Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chfr

Gene Name Gene ID Reads Annotation
chfr ENSDARG00000075347 664 checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]










Genes with expression patterns similar to chfr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chfr ENSDARG00000075347 664 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]
2. furinb ENSDARG00000070971 213 2.2 - - 0.718 0.766 - 0.716 - - - furin (paired basic amino acid cleaving enzyme) b [Source:ZFIN;Acc:ZDB-GENE-040901-2]
3. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.751 - 0.850 - - - - 0.901 - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
4. si:ch73-257c13.2 ENSDARG00000074305 197 1.723 - - - - - 0.801 0.922 - - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
5. slc6a11a ENSDARG00000074002 189 1.71 - 0.878 - - - - 0.832 - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
6. DIDO1 ENSDARG00000057940 312 1.705 - 0.844 - - - - 0.861 - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
7. TTBK2 TTBK2 303 1.69 - 0.914 - - - - - 0.776 -
8. PEG3_22 PEG3_22 33 1.682 - 0.866 - - - - 0.816 - -
9. LSM5 ENSDARG00000071573 371 1.658 - 0.893 - 0.765 - - - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
10. eif2ak2 ENSDARG00000068729 184 1.653 - 0.813 - - - - 0.840 - - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
11. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.646 - 0.779 - - - - 0.867 - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
12. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.637 - 0.844 - 0.793 - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
13. rabgef1l ENSDARG00000015968 38 1.619 - 0.768 - - - - 0.851 - - RAB guanine nucleotide exchange factor (GEF) 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-813]
14. ttc33 ENSDARG00000035406, ENSDARG00000111770 82 1.618 - 0.872 - - - 0.746 - - - tetratricopeptide repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040718-480]
15. slc38a6 ENSDARG00000054312 112 1.616 - 0.799 0.817 - - - - - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
16. ttpal ENSDARG00000070644, ENSDARG00000112925 471 1.609 - - - - - - 0.784 0.825 - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
17. tex15 ENSDARG00000098929 60 1.608 - - - 0.814 - - 0.794 - - testis expressed 15 [Source:ZFIN;Acc:ZDB-GENE-091204-395]
18. eps15l1a ENSDARG00000042670 1565 1.605 - - - 0.722 - - - 0.883 - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
19. pacsin2 ENSDARG00000078014 1582 1.597 - - - 0.897 - - 0.700 - - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
20. mntb ENSDARG00000073988 1023 1.592 - 0.801 - 0.791 - - - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
21. gcdhl gcdhl 38 1.587 - 0.878 - - - - - 0.709 -
22. FHOD1 ENSDARG00000051768 43 1.579 - 0.878 0.701 - - - - - - formin homology 2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110623-4]
23. slc1a7a ENSDARG00000034940 149 1.572 - 0.842 - - - - 0.730 - - solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
24. tbc1d15 ENSDARG00000057218 224 1.57 - 0.808 - - - - 0.762 - - TBC1 domain family, member 15 [Source:ZFIN;Acc:ZDB-GENE-041111-251]
25. dync1li2 ENSDARG00000035924, ENSDARG00000110202 1429 1.564 - - - 0.807 - - - 0.757 - dynein, cytoplasmic 1, light intermediate chain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-156]
26. klhl23 ENSDARG00000078475 92 1.56 - - - 0.794 - 0.766 - - - kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
27. dph1 ENSDARG00000057973 191 1.558 - 0.817 - 0.741 - - - - - diphthamide biosynthesis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-411]
28. itga1 ENSDARG00000074316, ENSDARG00000116602 610 1.555 - 0.840 - - - - 0.715 - - integrin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-091118-115]
29. ripk4 ENSDARG00000043211 775 1.55 - - - 0.808 - - 0.742 - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
30. CR383676.3 CR383676.3 2650 1.546 - - - - - - 0.728 0.818 -
31. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 1.541 - 0.789 0.752 - - - - - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
32. CABZ01081749.1 CABZ01081749.1 637 1.523 - - - 0.756 - - - 0.767 -
33. pgpep1 ENSDARG00000054666 489 1.523 0.731 - - - - - 0.792 - - pyroglutamyl-peptidase I [Source:ZFIN;Acc:ZDB-GENE-050522-88]
34. nanp ENSDARG00000075143, ENSDARG00000114467 328 1.519 - 0.728 - - - - 0.791 - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
35. TMEM221 TMEM221 62 1.518 - - - - - 0.763 0.755 - -
36. dennd6b ENSDARG00000011605 412 1.517 - - - 0.725 - - 0.792 - - DENN/MADD domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-030131-9382]
37. coe2 coe2 1633 1.506 - 0.779 - - - - - - 0.727
38. ENSDARG00000035683 ENSDARG00000035683 219 1.502 - - 0.753 - - - 0.749 - -
39. KBTBD2 ENSDARG00000087226 707 1.499 - 0.741 - 0.758 - - - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
40. aga ENSDARG00000004889, ENSDARG00000114305 368 1.493 - 0.731 0.762 - - - - - - aspartylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-040426-2311]
41. srxn1 ENSDARG00000079160 265 1.49 - - 0.763 - - - 0.727 - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
42. clasp1a ENSDARG00000010280 1158 1.488 - - - 0.725 - - - 0.763 - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
43. mknk1 ENSDARG00000018411 749 1.488 - 0.787 - - - - - 0.701 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
44. rbm27 ENSDARG00000060521 185 1.486 - - 0.780 - - - - 0.706 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
45. CABZ01039859.1 ENSDARG00000076361 540 1.479 - - - - - - 0.770 0.709 - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
46. si:ch211-67e16.2 41 1.47 - - - - - - 0.765 0.705 - si:ch211-67e16.2, transcript variant X2
47. klf2a ENSDARG00000042667, ENSDARG00000113441 588 1.467 - - 0.745 0.722 - - - - - Kruppel-like factor 2a [Source:ZFIN;Acc:ZDB-GENE-011109-1]
48. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.466 - 0.746 - - - - - 0.720 - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
49. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.433 - - 0.720 - - - 0.713 - - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
50. sephs1 ENSDARG00000058292 3347 1.433 - - - - - - 0.720 0.713 - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
51. ntn2 ENSDARG00000076748 368 1.425 - - 0.703 0.722 - - - - - netrin 2 [Source:ZFIN;Acc:ZDB-GENE-050310-2]
52. gnsa ENSDARG00000023766 545 1.409 - - - - - - 0.707 0.702 - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
53. CT583728.14 ENSDARG00000112295 911 0.946 - - - - - - 0.946 - -
54. si:ch211-281g2.4 si:ch211-281g2.4 121 0.944 - 0.944 - - - - - - -
55. gadd45aa ENSDARG00000043581 114 0.941 - 0.941 - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
56. KRT23 KRT23 1443 0.936 - - - - - - 0.936 - -
57. macrod1 ENSDARG00000029609 66 0.935 - 0.935 - - - - - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
58. si:ch211-207m11.3 si:ch211-207m11.3 401 0.932 - 0.932 - - - - - - -
59. fgfbp1 fgfbp1 445 0.929 - 0.929 - - - - - - -
60. SLC5A8 ENSDARG00000087120 60 0.928 - 0.928 - - - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-141211-63]
61. asap3 ENSDARG00000021896 19 0.924 - 0.924 - - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
62. CU929225.1 CU929225.1 104 0.924 - 0.924 - - - - - - -
63. smyd3 ENSDARG00000058050 69 0.922 - 0.922 - - - - - - - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
64. DDAH1 ENSDARG00000103042 101 0.921 - 0.921 - - - - - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:406561]
65. retsatl ENSDARG00000034989 41 0.921 - 0.921 - - - - - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
66. ints3 ENSDARG00000016811 339 0.915 - 0.915 - - - - - - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
67. iqch ENSDARG00000015476, ENSDARG00000111143 34 0.912 - - - - - - 0.912 - - IQ motif containing H [Source:ZFIN;Acc:ZDB-GENE-050419-242]
68. zgc:174700_1 zgc:174700_1 60 0.911 - 0.911 - - - - - - -
69. crygm2d3 ENSDARG00000088823 1560 0.911 - 0.911 - - - - - - - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
70. DHDH DHDH 15 0.911 - 0.911 - - - - - - -
71. edn2 ENSDARG00000070578 276 0.911 - - - - - - 0.911 - - endothelin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-774]
72. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 0.911 - 0.911 - - - - - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
73. BX005272.1 BX005272.1 553 0.907 - - - - - - 0.907 - -
74. cuedc1a ENSDARG00000068716 232 0.907 - 0.907 - - - - - - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
75. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 0.907 - 0.907 - - - - - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
76. egr3 ENSDARG00000089156 71 0.907 - 0.907 - - - - - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
77. ssbp3a ENSDARG00000058237 87 0.907 - 0.907 - - - - - - - single stranded DNA binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-070705-484]
78. bmb ENSDARG00000096603 120 0.906 - 0.906 - - - - - - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
79. fbxo15 ENSDARG00000016897 18 0.906 - 0.906 - - - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
80. sirt6 ENSDARG00000102963 766 0.906 - 0.906 - - - - - - - sirtuin 6 [Source:ZFIN;Acc:ZDB-GENE-031007-2]
81. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 0.906 - 0.906 - - - - - - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
82. HEATR2_1 HEATR2_1 166 0.904 - 0.904 - - - - - - -
83. eed ENSDARG00000099640 143 0.904 - 0.904 - - - - - - - embryonic ectoderm development [Source:ZFIN;Acc:ZDB-GENE-050417-287]
84. PEG3_40 PEG3_40 186 0.904 - 0.904 - - - - - - -
85. timeless ENSDARG00000078497 1114 0.903 - 0.903 - - - - - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
86. ptpn23b ENSDARG00000098689 351 0.901 - 0.901 - - - - - - - protein tyrosine phosphatase, non-receptor type 23, b [Source:ZFIN;Acc:ZDB-GENE-060503-179]
87. cep55l ENSDARG00000102349 604 0.895 - 0.895 - - - - - - - centrosomal protein 55 like [Source:ZFIN;Acc:ZDB-GENE-050522-222]
88. C10H5orf28 C10H5orf28 339 0.894 - 0.894 - - - - - - -
89. si:dkey-253d23.5 ENSDARG00000058566 237 0.893 - 0.893 - - - - - - - si:dkey-253d23.5 [Source:ZFIN;Acc:ZDB-GENE-050208-729]
90. fam151b ENSDARG00000020024 255 0.893 - - - - - - 0.893 - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
91. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 0.892 - - - - - - 0.892 - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
92. slc10a4 ENSDARG00000009131 51 0.892 - 0.892 - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
93. MYH9 MYH9 158 0.891 - 0.891 - - - - - - -
94. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 0.891 - - - - - - 0.891 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
95. tmem130 ENSDARG00000103789 756 0.889 - 0.889 - - - - - - - transmembrane protein 130 [Source:ZFIN;Acc:ZDB-GENE-080204-23]
96. si:dkey-242k1.4 136 0.889 - 0.889 - - - - - - - si:dkey-242k1.4
97. PEA15 ENSDARG00000079771 80 0.887 - 0.887 - - - - - - - proliferation and apoptosis adaptor protein 15 [Source:ZFIN;Acc:ZDB-GENE-170119-2]
98. OTOF OTOF 195 0.887 - 0.887 - - - - - - -
99. ANKS3 ENSDARG00000038557 235 0.887 - 0.887 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080204-51]
100. si:dkey-8k3.2 ENSDARG00000038424 285 0.886 - 0.886 - - - - - - - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]

There are 1305 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA