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
20. ptgs2a ENSDARG00000004539 1207 1.786 - 0.905 - - - 0.881 - - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
21. MAP3K6 MAP3K6 181 1.778 0.948 - - - - 0.830 - - -
22. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 1.766 0.917 0.849 - - - - - - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
23. C2H7orf25 C2H7orf25 209 1.763 0.993 - - - - - 0.770 - -
24. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.76 0.909 - - - - 0.851 - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
25. pycr1 pycr1 1258 1.753 0.993 - - - - 0.760 - - -
26. ankrd10b ENSDARG00000004771 654 1.753 0.975 - - - - 0.778 - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
27. rhov ENSDARG00000070434 808 1.748 0.976 0.772 - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
28. pi4kaa ENSDARG00000076724 1949 1.735 0.888 - - - - - 0.847 - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
29. si:ch211-11n16.2 ENSDARG00000099779 417 1.723 - 0.966 - - - - 0.757 - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
30. si:dkey-169i5.4 ENSDARG00000077862 511 1.719 0.932 - - - - - 0.787 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
31. rnf11a ENSDARG00000010442 592 1.713 0.975 - - - - 0.738 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
32. tnfrsf1a ENSDARG00000018569 842 1.712 0.933 - - - - - 0.779 - - tumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]
33. iah1 ENSDARG00000015765 326 1.711 0.975 - - - - 0.736 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
34. prelid1b ENSDARG00000044169 501 1.708 - 0.927 - - - 0.781 - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
35. si:ch211-149b19.3 ENSDARG00000076011 306 1.707 - 0.941 - - 0.766 - - - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
36. leo1 ENSDARG00000055357 1644 1.705 0.900 - - - - - 0.805 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
37. gpcpd1 ENSDARG00000016011 2563 1.705 0.912 0.793 - - - - - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
38. sp8a ENSDARG00000011870 1075 1.703 0.966 0.737 - - - - - - - sp8 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-9849]
39. TRIM14 TRIM14 1424 1.696 0.924 0.772 - - - - - - -
40. itgb1b.2 ENSDARG00000022689 523 1.696 - 0.984 - - - - 0.712 - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
41. ARHGAP23 ARHGAP23 3946 1.695 - 0.878 - - - 0.817 - - -
42. fbln2 ENSDARG00000015156 1694 1.694 - 0.870 - - - 0.824 - - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
43. bmpr1ba ENSDARG00000104100 828 1.694 0.939 0.755 - - - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
44. lrrfip2 ENSDARG00000010400 2633 1.694 0.813 0.881 - - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
45. map2k2a ENSDARG00000006609 856 1.692 0.889 0.803 - - - - - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
46. nme6 ENSDARG00000016138 207 1.689 - 0.906 - - - 0.783 - - - NME/NM23 nucleoside diphosphate kinase 6 [Source:ZFIN;Acc:ZDB-GENE-000710-3]
47. fam129ba ENSDARG00000062970 1578 1.689 0.924 0.765 - - - - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
48. ca16b ENSDARG00000060123 389 1.688 - 0.955 - - - 0.733 - - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
49. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.686 0.954 - - - - 0.732 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
50. glipr2l ENSDARG00000016837 440 1.683 0.913 - - - - 0.770 - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
51. vps39 ENSDARG00000074471 684 1.678 - 0.869 - - - 0.809 - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
52. WNT7A WNT7A 320 1.675 - 0.930 - - 0.745 - - - -
53. loxl2b ENSDARG00000044074 1919 1.674 0.783 0.891 - - - - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
54. paip2b ENSDARG00000008706 4255 1.673 0.914 - - - - - 0.759 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
55. zgc:136892 ENSDARG00000069505 365 1.665 - 0.913 - - 0.752 - - - - zgc:136892 [Source:ZFIN;Acc:ZDB-GENE-060421-4745]
56. mob3a ENSDARG00000019113 2551 1.66 0.891 - - - - - 0.769 - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
57. optn ENSDARG00000002663, ENSDARG00000111364 1440 1.658 - 0.854 - - - - 0.804 - - optineurin [Source:ZFIN;Acc:ZDB-GENE-030131-8103]
58. zdhhc6 ENSDARG00000075721 1494 1.652 - 0.947 - - - 0.705 - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
59. CABZ01062083.1 CABZ01062083.1 40 1.642 - - - - 0.820 0.822 - - -
60. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 1.64 - 0.918 - - - - 0.722 - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
61. surf1 ENSDARG00000003592 551 1.635 0.714 0.921 - - - - - - - surfeit 1 [Source:ZFIN;Acc:ZDB-GENE-041108-2]
62. dgat1b ENSDARG00000054914 119 1.629 - - - - - 0.827 0.802 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
63. hdac6 ENSDARG00000008384 144 1.626 - 0.914 - - 0.712 - - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
64. atpv0e1 atpv0e1 1957 1.623 0.738 - - - - - 0.885 - -
65. dctn4 ENSDARG00000023988 860 1.617 - 0.877 - - - 0.740 - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
66. pi4k2b ENSDARG00000013881 1337 1.616 0.898 - - - - 0.718 - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
67. ino80db ENSDARG00000062226 504 1.613 - 0.856 - - - - 0.757 - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
68. MLLT1 MLLT1 349 1.6 - - - - - 0.745 0.855 - -
69. zgc:112038 ENSDARG00000046140 73 1.599 - - - - - - 0.826 - 0.773 zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
70. psma4 ENSDARG00000045928 5112 1.598 0.857 - - - - 0.741 - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
71. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.598 0.860 0.738 - - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
72. wdr91 ENSDARG00000015153 388 1.595 - - - - - 0.852 0.743 - - WD repeat domain 91 [Source:ZFIN;Acc:ZDB-GENE-050113-2]
73. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 1.595 - - - - - - 0.768 - 0.827 potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
74. tubg1 ENSDARG00000015610 2433 1.592 - 0.867 - - - 0.725 - - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
75. casc3 ENSDARG00000029911 1174 1.592 - 0.783 - - - 0.809 - - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
76. irs1 ENSDARG00000054087 1809 1.591 - 0.828 - - - - 0.763 - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
77. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 1.581 0.767 - - - - 0.814 - - - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
78. herpud1 ENSDARG00000024314 1207 1.577 0.870 0.707 - - - - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
79. POR POR 973 1.576 0.789 - - - - - - - 0.787
80. mpv17 ENSDARG00000032431 1225 1.574 0.820 0.754 - - - - - - - MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
81. bub1bb ENSDARG00000074927 1667 1.573 - 0.778 - - - 0.795 - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
82. sirt3 ENSDARG00000035819 101 1.568 - - - - 0.784 - 0.784 - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
83. CPAMD8 ENSDARG00000056530 3481 1.568 0.753 0.815 - - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
84. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.568 0.853 - - - - 0.715 - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
85. ARFGAP1 ENSDARG00000101616 2952 1.565 - 0.854 - - - 0.711 - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
86. IL17RD ENSDARG00000098359 2309 1.559 0.848 - - - - - 0.711 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
87. KIAA0355 3250 1.554 0.741 0.813 - - - - - - - KIAA0355 ortholog, transcript variant X1
88. trim35-28 ENSDARG00000021021 1380 1.552 - - - - - 0.772 0.780 - - tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
89. sh3gl1a ENSDARG00000067958 1105 1.548 - - - - - 0.767 0.781 - - SH3-domain GRB2-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4524]
90. ATOX1 ENSDARG00000087693 4016 1.542 - 0.838 - - - - - - 0.704 antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
91. c1galt1b ENSDARG00000055561, ENSDARG00000113870 1795 1.541 - 0.792 - - - 0.749 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9075]
92. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.541 - 0.798 - - - - 0.743 - - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
93. FHOD3 FHOD3 422 1.54 - 0.755 - - - - 0.785 - -
94. si:ch211-241e1.5 ENSDARG00000008906 70 1.538 - - - - 0.772 0.766 - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
95. SLC25A24 ENSDARG00000008568 2005 1.534 - - - - - 0.804 0.730 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
96. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.531 0.750 - - - - 0.781 - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
97. si:ch211-212g7.6 ENSDARG00000079369 707 1.527 - 0.784 - - - 0.743 - - - si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
98. C8H1orf194 C8H1orf194 111 1.524 - - - - 0.715 0.809 - - -
99. sf3b3_1 ENSDARG00000103553 1191 1.523 - 0.818 - - - 0.705 - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
100. lypd6b ENSDARG00000077643 650 1.519 - 0.813 - - - - 0.706 - - LY6/PLAUR domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-050522-38]

There are 1924 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA