Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chrnd

Gene Name Gene ID Reads Annotation
chrnd ENSDARG00000019342 2728 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]










Genes with expression patterns similar to chrnd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrnd ENSDARG00000019342 2728 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
2. casq1b ENSDARG00000018105 2643 5.052 0.839 0.761 - - - 0.985 0.915 0.832 0.720 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
3. trim55a ENSDARG00000029596 2858 4.981 0.831 0.936 0.843 - - - 0.888 0.726 0.757 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
4. ryr1b ENSDARG00000023797 5693 4.226 - 0.931 0.728 - - 0.916 0.917 - 0.734 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
5. pbxip1a ENSDARG00000071015 4960 4.17 0.823 0.934 0.754 0.708 - - 0.951 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
6. PTPLA PTPLA 4044 4.149 0.809 0.925 0.765 - - - 0.925 - 0.725
7. txlnbb ENSDARG00000076241 6396 4.128 0.827 0.941 0.717 - - - 0.933 - 0.710 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
8. ITGB1BP2 ENSDARG00000030176 2472 4.02 0.834 0.882 0.719 - - - 0.828 - 0.757 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
9. MYOM1 MYOM1 3870 3.951 0.811 0.775 0.735 - - - 0.909 - 0.721
10. sh3bgr ENSDARG00000021633 3498 3.626 0.859 0.936 - - - - 0.962 0.869 - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
11. usp28 ENSDARG00000008880 1850 3.591 0.761 0.902 - - - 0.995 0.933 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
12. hhatla ENSDARG00000039051 6598 3.46 0.819 0.898 - - - - 0.938 0.805 - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
13. myoz2b ENSDARG00000037266 2139 3.445 0.776 0.866 - - 0.904 - 0.899 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
14. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.425 0.778 0.935 0.798 - - - 0.914 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
15. znf106a ENSDARG00000016651 6049 3.414 0.826 0.932 - - - - 0.897 - 0.759 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
16. klhl41b ENSDARG00000006757 10762 3.41 0.806 - 0.847 - - - 0.946 - 0.811 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
17. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.399 0.805 0.928 - - - - 0.916 - 0.750 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
18. pcmt ENSDARG00000015201 5132 3.373 - 0.791 - - - 0.971 0.879 - 0.732 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
19. BX324201.1 BX324201.1 3302 3.367 0.790 - - - - 0.959 0.879 - 0.739
20. vcl vcl 6667 3.341 0.844 0.913 0.797 - - - - - 0.787
21. srl ENSDARG00000104587 11126 3.341 0.783 0.929 0.712 - - - 0.917 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
22. zgc:158296 ENSDARG00000070923 3935 3.329 - 0.897 0.736 - - - 0.926 - 0.770 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
23. nexn ENSDARG00000057317 10972 3.323 0.827 - 0.806 - - - 0.929 - 0.761 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
24. chrna1 ENSDARG00000009021 2931 3.312 0.732 0.847 0.802 - - - 0.931 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
25. TRIM63 TRIM63 1600 3.31 0.764 0.877 - 0.738 - - 0.931 - -
26. myoz2a ENSDARG00000012311 1373 3.309 0.813 0.753 - - - - 0.931 0.812 - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
27. CU633479.5 ENSDARG00000114818 1815 3.286 0.752 0.827 - - - - 0.923 0.784 -
28. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.286 0.772 - 0.826 - - - 0.944 - 0.744 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
29. myod1 ENSDARG00000030110 6019 3.274 0.701 0.873 - - - - 0.922 - 0.778 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
30. TMPO TMPO 3264 3.27 0.744 0.885 0.733 - - - 0.908 - -
31. tnnt2d ENSDARG00000002988 7590 3.266 0.803 0.800 - - - - 0.905 - 0.758 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
32. klhl41a ENSDARG00000068888 1034 3.249 0.706 0.793 - - - 0.994 - 0.756 - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
33. smyd2b ENSDARG00000005629 8181 3.245 0.854 0.911 0.758 - - - - - 0.722 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
34. pygmb ENSDARG00000013317 5454 3.232 - 0.826 - - - - 0.873 0.831 0.702 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
35. cap2 ENSDARG00000104478 3266 3.227 0.837 0.771 - - - - 0.889 - 0.730 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
36. mef2ca ENSDARG00000029764 18547 3.219 0.744 0.806 0.793 - - 0.876 - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
37. si:ch211-156j16.1 ENSDARG00000092035 7441 3.213 0.773 - 0.764 - - - 0.923 - 0.753 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
38. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.186 0.795 0.768 - - - - 0.888 - 0.735 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
39. arpp21 ENSDARG00000061081 892 3.162 0.804 0.843 - - - - 0.708 0.807 - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
40. hspg2 ENSDARG00000076564 3440 3.161 0.727 0.849 - - - - 0.830 0.755 - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
41. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 3.147 0.776 0.913 0.722 - - - 0.736 - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
42. mdh2 ENSDARG00000043371 14485 3.127 0.777 - 0.700 - - - 0.913 - 0.737 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
43. tmem161a ENSDARG00000012790 16094 3.088 0.828 - 0.801 - - - 0.710 - 0.749 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
44. apobec2a ENSDARG00000018881 4790 3.071 0.806 0.836 - - 0.714 - - - 0.715 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
45. tomm34 ENSDARG00000001557 1874 3.048 0.755 0.779 - 0.716 - - 0.798 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
46. sucla2 ENSDARG00000005359 5992 3.047 0.711 0.817 - - 0.792 - - - 0.727 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
47. BX470254.1 ENSDARG00000097402 1389 3.042 0.711 0.764 - - 0.847 - 0.720 - -
48. fgf6a ENSDARG00000009351 799 2.994 - 0.765 - - - - 0.799 0.728 0.702 fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
49. pygma ENSDARG00000055518 15972 2.68 0.844 0.931 - - - - 0.905 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
50. hdac9b ENSDARG00000056642 1148 2.679 0.753 - - - - 0.992 0.934 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
51. tnnc1b ENSDARG00000037539 13945 2.677 - 0.926 0.824 - - - 0.927 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
52. sptb ENSDARG00000030490 7128 2.66 0.814 0.906 - - - - 0.940 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
53. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.645 0.826 0.931 - - - - 0.888 - -
54. serpinf1 ENSDARG00000069048 2083 2.638 - 0.797 - - - 0.986 0.855 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
55. C13H10orf71 3489 2.638 0.839 0.898 - - - - 0.901 - - chromosome 13 C10orf71 homolog
56. BX294434.1 ENSDARG00000061272 6493 2.633 0.832 0.856 - - - - 0.945 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
57. NRAP ENSDARG00000009341 3565 2.628 0.885 0.823 - - - - 0.920 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
58. ntmt1 ENSDARG00000022399 5779 2.626 0.783 0.906 - - - - 0.937 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
59. prx ENSDARG00000017246 6183 2.623 0.873 0.786 - - - - 0.964 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
60. obsl1b ENSDARG00000077388 2511 2.622 0.774 0.902 - - - - 0.946 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
61. cacng1 cacng1 3118 2.621 0.797 0.893 - - - - 0.931 - -
62. tnni2b.1 ENSDARG00000035958 51597 2.62 0.743 - 0.889 - - 0.988 - - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
63. trdn ENSDARG00000041779 4283 2.616 0.840 0.853 - - - - 0.923 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
64. stac3 ENSDARG00000098883 1765 2.608 0.818 0.891 - - - - 0.899 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
65. lamb2 ENSDARG00000002084 3265 2.602 0.717 0.898 - - - 0.987 - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
66. DNAJA4 ENSDARG00000051762 5657 2.6 - 0.898 0.748 - - - 0.954 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
67. limch1a ENSDARG00000074275 2981 2.592 - 0.863 - - 0.829 - 0.900 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
68. trim63 trim63 2437 2.59 0.847 - 0.826 - - - 0.917 - -
69. CU638714.1 ENSDARG00000100303 2132 2.589 0.804 0.850 - - - - 0.935 - -
70. klhl40a ENSDARG00000039052 2537 2.577 0.770 0.904 - - - - 0.903 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
71. asb5b ENSDARG00000053222 1207 2.562 0.821 0.900 - - - - 0.841 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
72. zgc:92113 1738 2.562 0.818 - - - - - 0.955 - 0.789 zgc:92113
73. ryr3 ENSDARG00000071331 6795 2.558 0.754 0.884 - - - - 0.920 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
74. ablim2 ENSDARG00000055223 1934 2.554 - - - - 0.828 - 0.893 0.833 - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
75. smyd1b ENSDARG00000091253 4964 2.55 0.875 0.866 - 0.809 - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
76. mdh1b ENSDARG00000018008 3196 2.547 0.819 - 0.799 - - - 0.929 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
77. MUSTN1 MUSTN1 1882 2.545 0.782 0.853 - - - - 0.910 - -
78. xirp2a ENSDARG00000071113 7113 2.54 0.804 0.855 - - - - 0.881 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
79. cmya5 ENSDARG00000061379 1423 2.536 0.829 0.776 - - - - 0.931 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
80. akap6 ENSDARG00000077295 1382 2.533 0.861 0.821 - - - - 0.851 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
81. txn2 ENSDARG00000034777 4071 2.529 - 0.747 - - - 0.987 0.795 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
82. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 2.519 0.855 - 0.713 - - - 0.951 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
83. fitm1 ENSDARG00000056464 1759 2.516 - 0.880 0.720 - - - 0.916 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
84. PHB2 PHB2 3755 2.508 0.782 0.897 - - - - 0.829 - -
85. rp42-pen rp42-pen 3395 2.506 - 0.901 - - - - 0.899 - 0.706
86. reep1 ENSDARG00000014854 915 2.504 - 0.776 - - 0.885 - 0.843 - - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
87. adss ENSDARG00000002071 5497 2.501 0.832 - - - - - 0.917 0.752 - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
88. smtnl1 ENSDARG00000041257 7410 2.497 0.848 - - - - - 0.946 - 0.703 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
89. pvalb4 ENSDARG00000024433 35736 2.494 0.874 - 0.715 - - - 0.905 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
90. CR847973.1 ENSDARG00000115516 8754 2.493 0.744 0.890 - - - - 0.859 - -
91. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 2.488 - 0.809 - - - - 0.843 0.836 - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
92. CR388002.1 CR388002.1 1998 2.487 0.816 0.898 - - - - 0.773 - -
93. actn3b ENSDARG00000001431 15747 2.483 0.832 0.905 0.746 - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
94. AIMP1 ENSDARG00000060036 4136 2.481 0.811 0.906 0.764 - - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
95. zgc:92518 ENSDARG00000016343 3837 2.476 0.834 - - - - - 0.931 - 0.711 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
96. srpk3 ENSDARG00000005916 1546 2.474 0.723 0.907 - - - - 0.844 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
97. FHOD3_1 FHOD3_1 983 2.474 0.784 0.874 - - - - 0.816 - -
98. zgc:153662 zgc:153662 4604 2.47 0.833 0.789 - - - - 0.848 - -
99. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 2.47 0.835 - - - - - 0.928 0.707 - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
100. mybpc2b ENSDARG00000021265 9618 2.462 0.714 0.857 - - - - 0.891 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]

There are 1978 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA