Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chga

Gene Name Gene ID Reads Annotation
chga ENSDARG00000008829 1086 chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]










Genes with expression patterns similar to chga

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chga ENSDARG00000008829 1086 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
2. calca ENSDARG00000056590 150 2.741 0.875 - - - - 0.889 0.977 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
3. nes ENSDARG00000088805 2710 2.704 0.908 - - - - 0.849 0.947 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
4. CU928222.1 ENSDARG00000097436 1662 2.703 0.945 - - - - 0.839 0.919 - -
5. si:dkey-169l5.3 si:dkey-169l5.3 239 2.701 0.841 - - - - 0.921 0.939 - -
6. prdm8 ENSDARG00000025017 370 2.689 0.951 - - - - 0.841 0.897 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
7. WNK2 ENSDARG00000104989 429 2.687 0.706 - - 0.999 - - 0.982 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
8. nhlh2 ENSDARG00000025495 1860 2.686 0.931 - - - - 0.802 0.953 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
9. nkx6.2 ENSDARG00000104735 5081 2.684 0.804 - - - - 0.932 0.948 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
10. chat chat 463 2.683 0.873 - - - - 0.863 0.947 - -
11. lrrtm1 ENSDARG00000052713 1041 2.677 - - - 0.998 - 0.774 0.905 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
12. SLC5A7 SLC5A7 453 2.676 0.746 - - - - 0.942 0.988 - -
13. CABZ01029738.1 CABZ01029738.1 327 2.66 0.883 - - - - 0.901 0.876 - -
14. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.66 0.810 - - - - 0.900 0.950 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
15. tmie ENSDARG00000069423 305 2.657 0.870 - - - - 0.871 0.916 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
16. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.645 0.855 - - - - 0.819 0.971 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
17. neurog1 ENSDARG00000056130 3924 2.634 0.773 - - - - 0.897 0.964 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
18. prdm12b ENSDARG00000007430 914 2.622 0.953 - - - - 0.703 0.966 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
19. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.606 0.798 - - - - 0.850 0.958 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
20. sept5a ENSDARG00000013843 1206 2.596 - - - 0.997 - 0.702 0.897 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
21. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.594 0.947 - - - - 0.716 0.931 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
22. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 2.577 0.909 - - - - 0.841 0.827 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
23. ENTHD1 ENTHD1 235 2.576 0.807 - - - - 0.849 0.920 - -
24. nell2b ENSDARG00000062797 854 2.574 0.846 - - - - 0.769 0.959 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
25. nova2 ENSDARG00000017673 7685 2.572 0.860 - - - - 0.772 0.940 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
26. ctnnd2b ENSDARG00000003779 964 2.569 0.826 - - - - 0.815 0.928 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
27. dbx1a ENSDARG00000086393 3161 2.569 0.876 - - - - 0.776 0.917 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
28. her2 ENSDARG00000038205 3219 2.553 0.795 - - - - 0.809 0.949 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
29. slc18a3a ENSDARG00000006356 1285 2.552 0.780 - - - - 0.802 0.970 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
30. fyna ENSDARG00000011370 1679 2.542 0.846 - - - - 0.822 0.874 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
31. BX511121.1 ENSDARG00000029997 1774 2.529 0.729 - - - - 0.900 0.900 - -
32. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.514 0.756 - - - - 0.859 0.899 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
33. sema3c ENSDARG00000034300 881 2.505 0.793 - - - - 0.766 0.946 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
34. CABZ01111990.1 CABZ01111990.1 4374 2.503 0.713 - - - - 0.823 0.967 - -
35. CABZ01028287.1 CABZ01028287.1 626 2.5 0.908 - - - - 0.765 0.827 - -
36. syt12 ENSDARG00000101776 215 2.495 0.811 - - - - 0.779 0.905 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
37. vim ENSDARG00000010008 3551 2.495 0.894 - - - - 0.788 0.813 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
38. sst1.1 ENSDARG00000040799 677 2.485 0.763 - - - - 0.920 0.802 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
39. sv2c ENSDARG00000059997 592 2.479 0.779 - - - - 0.788 0.912 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
40. si:ch211-247j9.1 ENSDARG00000079283 217 2.471 0.794 - - - - 0.818 0.859 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
41. gfra1b ENSDARG00000102564 821 2.468 0.825 - - - - 0.716 0.927 - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
42. EPB41L1 EPB41L1 1896 2.465 0.727 - - - - 0.772 0.966 - -
43. dlg4 88 2.463 0.778 - - - - 0.861 0.824 - - discs large MAGUK scaffold protein 4, transcript variant X5
44. clstn1 ENSDARG00000031720 5286 2.438 0.764 - - - - 0.758 0.916 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
45. nadl1.1 1200 2.437 0.704 - - - - 0.745 0.988 - - neural adhesion molecule L1.1, transcript variant X1
46. CHRNB4 ENSDARG00000101677 128 2.434 0.919 - - - - 0.725 0.790 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
47. epha4b ENSDARG00000011600 3110 2.434 0.748 - - - - 0.731 0.955 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
48. hmgb1b ENSDARG00000030479 10398 2.42 0.748 - - - - 0.745 0.927 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
49. CHL1 CHL1 1553 2.409 0.781 - - - - 0.789 0.839 - -
50. hnrnpa3 ENSDARG00000059351 453 2.408 0.784 - - - - 0.867 0.757 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
51. her12 ENSDARG00000032963 754 2.386 0.732 - - - - 0.758 0.896 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
52. hmgb3a ENSDARG00000056725 15668 2.378 - - - 0.802 - 0.739 0.837 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
53. pacsin1b ENSDARG00000042128 1051 2.374 - 0.716 - - - 0.769 0.889 - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
54. dpysl5b ENSDARG00000059311 600 2.372 0.754 - - - - 0.764 0.854 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
55. ptprnb ENSDARG00000077047 2743 2.366 0.733 - - - - 0.796 0.837 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
56. mtf2 ENSDARG00000005590 82 2.346 0.771 0.820 - - - - 0.755 - - metal response element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-060512-94]
57. myt1b ENSDARG00000102879 5411 2.326 0.729 - - - - 0.703 0.894 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
58. CDK5R1 CDK5R1 562 2.305 0.720 - - - - 0.814 0.771 - -
59. flrt1b ENSDARG00000075597 465 2.291 0.861 - - - - 0.709 0.721 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
60. zgc:113531 ENSDARG00000038794 2063 2.273 0.703 - - - - 0.812 0.758 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
61. SBK1 SBK1 154 2.25 0.818 0.713 - - - - 0.719 - -
62. CABZ01070258.1 ENSDARG00000105687 3643 1.946 - - - 0.982 - - 0.964 - -
63. pax6a ENSDARG00000103379 3061 1.912 - - - 0.979 - - 0.933 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
64. hmp19 2554 1.909 0.948 - - - - - 0.961 - - HMP19 protein
65. gnao1a ENSDARG00000016676 8184 1.906 - - - 0.963 - - 0.943 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
66. lhx4 ENSDARG00000039458 328 1.889 - - - - - 0.929 0.960 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
67. nrarpb ENSDARG00000018958 6225 1.888 0.933 - - - - - 0.955 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
68. im:7162084 im:7162084 665 1.883 - - - - - 0.917 0.966 - -
69. CABZ01080599.2 CABZ01080599.2 192 1.882 - - - - - 0.917 0.965 - -
70. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.88 0.909 - - - - - 0.971 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
71. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.874 0.903 - - - - - 0.971 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
72. tac1 ENSDARG00000014490 781 1.87 0.930 - - - - 0.940 - - - tachykinin 1 [Source:ZFIN;Acc:ZDB-GENE-060503-904]
73. cdk5r2a ENSDARG00000071011 167 1.868 - - - - - 0.905 0.963 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
74. zic4 ENSDARG00000031307 1228 1.864 - - - 0.994 - - 0.870 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
75. gfap ENSDARG00000025301 5584 1.849 0.869 - - - - - 0.980 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
76. cdh7 582 1.834 - - - - - 0.849 0.985 - - cadherin 7, type 2, transcript variant X1
77. kif5c ENSDARG00000076027 424 1.827 - - - - - 0.897 0.930 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
78. her13 ENSDARG00000007097 2000 1.826 0.904 - - - - - 0.922 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
79. jph3 ENSDARG00000102204 175 1.822 - - - - - 0.878 0.944 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
80. elavl3 ENSDARG00000014420 8644 1.82 - - - - - 0.858 0.962 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
81. lhfpl4a ENSDARG00000111810 206 1.81 - - - - - 0.937 0.873 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
82. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.809 - - - - - 0.867 0.942 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
83. slc35g2b ENSDARG00000045447 378 1.805 0.860 - - - - - 0.945 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
84. otpa ENSDARG00000014201 2290 1.805 - - - 0.983 - - 0.822 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
85. si:ch73-21g5.7 ENSDARG00000093156 9412 1.804 0.845 - - - - - 0.959 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
86. SSBP4 ENSDARG00000056483 5156 1.802 - - - 0.975 - - 0.827 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
87. her4.3 ENSDARG00000070770 613 1.8 - - - - - 0.844 0.956 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
88. pcp4a ENSDARG00000053130 1024 1.799 0.878 - - - - - 0.921 - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
89. GJD2 GJD2 1351 1.798 0.854 - - - - - 0.944 - -
90. tmem35 ENSDARG00000052567 5685 1.796 - - - - - 0.867 0.929 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
91. GADD45G GADD45G 382 1.789 - - - - - 0.821 0.968 - -
92. FAM171A2 FAM171A2 707 1.787 0.854 - - - - - 0.933 - -
93. neurod neurod 1189 1.784 0.908 - - - - 0.876 - - -
94. dla ENSDARG00000010791 9281 1.783 0.827 - - - - - 0.956 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
95. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.781 - - - - - 0.824 0.957 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
96. STMN3 ENSDARG00000038465 1009 1.777 - - - - - 0.807 0.970 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
97. ADAMTS3 ENSDARG00000060127 2839 1.777 - - - - - 0.882 0.895 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
98. her4.1 ENSDARG00000056732 1264 1.776 0.897 - - - - - 0.879 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
99. pou3f3a ENSDARG00000042032 2835 1.776 - - - - - 0.828 0.948 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
100. sv2bb ENSDARG00000060711 196 1.77 - - - - - 0.798 0.972 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]

There are 1894 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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