Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chst1

Gene Name Gene ID Reads Annotation
chst1 ENSDARG00000088593, ENSDARG00000112011 102 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]










Genes with expression patterns similar to chst1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chst1 ENSDARG00000088593, ENSDARG00000112011 102 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
2. PARP6 PARP6 119 2.445 - 1.000 - - - 0.703 0.742 - -
3. RFFL_1 RFFL_1 157 2.192 - 0.731 - - - - 0.743 0.718 -
4. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.962 - 1.000 - - - 0.962 - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
5. mstnb ENSDARG00000069133 3 1.956 - 1.000 - - - 0.956 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
6. TENM2 ENSDARG00000037122 48 1.956 - 1.000 - - - 0.956 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
7. si:ch211-232k18.2 si:ch211-232k18.2 2 1.956 - 1.000 - - - 0.956 - - -
8. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.956 - 1.000 - - - 0.956 - - -
9. akt3a_1 ENSDARG00000104810 12 1.956 - 1.000 - - - 0.956 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
10. gphnb ENSDARG00000100851 118 1.886 - 1.000 - - - 0.886 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
11. grm2a ENSDARG00000004150 64 1.87 - 1.000 - - - - 0.870 - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
12. si:dkey-156m18.1 si:dkey-156m18.1 13 1.852 - 0.896 - - - 0.956 - - -
13. slitrk3b ENSDARG00000074739 19 1.842 0.842 - - - - 1.000 - - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
14. MAP3K2 ENSDARG00000062884 34 1.842 0.842 - - - - 1.000 - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
15. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.829 - 1.000 - - - 0.829 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
16. gdf10a ENSDARG00000095378 12 1.823 - 1.000 - - - 0.823 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
17. si:rp71-1f1.4 ENSDARG00000092476 11 1.823 - 1.000 - - - 0.823 - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
18. ME1 ENSDARG00000053215 8 1.8 - 1.000 - - - - 0.800 - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
19. hes2.2 ENSDARG00000068168 197 1.791 0.791 1.000 - - - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
20. lhfpl3 ENSDARG00000021595 107 1.777 0.937 - - - - 0.840 - - - LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
21. nmnat2 ENSDARG00000004580 370 1.775 - 0.948 - - - - 0.827 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
22. EGR4 ENSDARG00000077799 34 1.765 0.839 - - - - - 0.926 - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
23. rnf207b ENSDARG00000012409, ENSDARG00000116638 139 1.76 - 1.000 - - - - 0.760 - - ring finger protein 207b [Source:ZFIN;Acc:ZDB-GENE-080227-9]
24. GADD45G GADD45G 382 1.757 - 1.000 - - - 0.757 - - -
25. ela3l ENSDARG00000007276 11 1.756 - - - - - 0.956 0.800 - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
26. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.756 - - - - - 0.956 0.800 - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
27. shisa4 ENSDARG00000006307, ENSDARG00000112041 109 1.753 - - - - - 0.897 0.856 - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
28. lingo1b ENSDARG00000035899 86 1.743 - - - - - 0.968 - 0.775 - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
29. fstl5 ENSDARG00000040198 213 1.741 - 1.000 - - - 0.741 - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
30. sprn ENSDARG00000056004 128 1.739 - 1.000 - - - - - 0.739 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
31. foxg1d ENSDARG00000070053 32 1.735 - 1.000 - - - - - 0.735 - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
32. ltk ENSDARG00000042861, ENSDARG00000116109 76 1.728 0.728 1.000 - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
33. RGS9BP ENSDARG00000086756 65 1.728 0.728 1.000 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
34. l3mbtl3 ENSDARG00000025983 12 1.728 0.728 1.000 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
35. fbxo41 ENSDARG00000078908 95 1.728 - 1.000 - - - - 0.728 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
36. rs1 rs1 70 1.728 0.728 1.000 - - - - - - -
37. arhgef3 ENSDARG00000013834 3 1.728 0.728 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
38. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.726 - 1.000 - - - - - 0.726 - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
39. GPR137B GPR137B 50 1.709 - - - - - 0.967 0.742 - -
40. BX000430.1 ENSDARG00000112057 135 1.708 - 1.000 - - - 0.708 - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
41. si:dkeyp-77h1.4 ENSDARG00000058248 54 1.704 - 0.704 - - - 1.000 - - - si:dkeyp-77h1.4 [Source:ZFIN;Acc:ZDB-GENE-050208-18]
42. cxxc4 ENSDARG00000077817 197 1.702 - - - - - 0.965 0.737 - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
43. zgc:174224_2 ENSDARG00000093875 22 1.698 - 0.731 - - - 0.967 - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
44. st18 663 1.696 0.917 - - - - - - 0.779 - suppression of tumorigenicity 18, zinc finger
45. lrrc4.2 ENSDARG00000003020 235 1.688 - 0.908 - - - - 0.780 - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
46. BRSK2_2 BRSK2_2 3 1.684 0.728 - - - - 0.956 - - -
47. trhra ENSDARG00000076546 3 1.684 0.728 - - - - 0.956 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
48. cntnap5b ENSDARG00000075189 16 1.68 - 0.713 - - - 0.967 - - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
49. GALNT16 ENSDARG00000053190 250 1.677 0.804 0.873 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
50. dnm1a ENSDARG00000010042 43 1.674 0.791 0.883 - - - - - - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
51. si:ch73-239k17.1 si:ch73-239k17.1 44 1.671 - 0.704 - - - 0.967 - - -
52. mapre3a ENSDARG00000020231 100 1.669 - 0.731 - - - - 0.938 - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
53. sall3b ENSDARG00000057586 982 1.668 0.748 0.920 - - - - - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
54. tnr ENSDARG00000020771 20 1.657 - 0.731 - - - 0.926 - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
55. amigo3 ENSDARG00000074469 39 1.645 - 0.896 - - - 0.749 - - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
56. ncana 1537 1.631 0.837 - - - - - 0.794 - - neurocan a
57. dnm1b ENSDARG00000009281 219 1.625 - - - - - 0.766 0.859 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
58. wdr19 ENSDARG00000037406 98 1.616 - 0.809 0.807 - - - - - - WD repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-090313-277]
59. CABZ01041604.1 ENSDARG00000059854 35 1.616 0.728 - - - - - 0.888 - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
60. si:ch211-149b19.4 ENSDARG00000095911 49 1.612 - 0.713 - - - 0.899 - - - si:ch211-149b19.4 [Source:ZFIN;Acc:ZDB-GENE-110411-90]
61. plekha7b ENSDARG00000062220, ENSDARG00000110462 11 1.61 0.728 - - - - - 0.882 - - pleckstrin homology domain containing, family A member 7b [Source:ZFIN;Acc:ZDB-GENE-091014-2]
62. helt ENSDARG00000056400 482 1.597 - 0.896 - 0.701 - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
63. adcyap1b ENSDARG00000027740 1539 1.589 - - - - - - 0.818 0.771 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
64. dok6 ENSDARG00000063032 88 1.578 - - - - - - 0.833 0.745 - docking protein 6 [Source:ZFIN;Acc:ZDB-GENE-070410-50]
65. BAI1_1 BAI1_1 57 1.569 - 0.704 - - - 0.865 - - -
66. zgc:194470 zgc:194470 210 1.569 - 0.824 - - - - 0.745 - -
67. srgap2b srgap2b 80 1.565 - - - - - 0.704 0.861 - -
68. pou3f2a ENSDARG00000070220 817 1.562 - - - - - - 0.759 0.803 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
69. SYT2 ENSDARG00000014169 265 1.56 - - - - - 0.760 0.800 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
70. lpar6b ENSDARG00000069441 65 1.547 0.728 0.819 - - - - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
71. cacng2a ENSDARG00000032565 99 1.546 0.716 - - - - 0.830 - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
72. RSF1_2 RSF1_2 1343 1.545 - - - - - 0.813 0.732 - -
73. dpysl5b ENSDARG00000059311 600 1.537 - 0.816 - - - - 0.721 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
74. tas1r3 ENSDARG00000006341 3 1.528 0.728 - - - - - 0.800 - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
75. bicc2 ENSDARG00000076557 77 1.522 0.818 0.704 - - - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
76. zgc:113162 ENSDARG00000052923 62 1.504 - 0.713 - - - - 0.791 - - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
77. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1.504 - - - - - 0.704 0.800 - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
78. nrxn2a ENSDARG00000061454 291 1.501 - - - - - - 0.753 - 0.748 neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
79. si:dkey-190g11.3 ENSDARG00000025914 49 1.501 0.788 - - - - - 0.713 - - si:dkey-190g11.3 [Source:ZFIN;Acc:ZDB-GENE-081104-341]
80. CTBP2 CTBP2 19 1.5 0.728 - - - - 0.772 - - -
81. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.488 - - - - - - 0.730 0.758 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
82. tarsl2 ENSDARG00000092774 505 1.48 - 0.700 - - - - 0.780 - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
83. foxb1a ENSDARG00000089042 101 1.476 - 0.704 - - - - 0.772 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
84. ccdc28b ENSDARG00000011222 528 1.475 - - - - - - 0.758 0.717 - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
85. atp1b4 ENSDARG00000053262 1337 1.473 0.709 0.764 - - - - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
86. PRIMA1 PRIMA1 459 1.47 0.764 - - - - - 0.706 - -
87. lrrtm1 ENSDARG00000052713 1041 1.459 - - - - - 0.758 0.701 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
88. fam49a ENSDARG00000006672 939 1.452 - 0.731 - - - 0.721 - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
89. si:ch211-14c7.2 ENSDARG00000094522 369 1.447 - - - - - 0.712 0.735 - - si:ch211-14c7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-856]
90. nkx2.2b ENSDARG00000101549 266 1.443 0.702 - - - - - 0.741 - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
91. nipbla ENSDARG00000098272 26 1.439 0.728 0.711 - - - - - - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
92. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.436 - - - - - - - 0.717 0.719 growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
93. scn1lab ENSDARG00000062744 155 1.433 - 0.731 - - - - - 0.702 - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
94. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.431 - - - - - 0.704 - 0.727 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
95. crygm2d10 ENSDARG00000087765 358 1 - 1.000 - - - - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
96. cdx1b ENSDARG00000116139 113 1 - 1.000 - - - - - - - caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
97. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - 1.000 - - - - - - -
98. CU694254.1 CU694254.1 4 1 - 1.000 - - - - - - -
99. BX511189.1 BX511189.1 34 1 - 1.000 - - - - - - -
100. si:dkey-57a22.13 ENSDARG00000092345, ENSDARG00000116169 2 1 - 1.000 - - - - - - - si:dkey-57a22.13 [Source:ZFIN;Acc:ZDB-GENE-081104-425]

There are 1248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA