Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chrng

Gene Name Gene ID Reads Annotation
chrng ENSDARG00000086647 676 cholinergic receptor, nicotinic, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-3805]










Genes with expression patterns similar to chrng

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrng ENSDARG00000086647 676 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-3805]
2. slc1a3a ENSDARG00000104431 9888 1.706 0.875 0.831 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
3. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 1.656 0.893 0.763 - - - - - - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
4. polr3gla ENSDARG00000012044 148 1.656 - 0.865 - - - 0.791 - - - polymerase (RNA) III (DNA directed) polypeptide G like a [Source:ZFIN;Acc:ZDB-GENE-040912-67]
5. her9 ENSDARG00000056438, ENSDARG00000115775 3099 1.655 0.837 0.818 - - - - - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
6. wu:fb17g07 wu:fb17g07 10567 1.644 0.826 0.818 - - - - - - -
7. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 1.637 0.809 0.828 - - - - - - - ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
8. chrnd ENSDARG00000019342 2728 1.622 0.720 0.902 - - - - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
9. prmt1 ENSDARG00000010246 11311 1.619 0.795 0.824 - - - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
10. rassf8b ENSDARG00000045485 1568 1.602 0.776 0.826 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
11. zcchc24 ENSDARG00000078026 1619 1.593 - 0.821 - 0.772 - - - - - zinc finger, CCHC domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-3573]
12. tmsb ENSDARG00000054911 6411 1.579 0.830 0.749 - - - - - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
13. CCRN4L CCRN4L 518 1.562 0.788 0.774 - - - - - - -
14. pebp1 ENSDARG00000042069 6651 1.561 0.861 0.700 - - - - - - - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
15. igdcc4 ENSDARG00000076919 1303 1.56 0.707 0.853 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
16. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 1.554 - 0.848 - - - - 0.706 - - acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
17. six1a ENSDARG00000039304 1183 1.552 - 0.839 - - - 0.713 - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
18. gypc ENSDARG00000041546 1487 1.55 - 0.823 - 0.727 - - - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
19. gpd1l ENSDARG00000040024 2182 1.546 0.701 0.845 - - - - - - - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
20. mhc1uma ENSDARG00000039164 16 1.543 - - - - - 0.795 0.748 - - major histocompatibility complex class I UMA [Source:ZFIN;Acc:ZDB-GENE-140820-1]
21. ACVR2B 6615 1.536 0.710 0.826 - - - - - - - activin A receptor, type IIB
22. dnmt3ab ENSDARG00000015566 1206 1.535 0.792 0.743 - - - - - - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
23. tnika ENSDARG00000056218 728 1.531 0.825 0.706 - - - - - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
24. six1b ENSDARG00000026473 1908 1.53 0.708 0.822 - - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
25. gpr146 ENSDARG00000059610 810 1.528 0.746 0.782 - - - - - - - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
26. zgc:77086 ENSDARG00000014015 4908 1.527 0.822 0.705 - - - - - - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
27. asb12b ENSDARG00000037558, ENSDARG00000113049, ENSDARG00000116721 378 1.519 - 0.740 - 0.779 - - - - - ankyrin repeat and SOCS box-containing 12b [Source:ZFIN;Acc:ZDB-GENE-040822-25]
28. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.518 0.747 0.771 - - - - - - -
29. tmem47 ENSDARG00000057322 4691 1.518 0.716 0.802 - - - - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
30. uckl1b ENSDARG00000078973 2237 1.509 0.803 0.706 - - - - - - - uridine-cytidine kinase 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-090311-45]
31. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 1.509 - 0.709 - - - 0.800 - - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
32. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 1.506 - 0.764 - - - 0.742 - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
33. ednrb1a ednrb1a 1255 1.505 0.751 0.754 - - - - - - -
34. si:ch73-21k16.6 si:ch73-21k16.6 4896 1.504 0.803 0.701 - - - - - - -
35. snrpe ENSDARG00000033175 7462 1.504 0.704 0.800 - - - - - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
36. cap2 ENSDARG00000104478 3266 1.499 0.748 0.751 - - - - - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
37. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1.498 - - - - - 0.787 0.711 - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
38. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.495 0.745 0.750 - - - - - - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
39. gtpbpl gtpbpl 337 1.494 - 0.745 - - - 0.749 - - -
40. eya4 ENSDARG00000012397, ENSDARG00000117039 887 1.491 0.721 0.770 - - - - - - - EYA transcriptional coactivator and phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-050327-93]
41. PPP1R9B PPP1R9B 855 1.489 0.729 0.760 - - - - - - -
42. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.487 0.727 0.760 - - - - - - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
43. tmem242 ENSDARG00000037070 1081 1.483 0.705 0.778 - - - - - - - transmembrane protein 242 [Source:ZFIN;Acc:ZDB-GENE-040724-146]
44. wnt4a ENSDARG00000071208 1157 1.479 0.773 0.706 - - - - - - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
45. pdcd11 ENSDARG00000052480 2791 1.476 0.748 0.728 - - - - - - - programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
46. dnajc15 ENSDARG00000038309 1274 1.475 0.764 0.711 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
47. camk2d2 ENSDARG00000014273 2840 1.475 0.756 0.719 - - - - - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
48. atp6v0a2a ENSDARG00000035538 278 1.473 0.757 0.716 - - - - - - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
49. epb41b ENSDARG00000029019 1472 1.471 - 0.713 - - - 0.758 - - - erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
50. ppp1r14c ENSDARG00000077341 1587 1.466 0.716 0.750 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
51. qdprb1 ENSDARG00000037378, ENSDARG00000115067, ENSDARG00000115308 338 1.441 0.731 0.710 - - - - - - - quinoid dihydropteridine reductase b1 [Source:ZFIN;Acc:ZDB-GENE-050522-320]
52. anp32e ENSDARG00000054804 11017 1.433 0.721 0.712 - - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
53. myoz2a ENSDARG00000012311 1373 1.412 0.702 0.710 - - - - - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
54. psmb5 ENSDARG00000075445, ENSDARG00000111880 126 1 - - - - - - 1.000 - - proteasome subunit beta 5 [Source:ZFIN;Acc:ZDB-GENE-990415-215]
55. si:ch73-7i4.2 ENSDARG00000093998 154 0.957 - - - - - - 0.957 - - si:ch73-7i4.2 [Source:ZFIN;Acc:ZDB-GENE-060810-137]
56. sptb ENSDARG00000030490 7128 0.951 - 0.951 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
57. myoz2b ENSDARG00000037266 2139 0.948 - 0.948 - - - - - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
58. ptrfa ptrfa 4363 0.935 - 0.935 - - - - - - -
59. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 0.935 - 0.935 - - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
60. ryr1a ENSDARG00000011422 2377 0.932 - 0.932 - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
61. DUSP27 ENSDARG00000099889 1197 0.931 - 0.931 - - - - - - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
62. mir133b_1 671 0.928 - 0.928 - - - - - - - microRNA 133b
63. alpk3a ENSDARG00000078989 1992 0.927 - 0.927 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
64. atpaf1 ENSDARG00000042799 1309 0.927 - 0.927 - - - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
65. jph1a ENSDARG00000058603 2852 0.926 - 0.926 - - - - - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
66. tnnc1b ENSDARG00000037539 13945 0.926 - 0.926 - - - - - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
67. nars ENSDARG00000061100 2948 0.924 - 0.924 - - - - - - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
68. BX511021.1 ENSDARG00000073936 647 0.923 - 0.923 - - - - - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
69. rrp9 ENSDARG00000041991, ENSDARG00000112140 1150 0.922 - 0.922 - - - - - - - ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060427-1]
70. CT027744.3 CT027744.3 5 0.922 - - - - - 0.922 - - -
71. CABZ01069519.1 CABZ01069519.1 64 0.921 - - - - - - 0.921 - -
72. chmp5a ENSDARG00000038855 129 0.918 - - - - - 0.918 - - - charged multivesicular body protein 5a [Source:ZFIN;Acc:ZDB-GENE-060503-60]
73. CCDC57_1 CCDC57_1 35 0.918 - - - - - 0.918 - - -
74. ntmt1 ENSDARG00000022399 5779 0.917 - 0.917 - - - - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
75. si:ch73-299h12.1 ENSDARG00000102321 233 0.917 - - - - - 0.917 - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
76. farsa ENSDARG00000098825 2813 0.915 - 0.915 - - - - - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
77. srl ENSDARG00000104587 11126 0.915 - 0.915 - - - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
78. PCDH11Y PCDH11Y 100 0.912 - - - - - - 0.912 - -
79. txlnbb ENSDARG00000076241 6396 0.911 - 0.911 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
80. slc43a1b ENSDARG00000037748 1406 0.911 - 0.911 - - - - - - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
81. ptprua ENSDARG00000092638 479 0.91 - 0.910 - - - - - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
82. rnf181 ENSDARG00000023958 270 0.91 - - - - - - 0.910 - - ring finger protein 181 [Source:ZFIN;Acc:ZDB-GENE-040426-1024]
83. si:ch211-114n24.7 si:ch211-114n24.7 2544 0.909 - 0.909 - - - - - - -
84. upf2 55 0.908 - - - - - - 0.908 - - UPF2 regulator of nonsense transcripts homolog (yeast)
85. ropn1l ENSDARG00000058370, ENSDARG00000114122 57 0.908 - - - - - - 0.908 - - rhophilin associated tail protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040724-235]
86. rp42-pen rp42-pen 3395 0.908 - 0.908 - - - - - - -
87. limch1a ENSDARG00000074275 2981 0.907 - 0.907 - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
88. pomp ENSDARG00000032296 4439 0.907 - 0.907 - - - - - - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
89. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 0.906 - 0.906 - - - - - - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
90. tgm1l1 ENSDARG00000102106 1437 0.902 - 0.902 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
91. eftud2 ENSDARG00000012261 3081 0.902 - 0.902 - - - - - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
92. fitm1 ENSDARG00000056464 1759 0.901 - 0.901 - - - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
93. hhatla ENSDARG00000039051 6598 0.898 - 0.898 - - - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
94. ryr1b ENSDARG00000023797 5693 0.897 - 0.897 - - - - - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
95. cacng1 cacng1 3118 0.897 - 0.897 - - - - - - -
96. PTPLA PTPLA 4044 0.896 - 0.896 - - - - - - -
97. C13H10orf71 3489 0.895 - 0.895 - - - - - - - chromosome 13 C10orf71 homolog
98. kcnt1 ENSDARG00000079484 45 0.895 - - - - - 0.895 - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
99. mrpl44 ENSDARG00000094277 1778 0.893 - 0.893 - - - - - - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
100. pbxip1a ENSDARG00000071015 4960 0.893 - 0.893 - - - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]

There are 1380 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA