Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chrm3a

Gene Name Gene ID Reads Annotation
chrm3a ENSDARG00000071091 72 cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]










Genes with expression patterns similar to chrm3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrm3a ENSDARG00000071091 72 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
2. zgc:162331 ENSDARG00000069607 13 2.413 - - - - 0.962 0.730 0.721 - - zgc:162331 [Source:ZFIN;Acc:ZDB-GENE-070410-75]
3. LMTK3 LMTK3 222 2.385 - - - - 0.845 0.765 0.775 - -
4. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.875 - - - - - 0.929 0.946 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
5. CABZ01029738.1 CABZ01029738.1 327 1.856 - - - - - 0.965 0.891 - -
6. BX511121.1 ENSDARG00000029997 1774 1.839 - - - - - 0.929 0.910 - -
7. im:7162084 im:7162084 665 1.838 - - - - - 0.963 0.875 - -
8. si:dkey-169l5.3 si:dkey-169l5.3 239 1.832 - - - - - 0.946 0.886 - -
9. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.827 - - - - - 0.951 0.876 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
10. GJD2_1 GJD2_1 3045 1.819 - - - - - 0.863 0.956 - -
11. hectd2 ENSDARG00000061194 559 1.815 - - - - - 0.876 0.939 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
12. nkx6.2 ENSDARG00000104735 5081 1.807 - - - - - 0.899 0.908 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
13. neurog1 ENSDARG00000056130 3924 1.802 - - - - - 0.875 0.927 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
14. neurod neurod 1189 1.8 - - - - - 0.934 0.866 - -
15. chat chat 463 1.793 - - - - - 0.858 0.935 - -
16. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.782 - - - - - 0.873 0.909 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
17. TTBK1 TTBK1 120 1.781 - - - - 0.841 0.940 - - -
18. lhfpl4a ENSDARG00000111810 206 1.781 - - - - - 0.940 0.841 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
19. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.778 - - - - - 0.849 0.929 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
20. si:ch73-265d7.2 ENSDARG00000116713 2142 1.776 - - - - - 0.822 0.954 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
21. lrrtm1 ENSDARG00000052713 1041 1.775 - - - - - 0.840 0.935 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
22. ADAMTS3 ENSDARG00000060127 2839 1.771 - - - - - 0.875 0.896 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
23. dlg4 88 1.77 - - - - - 0.819 0.951 - - discs large MAGUK scaffold protein 4, transcript variant X5
24. FRRS1L ENSDARG00000103940 224 1.769 - - - - - 0.939 0.830 - - ferric-chelate reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-120827-1]
25. SLC5A7 SLC5A7 453 1.76 - - - - - 0.935 0.825 - -
26. AGO1 ENSDARG00000092644 4521 1.758 - - - - - 0.816 0.942 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
27. hnrnpa3 ENSDARG00000059351 453 1.757 - - - - - 0.842 0.915 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
28. SSX2IP SSX2IP 316 1.756 - - - - - 0.853 0.903 - -
29. CABZ01080599.2 CABZ01080599.2 192 1.756 - - - - - 0.935 0.821 - -
30. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.755 - - - - - 0.787 0.968 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
31. rheb ENSDARG00000090213 1432 1.749 - - - - - 0.796 0.953 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
32. nes ENSDARG00000088805 2710 1.747 - - - - - 0.831 0.916 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
33. DNER ENSDARG00000061031 123 1.746 - - - - - 0.905 0.841 - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
34. nkx6.1 ENSDARG00000022569 3779 1.746 - - - - - 0.836 0.910 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
35. mnx2b ENSDARG00000030350 484 1.746 - - - - - 0.857 0.889 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
36. C8H1orf106 C8H1orf106 2690 1.744 - - - - - 0.808 0.936 - -
37. pcdh2ac ENSDARG00000099783 325 1.738 - - - - - 0.828 0.910 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
38. mnx2a ENSDARG00000042106 939 1.735 - - - - - 0.878 0.857 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
39. pou3f2a ENSDARG00000070220 817 1.732 - - - - - 0.800 0.932 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
40. tmie ENSDARG00000069423 305 1.73 - - - - - 0.771 0.959 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
41. cdh7 582 1.73 - - - - - 0.898 0.832 - - cadherin 7, type 2, transcript variant X1
42. gpr98 gpr98 717 1.728 - - - - - 0.846 0.882 - -
43. lhx4 ENSDARG00000039458 328 1.728 - - - - - 0.851 0.877 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
44. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.727 - - - - - 0.823 0.904 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
45. ptprna ENSDARG00000058646 1327 1.727 - - - - - 0.747 0.980 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
46. si:ch211-247j9.1 ENSDARG00000079283 217 1.721 - - - - - 0.868 0.853 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
47. chga ENSDARG00000008829 1086 1.719 - - - - - 0.914 0.805 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
48. CU856207.1 CU856207.1 87 1.716 - - 0.865 - 0.851 - - - -
49. tmem136a ENSDARG00000024920 535 1.712 - - - - - 0.893 0.819 - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
50. sox19b ENSDARG00000040266 532 1.705 - - - - - 0.807 0.898 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
51. si:ch211-10a23.2 ENSDARG00000060656 471 1.704 - - - - - 0.879 0.825 - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
52. cdk5r2a ENSDARG00000071011 167 1.702 - - - - - 0.983 0.719 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
53. slc18a3a ENSDARG00000006356 1285 1.702 - - - - - 0.800 0.902 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
54. pkd1b ENSDARG00000033029 461 1.698 - - - - - 0.796 0.902 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
55. STMN3 ENSDARG00000038465 1009 1.698 - - - - - 0.823 0.875 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
56. lin7b ENSDARG00000037932 150 1.696 - - - - - 0.898 0.798 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
57. snap25b ENSDARG00000058117 469 1.695 - - - - 0.761 - 0.934 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
58. tmem35 ENSDARG00000052567 5685 1.69 - - - - - 0.834 0.856 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
59. ctnnd2b ENSDARG00000003779 964 1.689 - - - - - 0.758 0.931 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
60. elavl3 ENSDARG00000014420 8644 1.687 - - - - - 0.801 0.886 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
61. her4.3 ENSDARG00000070770 613 1.685 - - - - - 0.832 0.853 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
62. nova2 ENSDARG00000017673 7685 1.684 - - - - - 0.750 0.934 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
63. FP016176.1 FP016176.1 7030 1.684 - - - - - 0.830 0.854 - -
64. nptnb ENSDARG00000043864 165 1.683 - - - - - 0.775 0.908 - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
65. CDK5R1 CDK5R1 562 1.683 - - - - - 0.739 0.944 - -
66. zgc:113531 ENSDARG00000038794 2063 1.683 - - - - - 0.815 0.868 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
67. fyna ENSDARG00000011370 1679 1.681 - - - - - 0.803 0.878 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
68. atcaya ENSDARG00000071678 344 1.681 - - - - 0.900 - 0.781 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
69. ENTHD1 ENTHD1 235 1.679 - - - - - 0.859 0.820 - -
70. mir219-1 101 1.674 - - - - - 0.825 0.849 - - microRNA 219-1
71. prdm8 ENSDARG00000025017 370 1.67 - - - - - 0.892 0.778 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
72. GADD45G GADD45G 382 1.67 - - - - - 0.897 0.773 - -
73. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.667 - - - - - 0.784 0.883 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
74. CU928222.1 ENSDARG00000097436 1662 1.665 - - - - - 0.777 0.888 - -
75. apba1b ENSDARG00000074328 254 1.663 - - - - - 0.813 0.850 - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
76. gria2b ENSDARG00000052765 188 1.663 - - - - - 0.707 0.956 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
77. chrna2b ENSDARG00000057025 217 1.661 - - - - - 0.862 0.799 - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
78. foxn4 ENSDARG00000010591 2332 1.66 - - - - - 0.778 0.882 - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
79. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.657 - - - - - 0.772 0.885 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
80. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.657 - - - - - 0.779 0.878 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
81. calca ENSDARG00000056590 150 1.656 - - - - - 0.758 0.898 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
82. her2 ENSDARG00000038205 3219 1.656 - - - - - 0.759 0.897 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
83. fam43b ENSDARG00000070222 92 1.653 - - - - - 0.804 0.849 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
84. sema3c ENSDARG00000034300 881 1.651 - - - - - 0.845 0.806 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
85. si:ch211-26b3.4 ENSDARG00000075491 50 1.645 - - - - - 0.943 0.702 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
86. CHL1 CHL1 1553 1.645 - - - - - 0.724 0.921 - -
87. CABZ01028287.1 CABZ01028287.1 626 1.645 - - - - - 0.879 0.766 - -
88. vim ENSDARG00000010008 3551 1.644 - - - - - 0.725 0.919 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
89. nkx2.2b ENSDARG00000101549 266 1.643 - - - - - 0.791 0.852 - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
90. si:ch211-137i24.12 ENSDARG00000094537 35 1.643 - - - - 0.934 - 0.709 - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
91. pbx3a ENSDARG00000089262 97 1.643 - - - - - 0.793 0.850 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
92. pcdh19 ENSDARG00000034344 2378 1.64 - - - - - 0.804 0.836 - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
93. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.637 - - - - - 0.737 0.900 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
94. skib ENSDARG00000008034 6518 1.634 - - - - - 0.790 0.844 - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
95. zgc:100906 ENSDARG00000033599 344 1.627 - - - - - 0.716 0.911 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
96. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.625 - - - - - 0.701 0.924 - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
97. faxcb ENSDARG00000078981 249 1.623 - - - - - 0.778 0.845 - - failed axon connections homolog b [Source:ZFIN;Acc:ZDB-GENE-100922-19]
98. msi1 ENSDARG00000010710 2634 1.621 - - - - - 0.790 0.831 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
99. nhlh2 ENSDARG00000025495 1860 1.62 - - - - - 0.705 0.915 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
100. pkd2l1 ENSDARG00000022503 372 1.616 - - - - - 0.815 0.801 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]

There are 1164 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA