Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chka

Gene Name Gene ID Reads Annotation
chka ENSDARG00000041078, ENSDARG00000115973 468 choline kinase alpha [Source:ZFIN;Acc:ZDB-GENE-050208-149]










Genes with expression patterns similar to chka

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chka ENSDARG00000041078, ENSDARG00000115973 468 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 choline kinase alpha [Source:ZFIN;Acc:ZDB-GENE-050208-149]
2. si:dkey-100n23.5 ENSDARG00000086911 427 1.707 0.819 - - - - - - 0.888 - si:dkey-100n23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-347]
3. cobl_1 ENSDARG00000091006 293 1.68 - 0.784 - - - - 0.896 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
4. si:ch211-281g2.4 si:ch211-281g2.4 121 1.672 - 0.812 - - 0.860 - - - -
5. ABHD12B_1 ABHD12B_1 57 1.653 - - - - 0.885 - 0.768 - -
6. fbxo8 ENSDARG00000007477 603 1.644 - 0.805 - - - - - 0.839 - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
7. ing5a ENSDARG00000022413 268 1.633 - - - - 0.775 - - 0.858 - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
8. gchfr ENSDARG00000098588 169 1.628 - - - - - - 0.777 0.851 - GTP cyclohydrolase I feedback regulator [Source:ZFIN;Acc:ZDB-GENE-040426-1731]
9. dnajb13 ENSDARG00000043157 50 1.624 - 0.782 - - - - 0.842 - - DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
10. FAM98C FAM98C 225 1.606 - - - - 0.861 - 0.745 - -
11. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 1.597 - 0.794 - - 0.803 - - - - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
12. fam43a ENSDARG00000043009 792 1.594 - - - - 0.738 - - 0.856 - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
13. mgmt ENSDARG00000043275, ENSDARG00000111616 169 1.591 - 0.846 - - - 0.745 - - - O-6-methylguanine-DNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-120614-1]
14. rbpms2b ENSDARG00000079578 436 1.582 - 0.811 - - - - 0.771 - - RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]
15. C10H21orf59 275 1.567 - 0.731 - - - - - 0.836 - c10h21orf59 homolog (H. sapiens)
16. TMEM260 ENSDARG00000076362 63 1.565 - 0.738 - - - - 0.827 - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
17. twist3 ENSDARG00000019646 1221 1.561 - 0.846 - - - - - 0.715 - twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
18. si:ch211-102c2.8 ENSDARG00000093823 168 1.538 0.729 - - - - - - 0.809 - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
19. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.535 - 0.739 - - - - - 0.796 - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
20. tekt2 ENSDARG00000028973 160 1.534 0.728 - - - - - 0.806 - - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
21. cdr2l ENSDARG00000026834 254 1.534 - - - - 0.824 - 0.710 - - cerebellar degeneration-related protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-8171]
22. tbc1d22a ENSDARG00000045510 363 1.527 - 0.790 - - 0.737 - - - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
23. arhgap31 ENSDARG00000059472 23 1.513 - 0.731 - - - - 0.782 - - Rho GTPase activating protein 31 [Source:ZFIN;Acc:ZDB-GENE-100922-256]
24. nsmce1 ENSDARG00000098780 289 1.512 - 0.760 - - - - 0.752 - - NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
25. eml3 ENSDARG00000058038 449 1.505 0.782 - - - - - 0.723 - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
26. cyb5d2 ENSDARG00000061006, ENSDARG00000109422 75 1.505 - 0.758 - - - - 0.747 - - cytochrome b5 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050506-83]
27. cxcl-c5c cxcl-c5c 182 1.504 - - - - 0.789 - 0.715 - -
28. naif1 ENSDARG00000062753 176 1.488 - 0.703 - - 0.785 - - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
29. ftr78 ftr78 273 1.481 - 0.763 - - 0.718 - - - -
30. dera ENSDARG00000005897 406 1.472 - 0.741 - - - - 0.731 - - deoxyribose-phosphate aldolase (putative) [Source:ZFIN;Acc:ZDB-GENE-041010-200]
31. cep70 ENSDARG00000076965 140 1.446 0.710 0.736 - - - - - - - centrosomal protein 70 [Source:ZFIN;Acc:ZDB-GENE-070705-311]
32. stard13b ENSDARG00000098954 700 1.446 0.733 - - - - - - 0.713 - StAR-related lipid transfer (START) domain containing 13b [Source:ZFIN;Acc:ZDB-GENE-050506-146]
33. creb3l2 ENSDARG00000063563 1284 1.443 - 0.718 - - 0.725 - - - - cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
34. snx8a ENSDARG00000074842 411 1.429 - 0.713 - - - - 0.716 - - sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
35. mknk1 ENSDARG00000018411 749 1.429 - 0.727 - - 0.702 - - - - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
36. yy1a ENSDARG00000042796 4982 1.414 - 0.703 - - - 0.711 - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
37. mfsd6b ENSDARG00000054583 239 0.94 0.940 - - - - - - - - major facilitator superfamily domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040912-84]
38. ptx3a ENSDARG00000068275 589 0.931 - - - - - - - 0.931 - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
39. si:dkey-242k1.6 ENSDARG00000101205 112 0.924 - - - - 0.924 - - - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
40. cplx3b ENSDARG00000089486 315 0.924 - - - - - - - 0.924 - complexin 3b [Source:ZFIN;Acc:ZDB-GENE-091204-403]
41. zgc:174697 zgc:174697 128 0.923 - - - - - - - 0.923 -
42. COL23A1 COL23A1 461 0.92 0.920 - - - - - - - -
43. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 0.914 - - - - 0.914 - - - -
44. irf7 ENSDARG00000045661 76 0.913 - 0.913 - - - - - - - interferon regulatory factor 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1518]
45. bmp1b ENSDARG00000028053 25 0.913 - - - - 0.913 - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
46. parvg ENSDARG00000067711 147 0.913 - - - - - - 0.913 - - parvin, gamma [Source:ZFIN;Acc:ZDB-GENE-070410-67]
47. nub1 ENSDARG00000061417 33 0.912 - - - - 0.912 - - - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
48. ndufaf3 ENSDARG00000112931 743 0.911 - - - - - - - 0.911 - NADH:ubiquinone oxidoreductase complex assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-282]
49. cep55l ENSDARG00000102349 604 0.908 - 0.908 - - - - - - - centrosomal protein 55 like [Source:ZFIN;Acc:ZDB-GENE-050522-222]
50. si:ch211-198k9.10 si:ch211-198k9.10 47 0.907 - - - - 0.907 - - - -
51. eef1a1b ENSDARG00000069951 35 0.907 - - - - 0.907 - - - - eukaryotic translation elongation factor 1 alpha 1b [Source:ZFIN;Acc:ZDB-GENE-050417-327]
52. si:dkey-197d18.2 si:dkey-197d18.2 10 0.907 - - - - 0.907 - - - -
53. CDR2 CDR2 384 0.906 - - - - 0.906 - - - -
54. grin2cb ENSDARG00000077560 9 0.906 - - - - 0.906 - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
55. ARHGEF40 ENSDARG00000078979 25 0.906 - - - - 0.906 - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
56. arl11l arl11l 31 0.906 - - - - 0.906 - - - -
57. RBBP6_2 RBBP6_2 23 0.904 - - - - 0.904 - - - -
58. tfpia ENSDARG00000034718 1257 0.904 - 0.904 - - - - - - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
59. BX569789.2 BX569789.2 12 0.904 - - - - 0.904 - - - -
60. TRIM14_13 TRIM14_13 18 0.903 - - - - 0.903 - - - -
61. CABZ01061717.1 CABZ01061717.1 320 0.902 - - - - 0.902 - - - -
62. aamdc ENSDARG00000103957 173 0.902 - - - - - - - 0.902 - adipogenesis associated, Mth938 domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-64]
63. slc9a6b ENSDARG00000075382 151 0.902 - 0.902 - - - - - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6b [Source:ZFIN;Acc:ZDB-GENE-080226-2]
64. uaca uaca 140 0.899 - - - - - - - 0.899 -
65. BX572619.1 ENSDARG00000089303 78 0.899 - - - - 0.899 - - - - wu:fa25f02 [Source:NCBI gene;Acc:562425]
66. si:rp71-80o10.4 ENSDARG00000094316 279 0.898 - - - - - - - 0.898 - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
67. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 0.897 0.897 - - - - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
68. si:dkey-32m20.1 43 0.897 - - - - 0.897 - - - - si:dkey-32m20.1
69. zgc:153911 ENSDARG00000002509 110 0.897 - - - - 0.897 - - - - zgc:153911 [Source:ZFIN;Acc:ZDB-GENE-061013-174]
70. erfl3 ENSDARG00000062801 149 0.897 - 0.897 - - - - - - - Ets2 repressor factor like 3 [Source:ZFIN;Acc:ZDB-GENE-090529-4]
71. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.896 - - - - - - - 0.896 - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
72. nlgn1 ENSDARG00000077710 72 0.895 - - - - 0.895 - - - - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
73. MSL1 MSL1 223 0.895 - 0.895 - - - - - - -
74. si:dkey-31e10.6 si:dkey-31e10.6 113 0.895 - - - - - - - 0.895 -
75. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 0.894 - - - - 0.894 - - - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
76. rgs17 ENSDARG00000039435 590 0.894 - 0.894 - - - - - - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
77. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 0.893 - - - - 0.893 - - - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
78. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 0.893 - - - - 0.893 - - - -
79. BX927351.1 ENSDARG00000096844 125 0.893 - - - - - - - 0.893 -
80. RNF14 ENSDARG00000043905 41 0.893 - - - - - - - 0.893 - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
81. zgc:158417 ENSDARG00000101671 46 0.892 - - - - - - - 0.892 - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
82. npffr2.1 npffr2.1 60 0.892 - - - - - - - 0.892 -
83. si:ch211-232m8.3 ENSDARG00000095092 161 0.892 - - - - - - - 0.892 - si:ch211-232m8.3 [Source:ZFIN;Acc:ZDB-GENE-081107-22]
84. tlr18 ENSDARG00000040249 45 0.891 - - - - - - - 0.891 - toll-like receptor 18 [Source:ZFIN;Acc:ZDB-GENE-040220-2]
85. si:dkeyp-104f11.9 ENSDARG00000096715 81 0.89 - - - - - - - 0.890 - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
86. STARD10 ENSDARG00000097718 181 0.89 - - - - - - - 0.890 - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
87. CU367845.1_1 CU367845.1_1 43 0.89 - - - - - - - 0.890 -
88. SCYL1 ENSDARG00000079854 78 0.89 - - - - - - - 0.890 - SCY1-like, kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8915]
89. fanci ENSDARG00000026224 415 0.89 - - - - - - - 0.890 - FA complementation group I [Source:ZFIN;Acc:ZDB-GENE-030131-2905]
90. rlf ENSDARG00000063553 1339 0.888 - - - - - - 0.888 - - rearranged L-myc fusion [Source:ZFIN;Acc:ZDB-GENE-050208-257]
91. si:ch211-207d6.2 ENSDARG00000031658 93 0.888 - - - - - - - 0.888 - si:ch211-207d6.2 [Source:ZFIN;Acc:ZDB-GENE-070912-185]
92. vwa2 ENSDARG00000075441 44 0.888 - 0.888 - - - - - - - von Willebrand factor A domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100302-1]
93. slc44a1b ENSDARG00000090982 240 0.887 - - - - - - - 0.887 - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
94. snx29 ENSDARG00000077317 239 0.886 - - - - - - - 0.886 - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
95. glra1 ENSDARG00000012019 315 0.886 - - - - 0.886 - - - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
96. BX908759.1 BX908759.1 52 0.886 - - - - - - - 0.886 -
97. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 0.885 - 0.885 - - - - - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
98. BACH1 BACH1 1021 0.884 - 0.884 - - - - - - -
99. CABZ01049802.1 CABZ01049802.1 195 0.884 - - - - - - - 0.884 -
100. si:dkey-77f17.1 si:dkey-77f17.1 83 0.884 - - - - - - - 0.884 -

There are 1160 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA