Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chrac1

Gene Name Gene ID Reads Annotation
chrac1 ENSDARG00000042337 2590 chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]










Genes with expression patterns similar to chrac1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chrac1 ENSDARG00000042337 2590 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
2. psmd4b ENSDARG00000023279 2002 2.517 - - - - - - 0.906 0.809 0.802 proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
3. luc7l3 ENSDARG00000014366 4416 2.426 - - 0.704 - 0.981 - 0.741 - - LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
4. zgc:153924 507 2.352 - 0.804 - - - - 0.736 0.812 - zgc:153924
5. ptpn23a ENSDARG00000070124 1206 2.351 - - - 0.764 - - 0.787 0.800 - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
6. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 2.346 - - - - - 0.726 0.907 - 0.713 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
7. dcaf12 ENSDARG00000063155 697 2.307 - - - 0.718 - - 0.789 0.800 - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
8. CECR2 ENSDARG00000078310 903 2.305 - - - 0.749 - - 0.794 - 0.762 cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
9. znf395b ENSDARG00000024195 342 2.159 - - - 0.707 - 0.738 0.714 - - zinc finger protein 395b [Source:ZFIN;Acc:ZDB-GENE-041001-193]
10. ndc1 ENSDARG00000021120 2417 1.829 - - - - 0.955 - 0.874 - - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
11. magt1 ENSDARG00000058062 3903 1.814 - - - - 0.972 - 0.842 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
12. lppr3a lppr3a 1294 1.784 - - - 0.793 0.991 - - - -
13. ttc14 ENSDARG00000013845 1192 1.767 - - - 0.777 0.990 - - - - tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
14. smg8 ENSDARG00000061378 1164 1.758 - - - - - - 0.867 0.891 - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
15. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 1.733 - - - 0.749 0.984 - - - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
16. fmnl2b ENSDARG00000075041 1744 1.732 - - - 0.764 0.968 - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
17. CCDC106 CCDC106 1908 1.724 - - - - 0.991 - 0.733 - -
18. nkx6.1 ENSDARG00000022569 3779 1.718 - - - 0.740 0.978 - - - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
19. cbx4 ENSDARG00000099441 372 1.716 - - - 0.847 - - 0.869 - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
20. BX927351.1 ENSDARG00000096844 125 1.715 - - - - - - 0.847 0.868 -
21. sdad1 ENSDARG00000105117 2819 1.713 - - - 0.724 0.989 - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
22. acvr1b acvr1b 2963 1.711 - 0.724 - - 0.987 - - - -
23. aclya ENSDARG00000099079 2324 1.708 - 0.721 - - 0.987 - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
24. pdcd6ip ENSDARG00000025269 2522 1.707 - - - - 0.986 - 0.721 - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
25. zfand1 ENSDARG00000009178, ENSDARG00000114617 1192 1.702 - - - 0.713 0.989 - - - - zinc finger, AN1-type domain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-269]
26. tefb ENSDARG00000098103 370 1.692 - - - - - - 0.844 0.848 - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
27. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.681 - - - - 0.949 - 0.732 - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
28. u2af2a ENSDARG00000012505 2920 1.678 - - - 0.792 - - 0.886 - - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
29. pgrmc2 ENSDARG00000030237, ENSDARG00000110406 791 1.677 - - - 0.813 - - - 0.864 - progesterone receptor membrane component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2102]
30. ppm1aa ENSDARG00000032155 1039 1.676 - - - - - - 0.825 0.851 - protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [Source:ZFIN;Acc:ZDB-GENE-991102-15]
31. CU928070.1 CU928070.1 1152 1.666 - - - - - - 0.834 0.832 -
32. zgc:111974 zgc:111974 1386 1.652 - - - - - 0.792 0.860 - -
33. gars ENSDARG00000059070 17015 1.65 - - - 0.759 0.891 - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
34. CABZ01049802.1 CABZ01049802.1 195 1.649 - - - - - - 0.782 0.867 -
35. EMILIN2 EMILIN2 429 1.646 - - - - - - 0.832 0.814 -
36. ppig ENSDARG00000044431 3427 1.643 - - - 0.829 - - 0.814 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
37. hoxa13a ENSDARG00000100312 543 1.635 - - - - - - 0.847 0.788 - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
38. atad5a ENSDARG00000070568 1840 1.633 - - - - - - 0.894 - 0.739 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
39. smu1 smu1 982 1.622 - - - - - - 0.790 0.832 -
40. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.618 - - - 0.763 0.855 - - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
41. slc44a1b ENSDARG00000090982 240 1.618 - - - - - - 0.736 0.882 - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
42. FAM83G ENSDARG00000062929 1142 1.617 - 0.726 - - - - - 0.891 - family with sequence similarity 83 member G [Source:HGNC Symbol;Acc:HGNC:32554]
43. dlgap1b ENSDARG00000037415 658 1.615 - - - - - 0.744 0.871 - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
44. ptgs2a ENSDARG00000004539 1207 1.612 - - - - - - 0.842 0.770 - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
45. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.611 - - - - - - 0.890 - 0.721 progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
46. dnajc5ab ENSDARG00000004836 2923 1.609 - - - 0.753 - - 0.856 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
47. tmeff1b ENSDARG00000056740 11253 1.608 - - - 0.796 0.812 - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
48. kmt2bb ENSDARG00000060697 5230 1.603 - - - 0.765 - 0.838 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
49. fgf8a ENSDARG00000003399 580 1.601 - - - - - - 0.800 0.801 - fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
50. ATXN7 ENSDARG00000074804 1137 1.601 - - - - 0.888 - 0.713 - - ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
51. glmna ENSDARG00000058267 597 1.599 - - - - - - 0.774 0.825 - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
52. prrc2a ENSDARG00000031494 2217 1.594 - - - 0.756 - - - - 0.838 proline-rich coiled-coil 2A [Source:ZFIN;Acc:ZDB-GENE-010501-4]
53. bbs4 ENSDARG00000063522 247 1.593 - - - 0.826 - - 0.767 - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
54. prpf8 ENSDARG00000026180 7026 1.591 0.773 - - 0.818 - - - - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
55. CU570791.5 CU570791.5 872 1.589 - - - 0.801 - - 0.788 - -
56. ruvbl1 ENSDARG00000002591 2381 1.588 - - - - - - 0.856 0.732 - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
57. rbb4l ENSDARG00000015208 5542 1.587 - - - - - 0.790 0.797 - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
58. sar1b ENSDARG00000103403 1699 1.585 - - - - - - 0.802 0.783 - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
59. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.583 - - - 0.875 - - - - 0.708 nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
60. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.583 - - - - - - 0.830 0.753 - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
61. acsbg2 ENSDARG00000004094 2445 1.581 - - - 0.716 - - - 0.865 - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
62. plcg1 ENSDARG00000038442 5324 1.58 - - - - 0.859 0.721 - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
63. ZNF70_2 ZNF70_2 1866 1.578 - - - - 0.864 - 0.714 - -
64. prkcbp1l ENSDARG00000011932 2714 1.572 - - - 0.825 - - 0.747 - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
65. aspg ENSDARG00000052942 1406 1.571 - - - - - 0.734 - 0.837 - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
66. TSSC4 ENSDARG00000036144 1994 1.566 - - - - - 0.825 0.741 - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
67. irf2a ENSDARG00000007387 915 1.558 - - - 0.743 - - 0.815 - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
68. zgc:174935 ENSDARG00000079255 532 1.557 - - - - - - 0.771 0.786 - zgc:174935 [Source:ZFIN;Acc:ZDB-GENE-080204-78]
69. vangl2 ENSDARG00000027397 2418 1.539 - - - - - - 0.820 - 0.719 VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
70. dram2b ENSDARG00000044241 503 1.538 - - - - - - 0.809 0.729 - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
71. tnrc6b ENSDARG00000074161 4597 1.537 - - - - - - 0.814 0.723 - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
72. trub2 ENSDARG00000028379 783 1.534 - - - 0.830 - - 0.704 - - TruB pseudouridine (psi) synthase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040704-41]
73. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.533 - - - - - - 0.814 - 0.719 Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
74. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 1.53 - - - 0.741 - - 0.789 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
75. hif1an ENSDARG00000031915 2098 1.522 - - - 0.783 - - - - 0.739 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
76. ercc3 ENSDARG00000002402 340 1.519 - - - 0.796 - - - - 0.723 excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
77. LIMD2 ENSDARG00000078092 3414 1.519 - - - - - - 0.801 0.718 - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
78. wu:fb30e12 wu:fb30e12 1254 1.518 - - - 0.779 - - - - 0.739
79. gemin2 ENSDARG00000015638 886 1.517 - - - - - - 0.764 - 0.753 gem (nuclear organelle) associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3756]
80. C15H11orf57 C15H11orf57 860 1.516 - - - 0.748 - - 0.768 - -
81. ndfip2 ENSDARG00000033928 3129 1.514 - - - - - 0.714 0.800 - - Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
82. sf3b5 ENSDARG00000016855 4015 1.513 - - - 0.731 - 0.782 - - - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
83. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.51 - - - - - - 0.741 0.769 - RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
84. aurka ENSDARG00000012485 3304 1.51 - - - 0.805 - 0.705 - - - aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
85. cwc25 ENSDARG00000003382 2134 1.503 - - - 0.784 - - 0.719 - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
86. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.503 - - - 0.717 - - - 0.786 - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
87. pnkd ENSDARG00000071032 447 1.502 - - - 0.720 - - 0.782 - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
88. sephs1 ENSDARG00000058292 3347 1.499 - - - 0.722 - - - - 0.777 selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
89. srrt ENSDARG00000017762, ENSDARG00000114824 2158 1.498 - - - - - - 0.770 0.728 - serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
90. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.498 - - - 0.771 - - 0.727 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
91. morc2 ENSDARG00000028539 3259 1.493 - - - - - 0.703 0.790 - - MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
92. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 1.476 - - - 0.726 - - - 0.750 - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
93. USO1 ENSDARG00000019581 1617 1.474 - - - - - - 0.721 0.753 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
94. papss2b ENSDARG00000056600 2872 1.472 - 0.764 - - - - - 0.708 - 3'-phosphoadenosine 5'-phosphosulfate synthase 2b [Source:ZFIN;Acc:ZDB-GENE-010323-5]
95. ufc1 ENSDARG00000022340 2618 1.47 - 0.757 - - - - 0.713 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
96. ITCH ITCH 1226 1.46 - - - 0.741 - - 0.719 - -
97. papola ENSDARG00000009585 9567 1.46 - - 0.716 - - - 0.744 - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
98. helz ENSDARG00000030560 3259 1.457 - - - 0.701 - - 0.756 - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
99. hmgcl ENSDARG00000021220 2468 1.455 0.723 - - - - 0.732 - - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
100. gps1 ENSDARG00000040650 3893 1.454 - - - - - 0.735 0.719 - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]

There are 1903 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA