Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chrna6

Gene Name Gene ID Reads Annotation
chrna6 ENSDARG00000055559 60 cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]










Genes with expression patterns similar to chrna6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrna6 ENSDARG00000055559 60 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
2. PRR12 PRR12 38 2.821 - 1.000 - - - 0.883 0.938 - -
3. GADD45G_1 GADD45G_1 236 2.663 - 1.000 - - - 0.758 0.905 - -
4. CABZ01021538.1 CABZ01021538.1 67 2.612 0.832 1.000 - - - - 0.780 - -
5. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.408 - 0.880 - - - 0.811 0.717 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
6. slc35g2b ENSDARG00000045447 378 2.358 - 0.711 - - - 0.923 0.724 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
7. nhlh2 ENSDARG00000025495 1860 2.355 - 0.829 - - - 0.783 0.743 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
8. nlgn3a ENSDARG00000104786 91 2.32 - 0.740 - - - 0.709 0.871 - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
9. sprn ENSDARG00000056004 128 2.208 0.729 - - - - 0.712 0.767 - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
10. hsp70l_1 ENSDARG00000055723 72 2 1.000 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
11. kif20a ENSDARG00000044491 12 1.938 - 1.000 - - - - 0.938 - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
12. si:dkey-199m13.8 si:dkey-199m13.8 61 1.938 - 1.000 - - - - 0.938 - -
13. pcyox1 ENSDARG00000103052 20 1.938 - 1.000 - - - - 0.938 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
14. si:ch211-57m13.9 ENSDARG00000095884 10 1.938 - 1.000 - - - - 0.938 - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
15. sez6l ENSDARG00000100594 35 1.938 - 1.000 - - - - 0.938 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
16. prl ENSDARG00000037946 80 1.938 - 1.000 - - - - 0.938 - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
17. BX005294.2 ENSDARG00000109361 3 1.938 - 1.000 - - - - 0.938 - -
18. galr1 galr1 9 1.935 - 1.000 - - - - 0.935 - -
19. gad1b ENSDARG00000027419 440 1.927 - 1.000 - - - - 0.927 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
20. si:dkey-222f8.6 si:dkey-222f8.6 7 1.918 - - 0.980 - - - 0.938 - -
21. pdzd4 175 1.916 - 1.000 - - - 0.916 - - - PDZ domain containing 4, transcript variant X2
22. SMARCA4 ENSDARG00000104339 48 1.894 - 1.000 - - - 0.894 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
23. LMTK3 LMTK3 222 1.875 - 1.000 0.875 - - - - - -
24. gpr61 ENSDARG00000055570 128 1.855 - 1.000 - - - 0.855 - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
25. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.847 - 1.000 - - - 0.847 - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
26. si:dkey-100n10.2 101 1.836 - 1.000 - - - - 0.836 - - si:dkey-100n10.2
27. si:dkeyp-82h4.1 ENSDARG00000096463 18 1.825 0.825 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
28. bmp1b ENSDARG00000028053 25 1.825 0.825 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
29. si:ch211-188i4.4 5 1.825 0.825 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
30. traf1 ENSDARG00000069482 50 1.825 0.825 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
31. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.825 0.825 1.000 - - - - - - -
32. mcm5_1 ENSDARG00000019507 10 1.825 0.825 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
33. si:ch211-120c15.1 si:ch211-120c15.1 20 1.825 0.825 1.000 - - - - - - -
34. CABZ01073954.1 CABZ01073954.1 258 1.823 - 1.000 - - - 0.823 - - -
35. cdk20 ENSDARG00000003867 27 1.818 0.825 - 0.993 - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
36. KIF2A_1 ENSDARG00000043571 189 1.817 - 1.000 0.817 - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
37. BX936443.2 BX936443.2 28 1.813 - 0.875 - - - - 0.938 - -
38. zgc:113691 ENSDARG00000038898 36 1.812 0.825 - 0.987 - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
39. vcam1 vcam1 243 1.81 - 1.000 - - - - 0.810 - -
40. fam43b ENSDARG00000070222 92 1.808 - 1.000 - - - 0.808 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
41. st6gal1 ENSDARG00000044514 142 1.793 - 1.000 - - - - 0.793 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
42. ptf1a ENSDARG00000014479 349 1.793 - - - - - 0.855 0.938 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
43. zgc:100906 ENSDARG00000033599 344 1.787 - - - - - 0.909 0.878 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
44. CABZ01007222.1 CABZ01007222.1 78 1.779 - 1.000 - - - 0.779 - - -
45. slc25a29 ENSDARG00000057352 9 1.778 - 1.000 - - - - - - 0.778 solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
46. si:dkey-193c22.1 ENSDARG00000093687 104 1.775 - 1.000 - - - 0.775 - - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
47. ANO8 ANO8 380 1.77 - - - - - 0.839 0.931 - -
48. si:ch211-223a21.3 ENSDARG00000104737 28 1.763 0.825 - - - - - 0.938 - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
49. ccdc24 ENSDARG00000038793 7 1.761 - - - - - 0.823 0.938 - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
50. abcg4a ENSDARG00000061047 56 1.757 - - - - - 0.851 0.906 - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
51. BX247898.1 BX247898.1 75 1.753 - 0.875 - - - - 0.878 - -
52. si:ch211-26b3.4 ENSDARG00000075491 50 1.751 - - - - - 0.772 0.979 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
53. RNF208 ENSDARG00000078056 60 1.75 - - - - - 0.903 0.847 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
54. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.749 - - - - - 0.943 0.806 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
55. si:ch73-389b16.2 ENSDARG00000103802 340 1.74 - - - - - 0.825 0.915 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
56. BX469915.2 BX469915.2 48 1.738 0.825 - - - - - 0.913 - -
57. aatkb ENSDARG00000104442 392 1.738 - 1.000 - - - - 0.738 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
58. elavl4 ENSDARG00000045639 998 1.737 - 0.794 - - - 0.943 - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
59. sult4a1 ENSDARG00000101967 205 1.735 - - - - - 0.857 0.878 - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
60. zgc:194665 ENSDARG00000004577 136 1.733 - - - - - 0.932 0.801 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
61. zgc:158654 19 1.719 0.825 - - - - - 0.894 - - zgc:158654, transcript variant X1
62. rab3c ENSDARG00000014462, ENSDARG00000042803 508 1.715 - 0.883 - - - 0.832 - - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
63. RNaseP_nuc RNaseP_nuc 7 1.715 - 1.000 - - 0.715 - - - -
64. bhlhe22 ENSDARG00000058039 1673 1.714 - 0.954 - - - 0.760 - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
65. mb21d2a mb21d2a 421 1.713 - 0.835 - - - 0.878 - - -
66. SYT2 ENSDARG00000014169 265 1.707 - - - - - 0.920 0.787 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
67. ntn1b ENSDARG00000022531 248 1.695 0.726 - - - - - 0.969 - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
68. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1.689 - - - 0.751 - - 0.938 - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
69. MCTP1 MCTP1 219 1.688 - - - - - 0.773 0.915 - -
70. nptnb ENSDARG00000043864 165 1.686 - - - - - 0.795 0.891 - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
71. bicc2 ENSDARG00000076557 77 1.686 0.785 - 0.901 - - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
72. dync1i1 ENSDARG00000060948 554 1.684 - - - - - 0.866 0.818 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
73. sorcs3b ENSDARG00000077349 72 1.682 - - - - - 0.964 0.718 - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
74. lgi1a ENSDARG00000020493 1218 1.679 - - - - - 0.797 0.882 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
75. stx12l ENSDARG00000044605 99 1.674 - - 0.822 - - - 0.852 - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
76. shisa7 shisa7 181 1.668 - 0.756 - - - - 0.912 - -
77. pbx3a ENSDARG00000089262 97 1.668 - - - - - 0.725 0.943 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
78. fat3a ENSDARG00000033840 902 1.667 - 0.880 - - - - 0.787 - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
79. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.661 - - - - - 0.877 0.784 - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
80. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.659 - - - - - 0.721 0.938 - -
81. bgnb ENSDARG00000002945, ENSDARG00000110495 76 1.658 - - 0.886 - - 0.772 - - - biglycan b [Source:ZFIN;Acc:ZDB-GENE-040426-21]
82. MAP3K2 ENSDARG00000062884 34 1.657 - - - - - 0.719 0.938 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
83. glrba ENSDARG00000052782, ENSDARG00000117018 4 1.655 - 0.880 - - - - 0.775 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
84. ccdc6b ENSDARG00000017595 828 1.654 - - - - - 0.879 0.775 - - coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
85. CNTNAP3 ENSDARG00000067824 25 1.653 - - - - 0.715 - 0.938 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
86. slc12a5b ENSDARG00000078187 329 1.649 - - - - - 0.869 0.780 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
87. dab1a ENSDARG00000059939 46 1.645 - 0.734 - - - 0.911 - - - Dab, reelin signal transducer, homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060528-1]
88. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.644 - 0.826 - - - - 0.818 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
89. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.636 - - - - - 0.853 0.783 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
90. mnx2b ENSDARG00000030350 484 1.634 - - - - - 0.770 0.864 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
91. SLITRK4 ENSDARG00000079781 54 1.634 - - - - - 0.854 0.780 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
92. rheb ENSDARG00000090213 1432 1.633 - - - - - 0.878 0.755 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
93. mapk11 ENSDARG00000045836 846 1.632 - - - - - 0.884 0.748 - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
94. fbxo41 ENSDARG00000078908 95 1.631 - - - - - 0.895 0.736 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
95. si:ch73-91k6.8 si:ch73-91k6.8 37 1.627 - - - - - 0.838 0.789 - -
96. si:ch73-173m3.3 si:ch73-173m3.3 425 1.622 0.750 0.872 - - - - - - -
97. b3galnt2 ENSDARG00000046133 68 1.622 - 0.847 - - - - 0.775 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
98. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.617 - - - - - 0.791 0.826 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
99. plcxd3 ENSDARG00000054794 112 1.614 - - - - - 0.839 0.775 - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-10]
100. DLGAP2 DLGAP2 36 1.61 - - - - - 0.808 0.802 - -

There are 1588 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA