Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chpf2

Gene Name Gene ID Reads Annotation
chpf2 ENSDARG00000059961 679 chondroitin polymerizing factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7797]










Genes with expression patterns similar to chpf2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chpf2 ENSDARG00000059961 679 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chondroitin polymerizing factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7797]
2. paip2b ENSDARG00000008706 4255 2.367 0.940 0.708 - - - - 0.719 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
3. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.767 0.955 - - 0.812 - - - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
4. BICD2 ENSDARG00000075571 401 1.759 0.962 - - 0.797 - - - - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
5. MRPL52 ENSDARG00000090568 4402 1.736 0.916 0.820 - - - - - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
6. map3k7 ENSDARG00000020469 2845 1.711 0.931 - - 0.780 - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
7. PLEKHM3 ENSDARG00000030633 496 1.707 0.944 - - 0.763 - - - - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
8. pdk1 ENSDARG00000013128 526 1.687 0.921 - - 0.766 - - - - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
9. MAP3K6 MAP3K6 181 1.687 0.959 - - - - - - - 0.728
10. ptpn21 ENSDARG00000062248 2010 1.673 0.953 0.720 - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
11. C11H19orf25 C11H19orf25 491 1.667 0.939 - - - - - - 0.728 -
12. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.664 0.964 - - - - 0.700 - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
13. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.66 0.933 0.727 - - - - - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
14. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.658 0.947 - - - - 0.711 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
15. gmfb ENSDARG00000028327 6522 1.657 0.926 0.731 - - - - - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
16. leo1 ENSDARG00000055357 1644 1.651 0.855 0.796 - - - - - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
17. phf14 ENSDARG00000061458 492 1.651 0.938 - - - - - - - 0.713 PHD finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-1796]
18. CASKIN2_1 CASKIN2_1 2299 1.65 0.852 - - 0.798 - - - - -
19. TSSC4 ENSDARG00000036144 1994 1.645 0.844 - - - - 0.801 - - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
20. chmp1a ENSDARG00000102643 1078 1.617 0.765 - - 0.852 - - - - - charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]
21. CAPN15 ENSDARG00000060600 248 1.612 - - - 0.848 - 0.764 - - - calpain 15 [Source:ZFIN;Acc:ZDB-GENE-140106-70]
22. ret ENSDARG00000055305 700 1.606 0.841 - - - - 0.765 - - - ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]
23. eva1ba ENSDARG00000102701 1480 1.599 0.897 - - - - - 0.702 - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
24. mob3a ENSDARG00000019113 2551 1.595 0.861 - - - - - 0.734 - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
25. RBM6 ENSDARG00000077060 3521 1.588 0.816 - - - - 0.772 - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
26. pi4kaa ENSDARG00000076724 1949 1.584 0.857 - - - - - 0.727 - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
27. mycbp ENSDARG00000091001 1511 1.574 0.871 0.703 - - - - - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
28. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 1.567 0.815 - - - - 0.752 - - - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
29. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.566 - 0.767 - - - 0.799 - - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
30. rars ENSDARG00000054530 1495 1.56 - 0.781 - - - - - - 0.779 arginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9014]
31. phrf1 ENSDARG00000075252 1982 1.555 0.809 0.746 - - - - - - - PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
32. mta3 ENSDARG00000054903, ENSDARG00000113436 353 1.54 - - - - - 0.765 - - 0.775 metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
33. kmt2bb ENSDARG00000060697 5230 1.535 - 0.755 - - - 0.780 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
34. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.532 0.818 0.714 - - - - - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
35. polr2k ENSDARG00000075616 2047 1.524 0.737 0.787 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
36. ralbp1 ENSDARG00000078653 2440 1.52 - 0.728 - - - 0.792 - - - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
37. yme1l1a ENSDARG00000075192 2634 1.514 - 0.794 - - - 0.720 - - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
38. axin2 ENSDARG00000100149 4223 1.512 0.753 0.759 - - - - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
39. POR POR 973 1.501 0.794 - - - - - - - 0.707
40. ift57 ENSDARG00000021022 288 1.499 - - - - - 0.708 - - 0.791 intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
41. med13b ENSDARG00000003910 1143 1.498 - 0.726 - - - 0.772 - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
42. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.484 - 0.718 - - - 0.766 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
43. LSM5 ENSDARG00000071573 371 1.482 - - - 0.728 - 0.754 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
44. pl10 pl10 10795 1.481 - 0.736 - - - 0.745 - - -
45. tmem57b 871 1.481 - - - - - 0.733 - - 0.748 transmembrane protein 57b, transcript variant X2
46. tmem176l.1 ENSDARG00000099491 860 1.478 - 0.754 - 0.724 - - - - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
47. rnd3a ENSDARG00000076799 4705 1.477 - - - 0.728 - 0.749 - - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
48. gse1 ENSDARG00000062020 2337 1.475 - 0.713 - - - 0.762 - - - Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
49. rbm22 ENSDARG00000010238 523 1.464 - - - 0.755 - 0.709 - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
50. nrip1b ENSDARG00000068894 2699 1.463 0.757 - - 0.706 - - - - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
51. CABZ01072954.1 CABZ01072954.1 2330 1.463 - 0.738 - - - 0.725 - - -
52. h2afy2_1 ENSDARG00000087897 9887 1.448 0.722 - - - - 0.726 - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
53. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.44 - 0.713 - - - 0.727 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
54. FP102272.1 FP102272.1 9473 0.979 0.979 - - - - - - - -
55. siae ENSDARG00000040527, ENSDARG00000111850 186 0.978 0.978 - - - - - - - - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
56. zgc:110626 ENSDARG00000053159 1124 0.974 0.974 - - - - - - - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
57. pdrg1 ENSDARG00000045017 628 0.973 0.973 - - - - - - - - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
58. CARKD 1398 0.973 0.973 - - - - - - - - carbohydrate kinase domain containing, transcript variant X7
59. swt1 ENSDARG00000094010 472 0.973 0.973 - - - - - - - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
60. aup1 ENSDARG00000092609 2431 0.969 0.969 - - - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
61. kif1b ENSDARG00000037020 2124 0.969 0.969 - - - - - - - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]
62. chmp3 ENSDARG00000038064 577 0.969 0.969 - - - - - - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
63. si:ch211-264e16.1 ENSDARG00000068947 1358 0.967 0.967 - - - - - - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
64. trim25l ENSDARG00000020863 292 0.967 0.967 - - - - - - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
65. si:ch211-157l15.4 si:ch211-157l15.4 92 0.966 0.966 - - - - - - - -
66. si:dkeyp-99c4.4 si:dkeyp-99c4.4 31 0.966 0.966 - - - - - - - -
67. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.966 0.966 - - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
68. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.966 0.966 - - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
69. PTPDC1 PTPDC1 30 0.966 0.966 - - - - - - - -
70. arhgap19 ENSDARG00000083189 210 0.965 0.965 - - - - - - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
71. AL929022.2 AL929022.2 567 0.965 0.965 - - - - - - - -
72. ACOT12 ENSDARG00000054534 61 0.965 0.965 - - - - - - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
73. pycr1 pycr1 1258 0.965 0.965 - - - - - - - -
74. map2k1 ENSDARG00000007825 373 0.965 0.965 - - - - - - - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
75. C2H7orf25 C2H7orf25 209 0.965 0.965 - - - - - - - -
76. fam155a ENSDARG00000075858 91 0.965 0.965 - - - - - - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
77. si:ch211-270n8.3 87 0.965 0.965 - - - - - - - - si:ch211-270n8.3, transcript variant X2
78. znf296 ENSDARG00000077897 658 0.964 0.964 - - - - - - - - zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
79. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 0.964 0.964 - - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
80. ing5a ENSDARG00000022413 268 0.964 0.964 - - - - - - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
81. gdap1l1 ENSDARG00000028628 233 0.964 0.964 - - - - - - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
82. ugt5b4 ENSDARG00000091916 130 0.964 0.964 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
83. cmtm6 ENSDARG00000099631 641 0.964 0.964 - - - - - - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
84. clic1 ENSDARG00000103340 2235 0.964 0.964 - - - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
85. bub1 ENSDARG00000077029 634 0.963 0.963 - - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-081104-75]
86. ALPK1 195 0.963 0.963 - - - - - - - - alpha-kinase 1
87. usp49 ENSDARG00000000229 706 0.962 0.962 - - - - - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
88. si:ch211-254c8.2 233 0.962 0.962 - - - - - - - - si:ch211-254c8.2, transcript variant X4
89. actr5 ENSDARG00000098235 237 0.962 0.962 - - - - - - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
90. wdr35 ENSDARG00000069269 492 0.962 0.962 - - - - - - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
91. sema3d ENSDARG00000017369 212 0.962 0.962 - - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
92. rhogb ENSDARG00000004301 358 0.962 0.962 - - - - - - - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
93. fam129ba ENSDARG00000062970 1578 0.962 0.962 - - - - - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
94. miox ENSDARG00000002764 588 0.961 0.961 - - - - - - - - myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
95. dnajc27 ENSDARG00000070916 530 0.961 0.961 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 27 [Source:ZFIN;Acc:ZDB-GENE-081022-93]
96. si:ch1073-322p19.1 ENSDARG00000075173 204 0.961 0.961 - - - - - - - - si:ch1073-322p19.1 [Source:ZFIN;Acc:ZDB-GENE-091204-224]
97. vps11 ENSDARG00000036338 421 0.96 0.960 - - - - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
98. zgc:92313 ENSDARG00000040513 790 0.96 0.960 - - - - - - - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
99. prickle1a ENSDARG00000040649 700 0.96 0.960 - - - - - - - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
100. arglu1b ENSDARG00000018319 1110 0.96 0.960 - - - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]

There are 1114 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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