Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chmp5a

Gene Name Gene ID Reads Annotation
chmp5a ENSDARG00000038855 129 charged multivesicular body protein 5a [Source:ZFIN;Acc:ZDB-GENE-060503-60]










Genes with expression patterns similar to chmp5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chmp5a ENSDARG00000038855 129 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 charged multivesicular body protein 5a [Source:ZFIN;Acc:ZDB-GENE-060503-60]
2. CCDC57_1 CCDC57_1 35 1.733 - - - - - 0.967 0.766 - -
3. nrxn2a ENSDARG00000061454 291 1.689 - 0.845 - - - - 0.844 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
4. mif4gdb ENSDARG00000102578 31 1.663 - 0.834 - 0.829 - - - - - MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
5. npffr1l2 ENSDARG00000062631 127 1.621 - 0.755 - - - - 0.866 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
6. KCNB2 ENSDARG00000088842 35 1.619 - 0.853 - - - - 0.766 - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
7. si:ch211-247j9.1 ENSDARG00000079283 217 1.609 - 0.884 - - - - 0.725 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
8. zgc:114174 ENSDARG00000057884, ENSDARG00000109852 100 1.584 - 0.834 - 0.750 - - - - - zgc:114174 [Source:ZFIN;Acc:ZDB-GENE-050626-103]
9. syt4 ENSDARG00000036505 421 1.578 - 0.769 - - - - 0.809 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
10. rpgra ENSDARG00000056617 77 1.575 - - - 0.836 - 0.739 - - - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
11. atp8a1 ENSDARG00000063001 146 1.57 - - - - 0.859 - 0.711 - - ATPase phospholipid transporting 8A1 [Source:ZFIN;Acc:ZDB-GENE-060929-36]
12. emilin2a ENSDARG00000061196 57 1.563 - - - - - 0.861 0.702 - - elastin microfibril interfacer 2a [Source:ZFIN;Acc:ZDB-GENE-060503-247]
13. zgc:174712 zgc:174712 47 1.548 - - - - - 0.782 0.766 - -
14. NPPC_1 NPPC_1 11 1.547 - 0.845 - - - - 0.702 - -
15. RSF1_2 RSF1_2 1343 1.538 - - - - - - 0.821 - 0.717
16. cdk5r1a ENSDARG00000037916 46 1.529 - - - 0.827 - - 0.702 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
17. si:ch73-111m19.2 ENSDARG00000003077 43 1.518 - 0.816 - - - - 0.702 - - si:ch73-111m19.2 [Source:ZFIN;Acc:ZDB-GENE-130603-13]
18. phf20a ENSDARG00000002750 90 1.512 - - - - - 0.810 0.702 - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
19. NPDC1 NPDC1 126 1.507 - 0.756 - - - 0.751 - - -
20. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.496 - - - - - - 0.775 - 0.721 zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
21. mhc1uma ENSDARG00000039164 16 1.493 - 0.711 - - - 0.782 - - - major histocompatibility complex class I UMA [Source:ZFIN;Acc:ZDB-GENE-140820-1]
22. notchl ENSDARG00000088308 28 1.491 0.709 - - - - 0.782 - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
23. lhx1a ENSDARG00000014018 958 1.489 - - - - - - 0.715 - 0.774 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
24. CHD6 ENSDARG00000017244 219 1.487 0.785 - - - - - 0.702 - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
25. cryaa ENSDARG00000053502, ENSDARG00000113469 80 1.487 - - - - 0.705 0.782 - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
26. il13 ENSDARG00000077809 8 1.484 - - - - - 0.782 0.702 - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
27. MSANTD2 ENSDARG00000079474 121 1.481 - - - 0.774 - 0.707 - - - Myb/SANT DNA binding domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26266]
28. si:dkey-190g11.3 ENSDARG00000025914 49 1.461 - 0.742 - - - - 0.719 - - si:dkey-190g11.3 [Source:ZFIN;Acc:ZDB-GENE-081104-341]
29. casz1 ENSDARG00000037030 85 1.457 0.732 - - - - 0.725 - - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
30. ndrg4 ENSDARG00000103937 1234 1.454 - - - - - - 0.729 - 0.725 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
31. fsd1 ENSDARG00000062017 207 1.44 - - - - - - 0.729 - 0.711 fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
32. pcdh2ac ENSDARG00000099783 325 1.423 - 0.711 - - - - - - 0.712 protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
33. SGIP1 SGIP1 236 1.418 - 0.711 - - - - 0.707 - -
34. c1galt1a ENSDARG00000055585, ENSDARG00000112143 53 1.418 - - - - - 0.716 0.702 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a [Source:ZFIN;Acc:ZDB-GENE-061013-303]
35. RHOBTB1 ENSDARG00000079468 189 1.404 - - - - - - 0.702 - 0.702 Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
36. b3gat1 b3gat1 77 1 - - - - - - 1.000 - -
37. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 0.974 - - - - - - 0.974 - - guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
38. sox8 sox8 109 0.946 - - - - - - 0.946 - -
39. si:ch211-268b13.3 si:ch211-268b13.3 28 0.946 - - - - - - 0.946 - -
40. gtf3c6 ENSDARG00000043301 97 0.946 - - - - - - 0.946 - - general transcription factor IIIC, polypeptide 6, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1009]
41. syt8 syt8 82 0.942 - 0.942 - - - - - - -
42. tyr ENSDARG00000039077 568 0.938 - 0.938 - - - - - - - tyrosinase [Source:ZFIN;Acc:ZDB-GENE-991026-3]
43. SMAD4_3 SMAD4_3 131 0.919 - 0.919 - - - - - - -
44. chrng ENSDARG00000086647 676 0.918 - - - - - 0.918 - - - cholinergic receptor, nicotinic, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-3805]
45. CT027744.3 CT027744.3 5 0.91 - - - - - 0.910 - - -
46. si:ch211-28p3.4 ENSDARG00000091009 280 0.903 - 0.903 - - - - - - - si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]
47. CRTC1 47 0.903 0.903 - - - - - - - - CREB regulated transcription coactivator 1
48. GPR137B GPR137B 50 0.903 - - - - - - 0.903 - -
49. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 0.902 - - - 0.902 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
50. KIRREL3 ENSDARG00000115903 206 0.9 - - - - - - 0.900 - - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
51. lrrc4.2 ENSDARG00000003020 235 0.899 - - - - - - 0.899 - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
52. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 0.894 - - - - - - 0.894 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
53. PARP6 PARP6 119 0.888 - - - - - - 0.888 - -
54. st8sia1_1 ENSDARG00000098221 16 0.887 - - - - - - 0.887 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
55. mkxa ENSDARG00000075450, ENSDARG00000114299 233 0.887 - 0.887 - - - - - - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
56. GPR156 ENSDARG00000086215 126 0.887 - 0.887 - - - - - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
57. CCDC150 CCDC150 991 0.887 - - - - - - 0.887 - -
58. si:ch73-362m14.4 ENSDARG00000023940 88 0.887 - - - - - - 0.887 - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
59. myo10l3 ENSDARG00000074143 49 0.887 - 0.887 - - - - - - - myosin X-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-237]
60. hoxa2b ENSDARG00000023031 706 0.886 - - - - - - 0.886 - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
61. mirlet7i 192 0.885 - 0.885 - - - - - - - microRNA let-7i
62. slc45a1 ENSDARG00000004302 152 0.883 - - - - - - 0.883 - - solute carrier family 45, member 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2152]
63. CABZ01029822.1 ENSDARG00000086931 1654 0.883 - - - - - - 0.883 - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
64. sema4ab ENSDARG00000062352 409 0.882 - 0.882 - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
65. kcnt1 ENSDARG00000079484 45 0.882 - - - - - 0.882 - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
66. SNORA38 SNORA38 574 0.878 - 0.878 - - - - - - -
67. grk1a ENSDARG00000058803 13 0.877 - - - - - 0.877 - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
68. BAIAP2 BAIAP2 88 0.877 - - - - - 0.877 - - -
69. mms19 ENSDARG00000079067 65 0.877 - - - - - 0.877 - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
70. BX649458.1 BX649458.1 166 0.874 - - - - - - 0.874 - -
71. SLC16A1 SLC16A1 37 0.873 - - - 0.873 - - - - -
72. GRAMD2 GRAMD2 300 0.872 0.872 - - - - - - - -
73. TMTC2 TMTC2 478 0.872 - - - - - - 0.872 - -
74. si:ch73-299h12.1 ENSDARG00000102321 233 0.871 - - - - - 0.871 - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
75. DOCK2 66 0.871 - - - 0.871 - - - - - dedicator of cytokinesis 2
76. ENSDARG00000090222 ENSDARG00000090222 402 0.865 - - - - - - 0.865 - -
77. GFOD1 ENSDARG00000061363 67 0.861 - - - - - 0.861 - - - glucose-fructose oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21096]
78. AL935029.1 AL935029.1 514 0.857 - 0.857 - - - - - - -
79. sst3 61 0.856 - - - 0.856 - - - - - somatostatin 3
80. CABZ01036080.1 CABZ01036080.1 46 0.855 - - - - - - 0.855 - -
81. si:dkey-253d23.4 ENSDARG00000079762 1560 0.855 0.855 - - - - - - - - si:dkey-253d23.4 [Source:ZFIN;Acc:ZDB-GENE-050208-730]
82. ppp2r2ba 321 0.853 - - - - - - 0.853 - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
83. si:ch211-37p17.5 si:ch211-37p17.5 4 0.852 - - - 0.852 - - - - -
84. C9H3orf17 C9H3orf17 69 0.852 - 0.852 - - - - - - -
85. si:dkey-19n13.5 si:dkey-19n13.5 36 0.852 - - - 0.852 - - - - -
86. mxd ENSDARG00000023369 8 0.852 - - - 0.852 - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
87. si:dkey-81p22.11 ENSDARG00000093797 68 0.851 - - - - - - 0.851 - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
88. pax2b ENSDARG00000032578 12 0.851 - - - - - - 0.851 - - paired box 2b [Source:ZFIN;Acc:ZDB-GENE-001030-4]
89. si:dkey-256i11.4 si:dkey-256i11.4 3 0.851 - - - - - - 0.851 - -
90. slc5a2 ENSDARG00000100919 47 0.851 - - - - - - 0.851 - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
91. helb ENSDARG00000053127 235 0.851 - - - - - - 0.851 - - helicase (DNA) B [Source:ZFIN;Acc:ZDB-GENE-030729-16]
92. cdh10 cdh10 38 0.851 - - - - - - 0.851 - -
93. celf5 celf5 5 0.851 - - - - - - 0.851 - -
94. asb11 ENSDARG00000056561 39 0.851 - - - - - - 0.851 - - ankyrin repeat and SOCS box containing 11 [Source:ZFIN;Acc:ZDB-GENE-070112-532]
95. CU984579.1 ENSDARG00000116863 15 0.851 - - - - - - 0.851 - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
96. CU571255.1 CU571255.1 902 0.85 - 0.850 - - - - - - -
97. RFWD3 ENSDARG00000087752 167 0.849 - - - - - 0.849 - - - ring finger and WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-120529-1]
98. ATP5SL ATP5SL 130 0.849 - - - - - 0.849 - - -
99. slco1c1 ENSDARG00000016749 30 0.849 - - - 0.849 - - - - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
100. SNORA74 SNORA74 284 0.848 - - - - 0.848 - - - -

There are 850 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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