Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chrna1

Gene Name Gene ID Reads Annotation
chrna1 ENSDARG00000009021 2931 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]










Genes with expression patterns similar to chrna1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrna1 ENSDARG00000009021 2931 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
2. trim55a ENSDARG00000029596 2858 6.312 0.869 0.844 0.721 0.782 - 0.721 0.928 0.715 0.732 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
3. txlnbb ENSDARG00000076241 6396 5.777 0.869 0.924 0.727 - - 0.809 0.951 0.742 0.755 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
4. nexn ENSDARG00000057317 10972 5.077 0.904 - 0.725 0.762 - 0.933 0.942 - 0.811 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
5. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 4.961 0.851 0.910 0.744 0.726 - 0.811 0.919 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
6. PTPLA PTPLA 4044 4.397 0.861 0.879 - 0.755 - 0.938 0.964 - -
7. myod1 ENSDARG00000030110 6019 4.302 0.895 0.840 - - - 0.911 0.936 - 0.720 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
8. klhl40a ENSDARG00000039052 2537 4.28 0.888 0.865 - - - 0.846 0.953 - 0.728 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
9. ITGB1BP2 ENSDARG00000030176 2472 4.225 0.878 0.888 - - - 0.865 0.882 - 0.712 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
10. tnnc1b ENSDARG00000037539 13945 4.207 - 0.897 0.766 - - 0.825 0.914 - 0.805 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
11. sh3bgr ENSDARG00000021633 3498 4.198 0.836 0.860 - - - 0.844 0.956 0.702 - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
12. srl ENSDARG00000104587 11126 4.175 0.866 0.892 0.729 - - - 0.931 0.757 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
13. klhl41b ENSDARG00000006757 10762 4.172 0.854 - 0.749 - - 0.870 0.958 - 0.741 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
14. CR847973.1 ENSDARG00000115516 8754 4.171 0.837 0.842 - - - 0.882 0.907 0.703 -
15. cmya5 ENSDARG00000061379 1423 4.161 0.771 0.835 - - - 0.786 0.917 0.852 - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
16. ntmt1 ENSDARG00000022399 5779 4.161 0.797 0.962 - - - 0.765 0.913 - 0.724 N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
17. NRAP ENSDARG00000009341 3565 4.155 0.824 0.834 - 0.723 - 0.825 0.949 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
18. prx ENSDARG00000017246 6183 4.147 0.792 0.864 - 0.805 - - 0.953 - 0.733 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
19. sptb ENSDARG00000030490 7128 4.133 0.787 0.897 - - - 0.783 0.929 - 0.737 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
20. mdh1b ENSDARG00000018008 3196 4.104 0.751 0.779 0.840 - - 0.779 0.955 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
21. xirp2a ENSDARG00000071113 7113 4.087 0.862 0.855 - - - 0.712 0.893 - 0.765 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
22. cap2 ENSDARG00000104478 3266 4.082 0.839 0.868 - - - 0.766 0.884 - 0.725 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
23. limch1a ENSDARG00000074275 2981 4.08 0.857 0.848 - - - 0.718 0.951 - 0.706 LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
24. TENC1 TENC1 1729 4.072 0.821 0.885 - - - 0.761 0.879 - 0.726
25. ATP5J_2 ATP5J_2 2381 4.069 0.775 0.746 - - - 0.846 0.923 - 0.779
26. pbxip1a ENSDARG00000071015 4960 4.069 0.822 0.901 0.702 0.710 - - 0.934 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
27. sucla2 ENSDARG00000005359 5992 4.001 0.839 0.861 0.715 - - 0.851 - - 0.735 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
28. jph2 ENSDARG00000028625 6706 3.952 0.803 - - 0.722 - 0.735 0.958 0.734 - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
29. myoz2b ENSDARG00000037266 2139 3.927 0.765 0.766 - - - 0.794 0.892 - 0.710 myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
30. casq1b ENSDARG00000018105 2643 3.887 0.712 0.811 - - - - 0.922 0.738 0.704 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
31. tnnt3a ENSDARG00000030270 112506 3.835 0.866 - - 0.748 - 0.720 0.783 - 0.718 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
32. tmem161a ENSDARG00000012790 16094 3.826 0.864 - 0.766 0.717 - - 0.717 - 0.762 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
33. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 3.773 - - - - 0.719 0.760 0.852 0.732 0.710 cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
34. rp42-pen rp42-pen 3395 3.519 - 0.957 - 0.799 - 0.860 0.903 - -
35. fitm1 ENSDARG00000056464 1759 3.513 0.880 0.905 - 0.776 - - 0.952 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
36. gypc ENSDARG00000041546 1487 3.51 0.825 0.904 - - - 0.865 0.916 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
37. murca murca 6614 3.508 0.909 - - - - 0.907 - 0.865 0.827
38. TRIM63 TRIM63 1600 3.486 0.783 0.829 - - - 0.902 0.972 - -
39. smtnl1 ENSDARG00000041257 7410 3.482 0.854 - - - - 0.880 0.953 - 0.795 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
40. PTGES3L PTGES3L 4801 3.467 0.878 - - - - 0.881 0.938 - 0.770
41. cacng1 cacng1 3118 3.465 0.811 0.912 - - - 0.832 0.910 - -
42. MYOT ENSDARG00000076312 1791 3.458 0.883 0.896 - - - 0.756 0.923 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
43. mybpc2b ENSDARG00000021265 9618 3.445 0.898 0.912 - - - - 0.886 0.749 - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
44. trdn ENSDARG00000041779 4283 3.441 0.863 0.875 - - - 0.757 0.946 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
45. zgc:92518 ENSDARG00000016343 3837 3.429 0.853 - - - - 0.873 0.963 - 0.740 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
46. FHOD3_1 FHOD3_1 983 3.417 0.874 0.903 - - - 0.768 0.872 - -
47. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.413 0.839 0.729 - - - 0.919 0.926 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
48. vwde ENSDARG00000103443 5758 3.384 0.837 0.862 - - - 0.816 0.869 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
49. ryr3 ENSDARG00000071331 6795 3.381 0.727 0.910 - - - 0.790 0.954 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
50. TMPO TMPO 3264 3.381 0.859 0.865 0.713 - - - 0.944 - -
51. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.377 0.892 - - - - 0.817 0.915 - 0.753 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
52. tnnt2d ENSDARG00000002988 7590 3.377 0.827 0.820 - - - 0.821 0.909 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
53. hhatla ENSDARG00000039051 6598 3.371 0.812 0.888 - - - - 0.951 0.720 - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
54. stac3 ENSDARG00000098883 1765 3.37 0.853 0.787 - - - 0.846 0.884 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
55. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 3.333 0.832 0.837 - - - 0.840 0.824 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
56. trim63 trim63 2437 3.329 0.753 - 0.762 - - 0.887 0.927 - -
57. apobec2a ENSDARG00000018881 4790 3.319 0.872 0.871 - 0.711 - - - - 0.865 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
58. mafa ENSDARG00000015890 2140 3.317 0.803 - - - - 0.841 0.884 - 0.789 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
59. AIMP1 ENSDARG00000060036 4136 3.313 0.867 0.854 - - - 0.867 - - 0.725 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
60. chrnd ENSDARG00000019342 2728 3.312 0.732 0.847 0.802 - - - 0.931 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
61. CU633479.5 ENSDARG00000114818 1815 3.309 0.777 0.893 - - - 0.722 0.917 - -
62. hfe2 4113 3.298 0.880 0.930 - - - 0.768 - - 0.720 hemochromatosis type 2
63. vcl vcl 6667 3.287 0.856 0.900 0.767 - - - - - 0.764
64. SYNPO2L SYNPO2L 6697 3.283 0.832 - - 0.745 - 0.930 - - 0.776
65. si:ch211-156j16.1 ENSDARG00000092035 7441 3.268 0.884 - 0.711 - - - 0.927 - 0.746 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
66. znf648 ENSDARG00000104823 1918 3.259 0.750 0.871 - - - 0.856 0.782 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
67. MYOM3 2720 3.257 0.800 0.848 - - - 0.764 0.845 - - myomesin 3, transcript variant X2
68. myhc4 ENSDARG00000035438 1322 3.255 0.765 0.872 - - - 0.713 0.905 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
69. kcnma1a ENSDARG00000079840 2584 3.25 0.832 0.795 - - - 0.768 0.855 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
70. asb5b ENSDARG00000053222 1207 3.249 0.785 0.842 - - - - 0.856 - 0.766 ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
71. myoz2a ENSDARG00000012311 1373 3.247 0.734 0.879 - - - 0.723 0.911 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
72. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 3.236 0.868 0.746 - - - 0.736 0.886 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
73. si:ch211-242b18.1 ENSDARG00000054723 2929 3.23 0.768 0.863 - - - 0.795 0.804 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
74. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 3.212 0.760 0.792 - - - 0.733 0.927 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
75. six1b ENSDARG00000026473 1908 3.211 0.701 0.857 - - - 0.759 0.894 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
76. enah ENSDARG00000032049 1526 3.207 0.778 0.841 - - - 0.717 0.871 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
77. chchd3 chchd3 4139 3.198 0.753 0.723 - - - 0.834 0.888 - -
78. tgm1l1 ENSDARG00000102106 1437 3.194 0.718 0.918 - - - 0.754 0.804 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
79. PTP4A3 ENSDARG00000039997 3814 3.187 0.786 0.805 - - - 0.795 0.801 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
80. pygmb ENSDARG00000013317 5454 3.186 - 0.796 - - - - 0.923 0.741 0.726 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
81. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 3.185 0.756 0.827 - - 0.708 - 0.894 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
82. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.18 0.719 - 0.780 - - - 0.958 - 0.723 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
83. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 3.164 0.836 0.808 - - - 0.783 0.737 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
84. sms ENSDARG00000008155 1192 3.163 0.839 0.802 - - - 0.715 0.807 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
85. tmem38a ENSDARG00000024047 41883 3.161 0.861 - 0.823 0.776 - - - 0.701 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
86. myf6 ENSDARG00000029830 1911 3.158 0.742 0.754 - - - - 0.888 - 0.774 myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
87. eif4e2 ENSDARG00000038585 2116 3.149 0.858 - - 0.729 - 0.738 0.824 - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
88. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 3.138 0.758 0.748 - - - 0.745 0.887 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
89. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 3.128 0.745 0.846 0.738 - - - 0.799 - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
90. chrne ENSDARG00000034307, ENSDARG00000112263 1022 3.124 - 0.722 - 0.702 - 0.774 0.926 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
91. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 3.122 - 0.768 - 0.738 - 0.840 - - 0.776 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
92. bves ENSDARG00000058548 2291 3.12 0.838 - 0.790 - - 0.785 - - 0.707 blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
93. rtn2b ENSDARG00000057027 1391 3.108 0.729 0.713 - 0.709 - - 0.957 - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
94. DUSP27 ENSDARG00000099889 1197 3.1 0.818 0.738 - - - 0.730 0.814 - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
95. acta1b ENSDARG00000055618 195597 3.095 0.859 - 0.734 - - 0.777 0.725 - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
96. smarcd3a ENSDARG00000038786 2894 3.081 0.711 0.892 - - - 0.730 0.748 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
97. sdhdb ENSDARG00000030139 9761 3.07 0.826 - - - - 0.820 0.719 - 0.705 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
98. hsd17b10 ENSDARG00000017781 1793 3.027 0.706 0.802 - - - 0.760 0.759 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
99. ckmb ENSDARG00000040565 505935 3 0.778 - 0.704 0.793 - 0.725 - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
100. BX294434.1 ENSDARG00000061272 6493 2.73 0.837 0.936 - - - - 0.957 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]

There are 1768 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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