Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chrna5

Gene Name Gene ID Reads Annotation
chrna5 ENSDARG00000003420 137 cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]










Genes with expression patterns similar to chrna5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrna5 ENSDARG00000003420 137 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]
2. chrna2a ENSDARG00000006602 163 2.453 0.880 - 0.829 - - 0.744 - - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
3. hoxa5a ENSDARG00000102501 1667 2.37 0.768 - - - - 0.752 0.850 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
4. rheb ENSDARG00000090213 1432 2.338 0.757 - - - - 0.865 0.716 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
5. UBE2QL1 ENSDARG00000079276 3474 2.303 0.802 - - - - 0.735 0.766 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
6. reep2 ENSDARG00000031382, ENSDARG00000112622 563 2.294 0.789 - - - - 0.750 0.755 - - receptor accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-125]
7. pax6a ENSDARG00000103379 3061 2.255 0.808 - - - - 0.725 0.722 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
8. C21H5orf24 C21H5orf24 333 2.251 - - 0.797 - - 0.746 0.708 - -
9. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.205 0.748 - - - - 0.749 0.708 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
10. slc8a2b ENSDARG00000100592 598 2.18 0.731 - - - - 0.748 0.701 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
11. si:dkey-169l5.3 si:dkey-169l5.3 239 1.734 0.785 - - - - 0.949 - - -
12. kif5c ENSDARG00000076027 424 1.711 0.805 - - - - 0.906 - - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
13. her4.3 ENSDARG00000070770 613 1.709 0.842 - - - - 0.867 - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
14. SLC5A7 SLC5A7 453 1.7 0.756 - - - - 0.944 - - -
15. sox19b ENSDARG00000040266 532 1.699 0.860 - - - - 0.839 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
16. hmga1b ENSDARG00000070951 377 1.696 - - - - - 0.801 0.895 - - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
17. jph3 ENSDARG00000102204 175 1.681 0.914 - - - - 0.767 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
18. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.666 0.812 - - - - 0.854 - - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
19. msi1 ENSDARG00000010710 2634 1.666 0.815 - - - - 0.851 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
20. pbx3a ENSDARG00000089262 97 1.659 - - - - 0.732 0.927 - - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
21. PRRT2 ENSDARG00000103588 913 1.643 - - - - - 0.775 0.868 - - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
22. lhfpl4a ENSDARG00000111810 206 1.642 - - - - - 0.928 0.714 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
23. si:ch211-152f6.6 si:ch211-152f6.6 278 1.639 0.728 - - - - 0.911 - - -
24. sv2bb ENSDARG00000060711 196 1.634 0.750 - - - - 0.884 - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
25. hnrnpa3 ENSDARG00000059351 453 1.632 0.812 - - - - 0.820 - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
26. C8H1orf106 C8H1orf106 2690 1.619 0.755 - - - - 0.864 - - -
27. gfra1b ENSDARG00000102564 821 1.58 - - 0.769 - - 0.811 - - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
28. cntn1b ENSDARG00000045685 159 1.574 0.710 - - - - - 0.864 - - contactin 1b [Source:ZFIN;Acc:ZDB-GENE-041210-236]
29. hectd2 ENSDARG00000061194 559 1.573 0.716 - - - - 0.857 - - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
30. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.571 0.747 - - - - 0.824 - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
31. ppp3ca ENSDARG00000004988 615 1.571 0.709 - - - - - 0.862 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
32. bhlhe22 ENSDARG00000058039 1673 1.57 0.746 - - - - 0.824 - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
33. ntrk2a ENSDARG00000059897 185 1.565 0.846 - - - - - 0.719 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
34. igsf9ba ENSDARG00000033845 158 1.564 0.737 - - - - 0.827 - - - immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]
35. EFCC1 ENSDARG00000077826 1359 1.562 0.780 - - - - 0.782 - - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
36. STMN3 ENSDARG00000038465 1009 1.561 - - - - - 0.850 0.711 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
37. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.556 - - - - - 0.815 0.741 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
38. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 1.553 - - - - - 0.788 0.765 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
39. btbd3b ENSDARG00000087517 107 1.55 0.747 - - - - 0.803 - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
40. pou3f3a ENSDARG00000042032 2835 1.549 0.733 - - - - 0.816 - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
41. gpr173 ENSDARG00000042922 238 1.548 - - 0.839 - - 0.709 - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
42. LURAP1 ENSDARG00000044406, ENSDARG00000115301 938 1.546 0.729 - 0.817 - - - - - - leucine rich adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-35]
43. CABZ01022575.2 CABZ01022575.2 83 1.54 0.758 - - - - - 0.782 - -
44. nptnb ENSDARG00000043864 165 1.536 0.818 - - - - 0.718 - - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
45. meis2a ENSDARG00000098240 5 1.534 0.747 - - - 0.787 - - - - Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]
46. CABZ01090951.1 CABZ01090951.1 78 1.531 0.747 - - - - 0.784 - - -
47. cldn15lb ENSDARG00000100844 46 1.527 0.747 - - - 0.780 - - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
48. FP016176.1 FP016176.1 7030 1.524 0.709 - - - - 0.815 - - -
49. runx1t1 ENSDARG00000003680 633 1.522 - - - - - 0.762 0.760 - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
50. mir124-2 196 1.522 0.811 - - - - - 0.711 - - microRNA 124-2
51. si:ch211-231i17.5 si:ch211-231i17.5 154 1.52 0.747 - - - - 0.773 - - -
52. clstn3 ENSDARG00000073883 590 1.51 - - - - - 0.793 0.717 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
53. fstl5 ENSDARG00000040198 213 1.508 0.747 - - - - 0.761 - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
54. vim ENSDARG00000010008 3551 1.501 0.743 - - - - 0.758 - - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
55. vgf ENSDARG00000105529 247 1.5 0.774 - - - - 0.726 - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
56. EPB41L1 EPB41L1 1896 1.494 - - - - - 0.790 0.704 - -
57. nell2b ENSDARG00000062797 854 1.49 - - - - - 0.787 0.703 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
58. LMTK3 LMTK3 222 1.488 0.708 - - - - 0.780 - - -
59. GRIK3 ENSDARG00000077715 178 1.487 0.747 - - - - 0.740 - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
60. ckbb ENSDARG00000043257 3503 1.476 0.741 - - - - 0.735 - - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
61. GLRA3 ENSDARG00000011066 242 1.475 - - - - - 0.764 0.711 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
62. fam60al 2846 1.475 0.721 - - - - - 0.754 - - family with sequence similarity 60, member A, like
63. nadl1.1 1200 1.474 0.733 - - - - 0.741 - - - neural adhesion molecule L1.1, transcript variant X1
64. sypb ENSDARG00000002230 262 1.47 - - - - - 0.755 0.715 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
65. PBRM1 ENSDARG00000003877 225 1.47 0.758 - - - - - 0.712 - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
66. fyna ENSDARG00000011370 1679 1.467 0.721 - - - - 0.746 - - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
67. rtn1b ENSDARG00000021143 1682 1.465 0.754 - - - - - 0.711 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
68. nlgn4a 102 1.461 - - - - - 0.746 0.715 - - neuroligin 4a, transcript variant X1
69. CDH7 16 1.458 0.747 - - - - 0.711 - - - cadherin 7, type 2, transcript variant X1
70. FGFBP3 FGFBP3 993 1.457 - - - - - 0.748 0.709 - -
71. gng3 ENSDARG00000009553 2530 1.454 0.746 - - - - 0.708 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
72. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 1.449 0.731 - - - - 0.718 - - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
73. pax6b ENSDARG00000045936 349 1.441 0.729 - - - - 0.712 - - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
74. TUBB8P7_2 TUBB8P7_2 565 1.439 0.739 - - - - 0.700 - - -
75. sall1a ENSDARG00000074319, ENSDARG00000111696 1486 1.439 - - - - - 0.708 0.731 - - spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]
76. pax7b ENSDARG00000070818 282 1.438 0.723 - 0.715 - - - - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
77. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.437 0.722 - - - - - 0.715 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
78. calm1a ENSDARG00000021811 4791 1.436 - - - - - 0.726 0.710 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
79. dbx2 2971 1.435 0.729 - - - - - 0.706 - - developing brain homeobox 2
80. prdm12b ENSDARG00000007430 914 1.434 - - - - - 0.716 0.718 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
81. dbx1a ENSDARG00000086393 3161 1.432 - - - - - 0.731 0.701 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
82. mlh1 ENSDARG00000025948 130 1.429 - - - - - 0.716 0.713 - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
83. camkvb ENSDARG00000005141, ENSDARG00000117013 262 0.982 - - - - - - 0.982 - - CaM kinase-like vesicle-associated b [Source:ZFIN;Acc:ZDB-GENE-040426-1140]
84. cpne5a ENSDARG00000061466, ENSDARG00000111461 105 0.958 0.958 - - - - - - - - copine Va [Source:ZFIN;Acc:ZDB-GENE-081105-9]
85. CABZ01029738.1 CABZ01029738.1 327 0.954 - - - - - 0.954 - - -
86. ft1 ENSDARG00000059056 102 0.944 - - 0.944 - - - - - - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
87. CABZ01078314.1 CABZ01078314.1 44 0.942 - - 0.942 - - - - - -
88. si:ch211-262i10.2 12 0.941 - - 0.941 - - - - - - si:ch211-262i10.2
89. zbtb25 ENSDARG00000042383 94 0.941 - - 0.941 - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
90. apnl ENSDARG00000090900 21 0.941 - - 0.941 - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
91. si:dkey-122c11.1 ENSDARG00000093747 19 0.941 - - 0.941 - - - - - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
92. cacnb4a ENSDARG00000009738 28 0.939 - - 0.939 - - - - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
93. pou2f2b pou2f2b 134 0.938 - - - - - 0.938 - - -
94. oxr1b ENSDARG00000063310 929 0.937 - - - - - 0.937 - - - oxidation resistance 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2438]
95. si:ch211-243a22.1 si:ch211-243a22.1 42 0.937 - - 0.937 - - - - - -
96. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.937 - - 0.937 - - - - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
97. cntn3a.1 ENSDARG00000062880 156 0.937 - - - - - - 0.937 - - contactin 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081030-10]
98. si:dkeyp-84g1.3 si:dkeyp-84g1.3 25 0.937 - - 0.937 - - - - - -
99. F2RL3 ENSDARG00000079399 29 0.936 - - 0.936 - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
100. si:ch211-214p16.2 ENSDARG00000094975 59 0.931 - - 0.931 - - - - - - si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]

There are 1080 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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