Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chrne

Gene Name Gene ID Reads Annotation
chrne ENSDARG00000034307, ENSDARG00000112263 1022 cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]










Genes with expression patterns similar to chrne

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrne ENSDARG00000034307, ENSDARG00000112263 1022 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
2. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.917 0.742 0.790 - 0.723 - 0.851 0.811 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
3. tnnt3a ENSDARG00000030270 112506 3.668 - - 0.708 0.743 - 0.707 0.748 - 0.762 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
4. sh3bgr ENSDARG00000021633 3498 3.373 - 0.718 - - - 0.881 0.925 0.849 - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
5. myoz2a ENSDARG00000012311 1373 3.35 - - - 0.773 - 0.885 0.840 0.852 - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
6. txlnbb ENSDARG00000076241 6396 3.295 0.717 0.771 - - - 0.884 0.923 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
7. nexn ENSDARG00000057317 10972 3.237 - - - 0.742 - 0.819 0.865 - 0.811 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
8. rp42-pen rp42-pen 3395 3.224 - 0.764 - - - 0.854 0.866 - 0.740
9. gypc ENSDARG00000041546 1487 3.161 0.768 0.763 - - - 0.721 0.909 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
10. ryr3 ENSDARG00000071331 6795 3.135 0.702 0.819 - - - 0.787 0.827 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
11. chrna1 ENSDARG00000009021 2931 3.124 - 0.722 - 0.702 - 0.774 0.926 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
12. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.115 - - - 0.756 - 0.757 0.821 - 0.781 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
13. arpp21 ENSDARG00000061081 892 3.036 - 0.744 - 0.712 - - 0.725 0.855 - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
14. mybpc2b ENSDARG00000021265 9618 3.018 0.729 0.767 - - - - 0.817 - 0.705 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
15. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.006 - 0.740 - 0.748 - - 0.794 - 0.724 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
16. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.884 0.703 0.755 - 0.705 - - - - 0.721 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
17. mdh1b ENSDARG00000018008 3196 2.584 - - - - - 0.870 0.902 - 0.812 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
18. TRIM63 TRIM63 1600 2.505 - - - - - 0.818 0.888 0.799 -
19. ntmt1 ENSDARG00000022399 5779 2.501 - 0.793 - - - 0.818 0.890 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
20. PTPLA PTPLA 4044 2.479 - 0.759 - - - 0.812 0.908 - -
21. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 2.462 0.705 - - - - 0.875 0.882 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
22. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 2.461 - - - - - 0.843 0.849 0.769 - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
23. ablim2 ENSDARG00000055223 1934 2.449 - - - - - 0.865 0.804 0.780 - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
24. chrnd ENSDARG00000019342 2728 2.431 - 0.746 - - - - 0.901 0.784 - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
25. rtn2b ENSDARG00000057027 1391 2.428 - - - 0.794 - 0.722 0.912 - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
26. cacng1 cacng1 3118 2.42 0.717 - - - - 0.798 0.905 - -
27. zgc:92518 ENSDARG00000016343 3837 2.415 - - - 0.748 - 0.772 0.895 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
28. COL22A1 COL22A1 4473 2.415 0.754 0.781 - - - - 0.880 - -
29. klhl41b ENSDARG00000006757 10762 2.413 0.701 - - - - - 0.906 - 0.806 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
30. NRAP ENSDARG00000009341 3565 2.411 - 0.764 - - - 0.741 0.906 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
31. tnnc1b ENSDARG00000037539 13945 2.402 - 0.806 - - - 0.736 0.860 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
32. znf648 ENSDARG00000104823 1918 2.402 - 0.811 - - - 0.825 0.766 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
33. CU633479.5 ENSDARG00000114818 1815 2.398 - 0.736 - - - 0.816 0.846 - -
34. fxr1 ENSDARG00000022968 2831 2.395 0.769 - - - - 0.828 0.798 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
35. hhatla ENSDARG00000039051 6598 2.388 - 0.735 - - - - 0.912 0.741 - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
36. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 2.379 0.704 - - - - 0.790 0.885 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
37. myhc4 ENSDARG00000035438 1322 2.371 - 0.826 - 0.728 - - 0.817 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
38. fam212aa 1132 2.37 - 0.738 - - - 0.764 0.868 - - family with sequence similarity 212, member Aa, transcript variant X1
39. limch1a ENSDARG00000074275 2981 2.369 - 0.710 - - - 0.770 0.889 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
40. trdn ENSDARG00000041779 4283 2.368 - 0.763 - - - 0.768 0.837 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
41. aars ENSDARG00000069142, ENSDARG00000113882 10348 2.363 0.826 - - - - 0.711 0.826 - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
42. six1b ENSDARG00000026473 1908 2.357 0.710 - - - - 0.854 0.793 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
43. klhl40a ENSDARG00000039052 2537 2.357 - 0.702 - - - 0.761 0.894 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
44. hapln1a ENSDARG00000089769 12334 2.356 0.740 0.761 - - - - 0.855 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
45. ryr1b ENSDARG00000023797 5693 2.354 - 0.824 - - - - 0.819 - 0.711 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
46. atp5o 10343 2.353 - - - 0.721 - 0.800 0.832 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
47. sgcd ENSDARG00000098573 4980 2.336 0.761 - - - - - 0.866 - 0.709 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
48. tmem182 tmem182 12589 2.334 - - - 0.737 - 0.741 0.856 - -
49. srl ENSDARG00000104587 11126 2.331 - 0.776 - 0.715 - - 0.840 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
50. pygmb ENSDARG00000013317 5454 2.327 - 0.728 - - - - 0.787 0.812 - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
51. prx ENSDARG00000017246 6183 2.325 - 0.717 - - - - 0.863 - 0.745 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
52. fbp2 ENSDARG00000012366 1042 2.325 - 0.774 - - - 0.799 0.752 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
53. si:ch1073-184j22.2 ENSDARG00000078598 707 2.318 0.713 - - - - - 0.746 0.859 - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
54. stac3 ENSDARG00000098883 1765 2.309 - 0.743 - - - 0.753 0.813 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
55. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.306 0.751 0.752 - - - - 0.803 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
56. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.305 0.758 - - - - 0.842 0.705 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
57. smyd2b ENSDARG00000005629 8181 2.301 - 0.806 - - - 0.784 - - 0.711 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
58. mafa ENSDARG00000015890 2140 2.289 - - - - - 0.780 0.773 - 0.736 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
59. vwde ENSDARG00000103443 5758 2.287 - 0.761 - - - 0.732 0.794 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
60. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 2.286 - - 0.728 - - - 0.851 - 0.707 cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
61. CR847973.1 ENSDARG00000115516 8754 2.284 - 0.763 - - - 0.747 0.774 - -
62. txlnba ENSDARG00000020594 9385 2.282 - - - 0.709 - - 0.841 - 0.732 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
63. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.279 - - - - - 0.728 0.808 - 0.743 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
64. mybphb ENSDARG00000003081 5208 2.272 - 0.764 - - - - 0.806 - 0.702 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
65. BX530018.3 ENSDARG00000107022 614 2.27 - 0.761 - - - 0.783 0.726 - -
66. sptb ENSDARG00000030490 7128 2.269 - 0.701 - - - - 0.859 - 0.709 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
67. myoz2b ENSDARG00000037266 2139 2.268 - 0.732 - - - 0.744 0.792 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
68. SYNPO2 SYNPO2 7382 2.267 - - 0.702 - - 0.788 - - 0.777
69. atp1b3b ENSDARG00000042837 5163 2.266 0.710 - - - - 0.793 0.763 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
70. trim101 ENSDARG00000018264 827 2.263 - - - 0.761 - 0.706 0.796 - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
71. myod1 ENSDARG00000030110 6019 2.262 - 0.703 - - - 0.716 0.843 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
72. tgm1l1 ENSDARG00000102106 1437 2.26 - 0.797 0.709 - - - 0.754 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
73. tnnt2d ENSDARG00000002988 7590 2.257 - 0.727 - - - - 0.810 - 0.720 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
74. kcnma1a ENSDARG00000079840 2584 2.256 0.705 - - - - 0.800 0.751 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
75. PTP4A3 ENSDARG00000039997 3814 2.255 0.723 - - - - 0.773 0.759 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
76. si:ch211-242b18.1 ENSDARG00000054723 2929 2.252 - 0.727 - - - 0.812 0.713 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
77. cspg4 ENSDARG00000078227 1084 2.247 - - - - - 0.726 0.817 0.704 - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
78. prkcq ENSDARG00000034173 405 2.246 - 0.776 - - - - 0.728 0.742 - protein kinase C, theta [Source:ZFIN;Acc:ZDB-GENE-041210-195]
79. MYOT ENSDARG00000076312 1791 2.225 - 0.767 - - - 0.701 0.757 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
80. FHOD3_1 FHOD3_1 983 2.211 0.727 0.748 - - - - 0.736 - -
81. PPIP5K1 PPIP5K1 997 2.205 - 0.715 - - - 0.763 0.727 - -
82. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 2.201 0.711 - - - - 0.739 0.751 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
83. fgf6a ENSDARG00000009351 799 2.191 - 0.701 - - - - 0.719 0.771 - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
84. tpma ENSDARG00000033683 752432 2.158 - - 0.720 0.701 - - 0.737 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
85. ptrfa ptrfa 4363 2.157 - 0.716 - - - 0.735 - - 0.706
86. murca murca 6614 2.153 - - - - - 0.738 - 0.711 0.704
87. MUSTN1 MUSTN1 1882 1.759 - - - - - 0.871 0.888 - -
88. PTGES3L PTGES3L 4801 1.748 - - - - - 0.831 0.917 - -
89. zgc:158296 ENSDARG00000070923 3935 1.745 - - - - - 0.843 0.902 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
90. parvb ENSDARG00000019117 1042 1.73 - - - - - 0.806 0.924 - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
91. slc24a4a ENSDARG00000015425 1464 1.717 - - - - - 0.879 - 0.838 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-050417-291]
92. ppp1r14c ENSDARG00000077341 1587 1.716 - 0.861 - - - - 0.855 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
93. casq1b ENSDARG00000018105 2643 1.712 - - - - - - 0.900 0.812 - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
94. BX322787.1 ENSDARG00000105779 381 1.711 - 0.849 - - - - - 0.862 -
95. col11a2 ENSDARG00000012422 3204 1.68 - 0.917 - - - - - 0.763 - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
96. eef2k ENSDARG00000035835 2906 1.675 - - - 0.812 - - 0.863 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
97. ATP5J_2 ATP5J_2 2381 1.668 0.773 - - - - - 0.895 - -
98. si:ch211-156j16.1 ENSDARG00000092035 7441 1.665 - - - - - - 0.887 - 0.778 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
99. DNAJA4 ENSDARG00000051762 5657 1.663 - - - - - 0.766 0.897 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
100. asb2a asb2a 845 1.656 - - - - - 0.799 0.857 - -

There are 1321 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA