Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chmp5b

Gene Name Gene ID Reads Annotation
chmp5b ENSDARG00000103718 1608 charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]










Genes with expression patterns similar to chmp5b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chmp5b ENSDARG00000103718 1608 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
2. rac2 ENSDARG00000038010 5837 3.149 - 0.728 - - - 0.871 0.800 - 0.750 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
3. magt1 ENSDARG00000058062 3903 2.562 - 0.856 - - - 0.828 - 0.878 - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
4. tfg ENSDARG00000003641, ENSDARG00000115188 3834 2.489 - 0.785 - - - - 0.829 - 0.875 trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
5. sec61al2 sec61al2 4551 2.352 - - - - - 0.750 0.808 - 0.794
6. GPR31 431 2.342 - - - - 0.714 0.894 0.734 - - G protein-coupled receptor 31
7. yif1a ENSDARG00000019636 2215 2.313 - - - - - 0.844 - 0.708 0.761 Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
8. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 2.222 - - - - 0.724 0.767 0.731 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
9. HOOK3 ENSDARG00000114329 1980 1.789 - - - - - 0.915 - - 0.874 hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
10. dbnla ENSDARG00000008170 2129 1.77 - - - - - 0.891 - - 0.879 drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
11. lsr ENSDARG00000099291 881 1.74 - - - - - - 0.925 - 0.815 lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
12. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 1.733 - - - - - 0.910 - - 0.823 RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
13. cldnf ENSDARG00000043133 1006 1.71 - - - - - 0.881 - - 0.829 claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
14. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 1.694 - - - - - 0.858 - 0.836 - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
15. CABZ01005777.1 CABZ01005777.1 505 1.689 - - - - - 0.837 - 0.852 -
16. myeov2 3351 1.688 - 0.897 - - - 0.791 - - - myeloma overexpressed 2
17. pef1 ENSDARG00000023989 3013 1.688 - - - - - 0.856 0.832 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
18. arcn1b ENSDARG00000031214 4529 1.684 - - - - - 0.852 0.832 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
19. si:ch211-286b5.5 ENSDARG00000096661 3136 1.681 - - - - - - 0.859 - 0.822 si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
20. mesdc2 776 1.673 - - - - - 0.819 - 0.854 - mesoderm development candidate 2, transcript variant X2
21. FUZ ENSDARG00000079730 821 1.672 - - - - - 0.880 - - 0.792 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
22. SH3D21 ENSDARG00000099448 1726 1.668 - - - - - 0.893 - - 0.775 SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
23. ddr2l ENSDARG00000103830 1921 1.66 - - - - - 0.744 0.916 - - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
24. nfkbiaa ENSDARG00000005481 948 1.657 - - - - - 0.763 0.894 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
25. myh14 ENSDARG00000073732 502 1.653 - - - - - 0.899 - 0.754 - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
26. bcar1 ENSDARG00000056525 6563 1.652 - - - - - 0.879 0.773 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
27. tmem18 ENSDARG00000036704 1784 1.65 - - - - - 0.881 0.769 - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
28. nrg1 ENSDARG00000104314 1081 1.649 - - - - - 0.879 - - 0.770 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
29. actr2a ENSDARG00000052438 5838 1.639 - - - - - 0.883 0.756 - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
30. tln1 ENSDARG00000100729 5744 1.639 - 0.783 - - - 0.856 - - - talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
31. anxa1c ENSDARG00000104359 23181 1.636 - - - - 0.741 0.895 - - - annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
32. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.634 - - - - - 0.731 - - 0.903 pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
33. capg capg 2569 1.633 - 0.838 - - - 0.795 - - -
34. zgc:91909 ENSDARG00000021287 1488 1.623 - - - - - 0.808 0.815 - - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
35. cdc20 ENSDARG00000100741 3264 1.623 - - - - - 0.878 0.745 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
36. piezo1 ENSDARG00000076870 4704 1.621 - 0.796 - - - - - - 0.825 piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
37. EPT1 EPT1 1912 1.621 - - - - - - 0.736 - 0.885
38. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.62 - - - - - - 0.847 - 0.773 signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
39. epn2 ENSDARG00000008377 5458 1.618 - - - - - 0.860 - - 0.758 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
40. IL17RD ENSDARG00000098359 2309 1.617 - - - - - 0.915 0.702 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
41. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.617 - 0.751 - - - 0.866 - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
42. si:zfos-364h11.1 99 1.616 - - - - - 0.833 - 0.783 - si:zfos-364h11.1, transcript variant X4
43. CABZ01027552.1 CABZ01027552.1 760 1.613 - - - - - 0.866 - 0.747 -
44. tpk1 ENSDARG00000038040, ENSDARG00000114161 334 1.611 - - - - - 0.869 - 0.742 - thiamin pyrophosphokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-176]
45. THEM6_1 ENSDARG00000103914 469 1.609 - - - - - 0.834 - 0.775 - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
46. mir203b 1077 1.608 - - - - - 0.797 0.811 - - microRNA 203b
47. dennd4c ENSDARG00000102766 897 1.606 - 0.877 - - - - - - 0.729 DENN/MADD domain containing 4C [Source:ZFIN;Acc:ZDB-GENE-120727-13]
48. tmem180 tmem180 430 1.605 - - - - - 0.832 - 0.773 -
49. man1b1 man1b1 3294 1.605 - - - - - - 0.777 - 0.828
50. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.604 - 0.721 - - - 0.883 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
51. si:ch73-52f15.5 ENSDARG00000095400 1368 1.595 - - - - - 0.778 0.817 - - si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
52. pvrl1b 1645 1.594 - 0.730 - - - 0.864 - - - poliovirus receptor-related 1b
53. CCDC64B CCDC64B 337 1.594 - - - - 0.746 0.848 - - -
54. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 1.588 - - - - - 0.774 0.814 - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
55. si:dkey-117n7.3 ENSDARG00000092944 2518 1.583 - - - - - 0.856 - - 0.727 si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
56. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 1.583 - - - - 0.723 0.860 - - - glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
57. pnp5a ENSDARG00000078619 1461 1.583 - - - - - 0.749 0.834 - - purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
58. CABZ01008011.1 CABZ01008011.1 761 1.582 - - - - - 0.814 - - 0.768
59. nufip2 ENSDARG00000069066 3965 1.58 - - - - - 0.823 0.757 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
60. adamts1 ENSDARG00000103519 539 1.576 - - - - - 0.841 - 0.735 - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
61. dhrs13a.2 ENSDARG00000111240 491 1.568 - - - - - 0.835 0.733 - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
62. cnih4 ENSDARG00000087759 3937 1.566 - - - - - - 0.864 0.702 - cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
63. fkbp2 ENSDARG00000044540 1615 1.561 - - - - - 0.803 - - 0.758 FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
64. MIA ENSDARG00000052437, ENSDARG00000116215 1220 1.56 - 0.739 - - - - 0.821 - - MIA SH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-081022-66]
65. mafk ENSDARG00000100947 1460 1.557 - 0.719 - - - 0.838 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
66. si:ch211-232i5.3 ENSDARG00000086874 1256 1.555 - - - - - 0.806 0.749 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
67. C5H8orf4 C5H8orf4 2740 1.554 - 0.797 - - - - - - 0.757
68. atrip ENSDARG00000063076 385 1.554 - - - - - - - 0.776 0.778 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
69. C21H5orf15 C21H5orf15 2318 1.553 - 0.703 - - - - - - 0.850
70. slu7 ENSDARG00000038870 1311 1.551 - - - - - - 0.781 - 0.770 SLU7 homolog, splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-62]
71. mrpl10 ENSDARG00000045091, ENSDARG00000112205 1187 1.551 - - - - - 0.826 - - 0.725 mitochondrial ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-050320-19]
72. lrba ENSDARG00000031108 2136 1.548 - 0.733 - - - 0.815 - - - LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
73. rab5c ENSDARG00000026712 4733 1.548 - - - - - 0.799 0.749 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
74. stt3b ENSDARG00000001890 1836 1.548 - - - - - 0.836 0.712 - - STT3B, subunit of the oligosaccharyltransferase complex (catalytic) [Source:ZFIN;Acc:ZDB-GENE-030131-2638]
75. SEC24A ENSDARG00000104375 2614 1.548 0.781 - - - - - - - 0.767 SEC24 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-120926-1]
76. brd4 ENSDARG00000078904 5367 1.546 - - - - - 0.830 0.716 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
77. ppl ENSDARG00000101043 9196 1.544 - - - - - 0.801 0.743 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
78. selj 884 1.541 - - - - - 0.836 0.705 - - selenoprotein J
79. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.539 - - - - - 0.747 - - 0.792 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
80. lama5 ENSDARG00000058543 2782 1.537 - 0.716 - - - 0.821 - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
81. mid1ip1b ENSDARG00000019302 1589 1.535 - - - - - 0.824 - - 0.711 MID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
82. bnip3lb ENSDARG00000028067 1029 1.53 - 0.763 - - - - 0.767 - - BCL2 interacting protein 3 like b [Source:ZFIN;Acc:ZDB-GENE-040325-1]
83. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.527 - - - - - - 0.777 - 0.750 ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
84. ywhabl ENSDARG00000040287 39045 1.522 - - - - - 0.774 0.748 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
85. magi3 magi3 962 1.522 - - - - - - 0.756 - 0.766
86. soul2 ENSDARG00000039499 1469 1.52 - 0.813 - - - 0.707 - - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
87. si:ch211-193k19.1 ENSDARG00000035660 636 1.519 - - - - - 0.811 0.708 - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
88. stam2 ENSDARG00000005318 2980 1.516 - - - - - - 0.724 - 0.792 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
89. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.515 - - - - - 0.720 0.795 - - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
90. ralgps2 ENSDARG00000026519 1610 1.515 - - - - 0.712 - - - 0.803 Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
91. brd8 ENSDARG00000025071 2605 1.514 - - - - - 0.760 - - 0.754 bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
92. cldne ENSDARG00000043128 6960 1.514 - 0.712 - - - - 0.802 - - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
93. klf15 ENSDARG00000091127 1037 1.512 - - - - - 0.760 - - 0.752 Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
94. efhd2 ENSDARG00000055759 7777 1.511 - 0.745 - - - 0.766 - - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
95. gpr137 ENSDARG00000037244 801 1.51 - 0.741 - - - - - 0.769 - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
96. gale ENSDARG00000002401 5489 1.51 - - - - - 0.767 0.743 - - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
97. tcea2 ENSDARG00000012927 440 1.51 - - - - - - - 0.734 0.776 transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985]
98. ftr83 ENSDARG00000025403, ENSDARG00000110533 1428 1.507 - - - - - 0.799 0.708 - - finTRIM family, member 83 [Source:ZFIN;Acc:ZDB-GENE-031002-11]
99. psph ENSDARG00000040314 1359 1.505 - 0.737 - - - - - - 0.768 phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
100. xpnpep1 ENSDARG00000029011 1723 1.504 - - - - - - 0.761 - 0.743 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]

There are 1551 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA