Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chrnb3a

Gene Name Gene ID Reads Annotation
chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]










Genes with expression patterns similar to chrnb3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
2. cers6 ENSDARG00000053583 247 3.362 0.816 0.831 - - - 0.857 0.858 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
3. Mar-09 Mar-09 126 3.314 0.760 0.900 - - 0.814 - 0.840 - -
4. atp2b3b ENSDARG00000023445 1424 3.302 0.800 0.759 - - - 0.840 0.903 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
5. upf3a ENSDARG00000069297, ENSDARG00000111067 196 3.253 0.709 0.831 - - - 0.831 0.882 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
6. lhx5 ENSDARG00000057936 785 3.242 0.804 - - - - 0.843 0.815 0.780 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
7. nmnat2 ENSDARG00000004580 370 3.223 0.865 0.847 - - - 0.764 0.747 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
8. EML6 250 2.715 0.846 - - - - 0.941 0.928 - - echinoderm microtubule associated protein like 6
9. tnika ENSDARG00000056218 728 2.708 0.923 - - - - 0.955 0.830 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
10. KCNIP4 ENSDARG00000088100 86 2.69 - 0.900 - - - 0.939 0.851 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
11. PPFIA3 ENSDARG00000077053 310 2.689 - 0.900 - - - 0.956 0.833 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
12. si:ch211-133l11.10 ENSDARG00000005626 381 2.656 - - - 0.980 - 0.952 0.724 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
13. syt9a ENSDARG00000003994 298 2.646 0.849 0.900 - - - 0.897 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
14. TRPC4_1 TRPC4_1 212 2.642 0.771 - - - - 0.932 0.939 - -
15. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 2.624 - 0.900 - - - 0.943 0.781 - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
16. GADD45G GADD45G 382 2.605 0.808 0.900 - - - - 0.897 - -
17. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.594 0.731 0.910 - - - 0.953 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
18. C7H4orf48 C7H4orf48 1455 2.578 0.843 - - - - 0.865 0.870 - -
19. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.567 - 0.900 - - - 0.898 0.769 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
20. nrcam nrcam 397 2.562 - 0.900 - - 0.800 0.862 - - -
21. pou4f1 ENSDARG00000005559 821 2.562 0.832 - - 0.937 - - 0.793 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
22. atpv0e2 ENSDARG00000059057 585 2.561 0.760 - - - - 0.962 0.839 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
23. nxph1 ENSDARG00000033447 182 2.558 0.855 - - - - 0.956 0.747 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
24. bsk146 ENSDARG00000099069 274 2.557 - 0.900 - - - 0.910 0.747 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
25. MCTP1 MCTP1 219 2.552 0.934 - - - - 0.703 0.915 - -
26. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.532 0.844 - - - - 0.824 0.864 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
27. CLIP3 ENSDARG00000054456 734 2.518 0.790 - - - - 0.963 0.765 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
28. syt11a ENSDARG00000057913 1145 2.516 0.766 - - - - 0.896 0.854 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
29. CABZ01065506.1 CABZ01065506.1 204 2.501 - 0.900 - - - 0.899 0.702 - -
30. syn1 ENSDARG00000060368, ENSDARG00000111164 397 2.499 0.907 - - - - 0.854 0.738 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
31. nrn1a ENSDARG00000071860 1311 2.493 0.828 - - - - 0.891 0.774 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
32. slc12a5b ENSDARG00000078187 329 2.493 - 0.900 - - 0.753 - 0.840 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
33. pcsk2 ENSDARG00000019451 442 2.483 0.794 - - 0.849 0.840 - - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
34. TUBB2A TUBB2A 142 2.468 0.732 - - - - 0.913 0.823 - -
35. plp1a ENSDARG00000103732 3544 2.461 0.749 - - - - 0.888 0.824 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
36. mdkb ENSDARG00000020708 5393 2.448 0.818 - - - - 0.887 0.743 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
37. pcsk1nl ENSDARG00000076170 1232 2.446 0.720 - - - - 0.870 0.856 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
38. stmn1b ENSDARG00000033655 9491 2.44 0.780 - - - - 0.915 0.745 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
39. lrrc4.2 ENSDARG00000003020 235 2.433 - 0.812 - - 0.855 0.766 - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
40. ADAM22 ENSDARG00000060532 2259 2.432 - - - - - 0.927 0.779 0.726 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
41. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.431 0.827 0.900 - - - 0.704 - - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
42. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 2.422 0.798 - - - - 0.845 0.779 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
43. SGSM1 SGSM1 254 2.421 0.799 0.900 - - - - 0.722 - -
44. lrrn3 lrrn3 137 2.415 0.851 - - - - 0.864 0.700 - -
45. aatkb ENSDARG00000104442 392 2.414 0.793 - - - - 0.811 0.810 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
46. SV2B SV2B 208 2.414 0.861 - - - - 0.829 0.724 - -
47. TUBB8P7_1 TUBB8P7_1 2722 2.409 0.820 - - - - 0.711 0.878 - -
48. mapk12b ENSDARG00000006409 2246 2.408 0.727 - - - - 0.948 0.733 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
49. cacna2d3 ENSDARG00000078760 211 2.407 - 0.756 - - - 0.933 0.718 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
50. pcdh1gc5 ENSDARG00000104826 10052 2.407 0.763 - - - - 0.811 0.833 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
51. sv2bb ENSDARG00000060711 196 2.407 0.933 - - - 0.728 - 0.746 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
52. nrxn3b ENSDARG00000062693 192 2.406 0.726 - - - - 0.707 0.973 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
53. cnrip1a ENSDARG00000091683 1491 2.405 - 0.710 - - - 0.963 0.732 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
54. prrt1 ENSDARG00000062208 368 2.403 0.867 - - - - 0.726 0.810 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
55. dtnbb ENSDARG00000013020 280 2.401 0.711 - - - - 0.926 0.764 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
56. zic4 ENSDARG00000031307 1228 2.39 0.771 - - - - 0.813 0.806 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
57. RASGRF2 RASGRF2 644 2.389 - - - 0.852 - 0.798 0.739 - -
58. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.386 - 0.760 - - - 0.834 0.792 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
59. CT030046.1 CT030046.1 190 2.385 0.744 - - - - 0.935 0.706 - -
60. LINGO2 LINGO2 300 2.382 0.708 - - - - 0.953 0.721 - -
61. isl1 ENSDARG00000004023 981 2.378 - - - 0.763 - 0.800 0.815 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
62. atp6v0a2a ENSDARG00000035538 278 2.378 0.765 - - - - 0.860 0.753 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
63. dpysl5a ENSDARG00000011141 1827 2.369 0.779 0.819 - - - 0.771 - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
64. cldn5a ENSDARG00000043716 3865 2.363 0.775 - - - - 0.790 0.798 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
65. gabra5 ENSDARG00000070730 156 2.363 0.896 - - - - 0.708 0.759 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
66. rab3ab ENSDARG00000043835 1267 2.354 0.824 - - - - 0.766 0.764 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
67. mir10d-1 mir10d-1 860 2.325 0.784 - - - - 0.808 0.733 - -
68. slc1a3a ENSDARG00000104431 9888 2.325 0.846 - - - - 0.770 0.709 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
69. CABZ01051991.1 CABZ01051991.1 346 2.322 0.729 - - - - 0.825 0.768 - -
70. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.32 0.752 - - - - 0.864 0.704 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
71. zic5 ENSDARG00000016022 1034 2.305 0.759 - - - - 0.845 0.701 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
72. gap43 ENSDARG00000099744 4114 2.3 0.829 - - - - 0.770 0.701 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
73. mllt11 ENSDARG00000071026 2518 2.294 0.771 - - - - 0.750 0.773 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
74. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.29 0.777 - - - - 0.795 0.718 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
75. adcyap1b ENSDARG00000027740 1539 2.289 0.827 - - - - - 0.720 0.742 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
76. gfap ENSDARG00000025301 5584 2.281 0.759 - - - - 0.772 0.750 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
77. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.28 0.765 - - - - 0.790 0.725 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
78. CCDC61 ENSDARG00000062307 582 2.268 0.724 - - 0.803 - 0.741 - - - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
79. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.259 0.751 - - - 0.740 0.768 - - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
80. snap25a ENSDARG00000020609 4537 2.257 0.798 - - - - 0.727 0.732 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
81. tuba1c ENSDARG00000055216 8384 2.255 0.772 - - - - 0.735 0.748 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
82. sox21b ENSDARG00000008540 1460 2.208 - 0.773 - - - - 0.726 0.709 - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
83. unc13c 197 2.143 0.705 - - - - 0.725 0.713 - - unc-13 homolog C (C. elegans)
84. kcnn1a ENSDARG00000091306 95 1.939 - - - - - 0.969 0.970 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
85. hs3st1l2 ENSDARG00000035578 279 1.915 - - - 0.925 - - 0.990 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
86. zic3 ENSDARG00000071497 1448 1.906 - - - - - 0.958 0.948 - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
87. lgi3 ENSDARG00000041358 46 1.895 - - - - - 0.919 0.976 - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
88. EIF4G3 EIF4G3 24 1.886 - 0.947 - - - - 0.939 - -
89. CR388231.1 ENSDARG00000098710 153 1.884 - - - - - 0.931 0.953 - -
90. cdk5r2a ENSDARG00000071011 167 1.88 0.945 - - - - - 0.935 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
91. kif3cb ENSDARG00000079500 935 1.878 - - - - - 0.939 0.939 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
92. KCNJ6 ENSDARG00000058985 71 1.876 - 0.900 - - - - 0.976 - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
93. si:dkey-100n10.2 101 1.869 - - - - - 0.958 0.911 - - si:dkey-100n10.2
94. gpr144 gpr144 479 1.861 - - - - - 0.934 0.927 - -
95. ksr2 ENSDARG00000094526 134 1.859 - - - - - 0.976 0.883 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
96. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.856 - 0.956 - - - 0.900 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
97. CABZ01038313.1 CABZ01038313.1 79 1.855 - 0.900 - - - 0.955 - - -
98. dnajc6 ENSDARG00000079891 438 1.854 - - - - - 0.929 0.925 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
99. cacnb4b ENSDARG00000062174 159 1.854 - 1.000 - - - 0.854 - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
100. HELZ2_1 ENSDARG00000012600 53 1.852 - - - 0.985 - 0.867 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]

There are 2860 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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