Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chtopa

Gene Name Gene ID Reads Annotation
chtopa ENSDARG00000057234 3287 chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]










Genes with expression patterns similar to chtopa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chtopa ENSDARG00000057234 3287 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
2. smim8 ENSDARG00000071040 622 2.35 - - - - - 0.768 0.767 - 0.815 small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
3. gstm gstm 4064 2.318 0.725 - - - - 0.782 - - 0.811
4. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 2.28 - 0.716 - - - - 0.755 - 0.809 vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
5. snrpf ENSDARG00000105037 10241 2.194 - 0.755 - - - - 0.737 - 0.702 small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
6. ccdc25 ENSDARG00000021753 3837 1.885 - - - 0.994 - 0.891 - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
7. cahz ENSDARG00000011166 5771 1.813 - 0.878 - 0.935 - - - - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
8. arf6b ENSDARG00000052928 4585 1.812 - - - 0.989 - - - - 0.823 ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
9. yy1a ENSDARG00000042796 4982 1.802 - 0.819 - 0.983 - - - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
10. stip1 ENSDARG00000004906 7742 1.801 - - - 0.994 0.807 - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
11. bcar1 ENSDARG00000056525 6563 1.78 - - - 0.983 - 0.797 - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
12. hmbsb ENSDARG00000055991 3037 1.772 - 0.807 - 0.965 - - - - - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
13. drap1 ENSDARG00000041203 6749 1.769 - 0.775 - 0.994 - - - - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
14. lrpprc ENSDARG00000043970 3847 1.765 - 0.783 - 0.982 - - - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
15. tfam ENSDARG00000063145 4524 1.759 - - - 0.981 - 0.778 - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
16. anapc16 ENSDARG00000013822 5857 1.753 - - - 0.961 - 0.792 - - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
17. ccar1 ENSDARG00000074759, ENSDARG00000114899 1329 1.722 - - - 0.995 - - 0.727 - - cell division cycle and apoptosis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-146]
18. tspan18b ENSDARG00000015015 1433 1.72 - - - 0.994 - 0.726 - - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
19. phax ENSDARG00000044298 2302 1.713 - 0.725 - 0.988 - - - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
20. prep ENSDARG00000057151 3016 1.699 - 0.710 - 0.989 - - - - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
21. sdprb sdprb 13647 1.699 - - - 0.952 - - - - 0.747
22. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.672 - - - - - 0.833 0.839 - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
23. u2surp ENSDARG00000061490 2814 1.66 - - - - - - - 0.776 0.884 U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
24. CACUL1 ENSDARG00000021885 691 1.653 - - - - - 0.803 - - 0.850 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
25. med31 ENSDARG00000008020 4161 1.653 - - - - - 0.806 0.847 - - mediator complex subunit 31 [Source:ZFIN;Acc:ZDB-GENE-040718-114]
26. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.644 - - - - - 0.819 0.825 - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
27. schip1 ENSDARG00000035175 3838 1.633 - - - - - - 0.741 - 0.892 schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
28. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.626 - 0.772 - - - - - - 0.854 RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
29. slc12a9 ENSDARG00000060366 293 1.625 - - - - - 0.796 - - 0.829 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
30. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.622 - - - - - 0.850 - - 0.772 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
31. sf3b5 ENSDARG00000016855 4015 1.621 - 0.761 - - - - - 0.860 - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
32. stxbp2 ENSDARG00000007603 1646 1.62 - - - - - 0.807 - - 0.813 syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
33. hbae1 14666 1.619 - 0.907 - 0.712 - - - - - hemoglobin, alpha embryonic 1
34. si:ch211-183d21.1 ENSDARG00000092499 1071 1.614 - 0.813 - - - 0.801 - - - si:ch211-183d21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-8516]
35. actr1 ENSDARG00000011611 3879 1.612 - - - - - - 0.726 - 0.886 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
36. nedd8 ENSDARG00000007989 3896 1.61 - - - - - 0.750 - - 0.860 neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
37. brd7 ENSDARG00000008380 3654 1.609 - 0.841 - - - - - - 0.768 bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
38. hk1 ENSDARG00000039452, ENSDARG00000110447, ENSDARG00000112051 5026 1.605 - - - - - - 0.735 - 0.870 hexokinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2848]
39. ptpn1 ENSDARG00000007923 3647 1.602 - 0.743 - - - - - - 0.859 protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
40. cldnb ENSDARG00000009544 6036 1.594 - - - - - 0.821 - - 0.773 claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
41. tns1 tns1 5891 1.591 - 0.768 - - - 0.823 - - -
42. twistnb ENSDARG00000024416 1077 1.588 - 0.745 - - - - - - 0.843 TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
43. mrpl14 ENSDARG00000068886 1991 1.584 - - - - - 0.759 - - 0.825 mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
44. mif ENSDARG00000071336 1328 1.582 - 0.804 - - - 0.778 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
45. cnot8 ENSDARG00000020043 866 1.58 - - - - - 0.820 0.760 - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
46. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.576 - 0.843 - - - 0.733 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
47. slc6a19b ENSDARG00000056719 140 1.569 - - - - - 0.754 - - 0.815 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
48. krr1 ENSDARG00000011246 1624 1.563 - 0.758 - - - - 0.805 - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
49. sars ENSDARG00000008237 3330 1.563 0.760 0.803 - - - - - - - seryl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040831-1]
50. pdzd2 ENSDARG00000059801, ENSDARG00000109983 1634 1.56 - - - - - - - 0.715 0.845 PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-297]
51. pno1 ENSDARG00000008502 4547 1.554 - 0.813 - - - - 0.741 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
52. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 1.553 - 0.832 0.721 - - - - - - ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
53. zfand3 ENSDARG00000052833 2682 1.548 - - - - - - - 0.808 0.740 zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
54. stk10 ENSDARG00000101894 1587 1.547 - - - - - 0.729 - - 0.818 serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
55. hsd17b10 ENSDARG00000017781 1793 1.544 0.786 0.758 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
56. apc ENSDARG00000058868 2605 1.54 - 0.786 - - - - 0.754 - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
57. GPR161 ENSDARG00000055659 1067 1.539 - 0.785 - - - 0.754 - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
58. hoxa9a ENSDARG00000105013 1509 1.538 - 0.790 - - - - - - 0.748 homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
59. ptrhd1 ENSDARG00000016122 2705 1.538 - 0.793 - - - 0.745 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
60. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.533 - - - - - 0.705 - - 0.828 cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
61. eif2s3 ENSDARG00000008292 17051 1.533 0.739 0.794 - - - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
62. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.529 - - - - - 0.738 - - 0.791 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
63. si:ch211-150o23.2 ENSDARG00000092746 788 1.528 - 0.700 - - - 0.828 - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
64. srpk3 ENSDARG00000005916 1546 1.527 - 0.763 - - - 0.764 - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
65. sptb ENSDARG00000030490 7128 1.526 0.721 0.805 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
66. mastl ENSDARG00000055566 1487 1.522 - 0.744 - - - - - - 0.778 microtubule associated serine/threonine kinase-like [Source:ZFIN;Acc:ZDB-GENE-040801-128]
67. bc2 5213 1.521 - - - - - 0.815 - - 0.706 putative breast adenocarcinoma marker
68. cenpe ENSDARG00000063385 4428 1.518 - - - - - 0.771 0.747 - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
69. CABZ01084815.1 CABZ01084815.1 351 1.517 - 0.741 - - - 0.776 - - -
70. oxsr1b ENSDARG00000027500 1324 1.515 - 0.716 - - - 0.799 - - - oxidative stress responsive 1b [Source:ZFIN;Acc:ZDB-GENE-040426-723]
71. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 1.511 - - - - - 0.713 - - 0.798 si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
72. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.511 0.712 0.799 - - - - - - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
73. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1.507 - 0.740 - - - 0.767 - - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
74. fgfbp1 fgfbp1 445 1.505 - 0.732 - - - 0.773 - - -
75. si:ch211-242b18.1 ENSDARG00000054723 2929 1.502 0.755 0.747 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
76. tuft1b ENSDARG00000071010 909 1.5 - - - - - 0.726 - - 0.774 tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
77. bcas2 ENSDARG00000043631 1971 1.497 - 0.743 - - - 0.754 - - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
78. knop1 ENSDARG00000077721 2198 1.49 - 0.744 - - - 0.746 - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
79. midn ENSDARG00000018524 7559 1.487 - 0.737 - - - - 0.750 - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
80. txnl1 ENSDARG00000011921 692 1.486 - - - - - 0.705 0.781 - - thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
81. pip5k1ab ENSDARG00000024642 1988 1.484 - 0.705 - - - 0.779 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
82. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.482 0.771 0.711 - - - - - - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
83. MIB1 ENSDARG00000102184 3285 1.481 - 0.748 - - - - 0.733 - - mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
84. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.475 - 0.704 - - - 0.771 - - - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
85. elp5 ENSDARG00000067918 541 1.475 0.751 - - - - 0.724 - - - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
86. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.47 - 0.717 - 0.753 - - - - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
87. cmip ENSDARG00000062933 4521 1.466 - 0.735 - - - 0.731 - - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
88. hmgb3b ENSDARG00000006408 3442 1.466 - 0.742 - - - 0.724 - - - high mobility group box 3b [Source:ZFIN;Acc:ZDB-GENE-050417-290]
89. mesdc2 776 1.461 - 0.712 - - - 0.749 - - - mesoderm development candidate 2, transcript variant X2
90. cct6a ENSDARG00000021252 33641 1.46 - - - 0.742 - 0.718 - - - chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
91. ubr5 ENSDARG00000018192 9267 1.459 - 0.734 - - - - 0.725 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
92. BX088524.2 ENSDARG00000103268 564 1.459 - 0.742 - - - - - 0.717 -
93. si:dkey-13i19.8 ENSDARG00000093058 4617 1.458 - 0.747 - - - 0.711 - - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
94. agk ENSDARG00000009837, ENSDARG00000113514 811 1.452 0.713 0.739 - - - - - - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
95. flrt3 ENSDARG00000076895 3516 1.45 0.705 0.745 - - - - - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
96. podxl ENSDARG00000031228 1744 1.45 - 0.701 - - - - - - 0.749 podocalyxin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2805]
97. mef2ca ENSDARG00000029764 18547 1.449 - 0.704 - 0.745 - - - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
98. fat1 fat1 3934 1.438 - 0.709 - - - - 0.729 - -
99. ercc2 ENSDARG00000021985 678 1.429 - - - - - - 0.712 0.717 - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
100. supt16h ENSDARG00000079949 4755 1.426 - 0.709 - - - - 0.717 - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]

There are 1683 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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