Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chd5

Gene Name Gene ID Reads Annotation
chd5 ENSDARG00000105083 132 chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]










Genes with expression patterns similar to chd5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chd5 ENSDARG00000105083 132 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
2. BX322612.1 BX322612.1 236 2 - - - - - - 1.000 1.000 -
3. CU459152.1 CU459152.1 407 1.859 - - - - - - 1.000 0.859 -
4. PEG3_20 PEG3_20 6 1.815 - - - - - - 1.000 - 0.815
5. si:dkey-208n4.1 si:dkey-208n4.1 10 1.779 - - - - - - 1.000 - 0.779
6. DEDD ENSDARG00000029783 530 1.762 - - - - 0.763 - - 0.999 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
7. CU984579.1 ENSDARG00000116863 15 1.752 - - 0.916 - - - 0.836 - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
8. fezf1 ENSDARG00000010270 379 1.745 - - 0.760 - - - - 0.985 - FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
9. ift20 ENSDARG00000040556 285 1.73 - - - - 0.731 - - 0.999 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
10. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.711 - - - - - - - 0.972 0.739 LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
11. slc1a2b ENSDARG00000102453 3136 1.708 - 0.765 - - - - - 0.943 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
12. CABZ01075242.1 ENSDARG00000114227 9 1.704 - 0.704 - - - - 1.000 - -
13. tnika ENSDARG00000056218 728 1.701 - 0.710 - - - - - 0.991 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
14. si:ch73-92e20.2 si:ch73-92e20.2 2 1.695 - - 0.916 - - - - - 0.779
15. si:busm1-57f23.1 ENSDARG00000074425 418 1.67 - - - - 0.799 - 0.871 - - si:busm1-57f23.1 [Source:ZFIN;Acc:ZDB-GENE-030616-512]
16. sox12 ENSDARG00000025847 681 1.608 - 0.704 - - - - - 0.904 - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
17. ripply1 ENSDARG00000054103 367 1.603 - - - - 0.787 - 0.816 - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
18. si:dkeyp-79c2.1 42 1.585 - 0.704 - - - - 0.881 - - si:dkeyp-79c2.1, transcript variant X2
19. foxg1a ENSDARG00000070769 928 1.573 - - 0.811 - - - - - 0.762 forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
20. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1.552 - - 0.818 - - - - - 0.734 cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
21. C11H3orf14 C11H3orf14 15 1.546 - 0.821 - - - - - - 0.725
22. TMC2 TMC2 5 1.545 - 0.704 0.841 - - - - - -
23. crmp1 ENSDARG00000056742 332 1.542 - - - - - - 0.806 - 0.736 collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
24. cdh10 cdh10 38 1.54 - 0.704 - - - - 0.836 - -
25. slc17a6b ENSDARG00000041150 823 1.528 - 0.704 - - - - - 0.824 - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
26. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.519 - 0.795 - - - - - - 0.724 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
27. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1.482 - 0.704 0.778 - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
28. CR376785.2 CR376785.2 175 1.466 - - - - 0.736 - 0.730 - -
29. nfixa ENSDARG00000043226 14 1.449 - 0.704 - - - - - - 0.745 nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
30. gtf3c6 ENSDARG00000043301 97 1.438 - 0.733 - - - - 0.705 - - general transcription factor IIIC, polypeptide 6, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1009]
31. lingo1b ENSDARG00000035899 86 1.431 - 0.704 - - - - - - 0.727 leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
32. mthfd2l ENSDARG00000054199 25 1.414 - 0.704 0.710 - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
33. slc17a6a ENSDARG00000001127 337 1.413 - 0.704 - - - - - - 0.709 solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
34. ME1 ENSDARG00000053215 8 1 - - - - - - 1.000 - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
35. nts ENSDARG00000057887 5 1 - - - - - - 1.000 - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
36. CU855895.3 CU855895.3 21 1 - 1.000 - - - - - - -
37. dctn1b ENSDARG00000056753 6 1 - 1.000 - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
38. syngr2b_1 ENSDARG00000104470 24 1 - - - - - - 1.000 - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
39. PLA2R1 ENSDARG00000077474 45 1 - - - - - - 1.000 - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
40. sec22bb ENSDARG00000100435 33 1 - - - - - - 1.000 - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
41. zgc:92590 ENSDARG00000040282 13 1 - - - - - - 1.000 - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
42. si:dkey-264b2.3 19 1 - - - - - - 1.000 - - si:dkey-264b2.3, transcript variant X2
43. ONECUT2 ENSDARG00000090387 8 1 - - - - - - 1.000 - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
44. RNase_MRP RNase_MRP 118 1 - 1.000 - - - - - - -
45. akt3a ENSDARG00000104810 21 1 - - - - - - 1.000 - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
46. si:ch73-138e16.2 ENSDARG00000104894 1 1 - - - - - - 1.000 - - si:ch73-138e16.2 [Source:ZFIN;Acc:ZDB-GENE-070705-201]
47. zgc:173709 86 1 - 1.000 - - - - - - - zgc:173709
48. CABZ01069022.1 ENSDARG00000105692 16 1 - - - - - - 1.000 - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
49. BX511270.1 BX511270.1 25 1 - - - - - - 1.000 - -
50. CABZ01078314.1 CABZ01078314.1 44 1 - - - - - - 1.000 - -
51. secisbp2 ENSDARG00000073892 79 1 - 1.000 - - - - - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
52. slc5a5 ENSDARG00000005392 6 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
53. si:dkey-4c15.12 ENSDARG00000095350 119 1 - - - - - - 1.000 - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
54. si:dkey-216e24.4 si:dkey-216e24.4 14 1 - - - - - - 1.000 - -
55. CABZ01086801.1 CABZ01086801.1 41 1 - 1.000 - - - - - - -
56. KCNN2 ENSDARG00000014939 25 1 - - - - - - 1.000 - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
57. sfxn5a ENSDARG00000103595 11 1 - - - - - - 1.000 - - sideroflexin 5a [Source:ZFIN;Acc:ZDB-GENE-090312-174]
58. figf 48 1 - - - - - - 1.000 - - c-fos induced growth factor, transcript variant X2
59. FAM83F FAM83F 8 1 - - - - - - 1.000 - -
60. mapk9 ENSDARG00000077364 38 1 - - - - - - 1.000 - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
61. ela3l ENSDARG00000007276 11 1 - - - - - - 1.000 - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
62. XKR7 ENSDARG00000026333 175 1 - - - - - - - 1.000 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
63. CABZ01071446.1 CABZ01071446.1 4 1 - - - - - - 1.000 - -
64. si:dkey-286j17.4 ENSDARG00000093402 1 1 - 1.000 - - - - - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
65. ptprja ENSDARG00000033042 25 1 - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
66. VSTM2A ENSDARG00000021909 0 1 - - - - - - 1.000 - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
67. cacna2d2 cacna2d2 16 1 - - - - - - 1.000 - -
68. si:rp71-20i5.5 si:rp71-20i5.5 9 1 - - - - - - 1.000 - -
69. CABZ01113374.2 CABZ01113374.2 27 1 - - - - - - 1.000 - -
70. PAMR1 ENSDARG00000093480 40 1 - - - - - - 1.000 - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
71. si:dkey-114c15.5 ENSDARG00000095150 70 1 - 1.000 - - - - - - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
72. LRFN2_1 LRFN2_1 17 1 - - - - - - 1.000 - -
73. si:dkey-241l7.10 si:dkey-241l7.10 38 1 - - - - - - 1.000 - -
74. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - 1.000 - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
75. slc26a6 ENSDARG00000055835, ENSDARG00000097292 66 1 - - - - - - 1.000 - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
76. si:dkey-103e21.5 ENSDARG00000091926, ENSDARG00000110300 12 1 - - - - - - 1.000 - - si:dkey-103e21.5 [Source:ZFIN;Acc:ZDB-GENE-060526-186]
77. CABZ01088927.1 CABZ01088927.1 0 1 - - - - - - 1.000 - -
78. DLG4 3 1 - - - - - - 1.000 - - discs large MAGUK scaffold protein 4, transcript variant X5
79. CCHCR1_1 CCHCR1_1 1 1 - - - - - - 1.000 - -
80. CDH7 16 1 - 1.000 - - - - - - - cadherin 7, type 2, transcript variant X1
81. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1 - - - - - - 1.000 - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
82. tbx6 ENSDARG00000011785 132 1 - - - - - - 1.000 - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
83. si:dkey-199m13.2 si:dkey-199m13.2 31 1 - - - - - - 1.000 - -
84. il12a ENSDARG00000038878 3 1 - - - - - - 1.000 - - interleukin 12a [Source:ZFIN;Acc:ZDB-GENE-060724-1]
85. znrf2b ENSDARG00000098792 0 1 - - - - - - 1.000 - - zinc and ring finger 2b [Source:ZFIN;Acc:ZDB-GENE-060929-24]
86. SGCZ ENSDARG00000106258 2 1 - - - - - - 1.000 - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
87. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - - - 1.000 - -
88. C17orf105 C17orf105 1 1 - - - - - - 1.000 - -
89. CT573256.1 ENSDARG00000091657 18 1 - - - - - - 1.000 - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
90. snrnp35 ENSDARG00000099913 21 1 - 1.000 - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
91. zglp1 ENSDARG00000067669 6 1 - - - - - - 1.000 - - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
92. MFAP4 ENSDARG00000090783 8 1 - - - - - - 1.000 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
93. C2CD5 ENSDARG00000094590 1 1 - 1.000 - - - - - - - C2 calcium-dependent domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-041114-193]
94. pak1 ENSDARG00000103959 32 1 - - - - - - 1.000 - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
95. si:ch211-184m19.3 si:ch211-184m19.3 46 1 - 1.000 - - - - - - -
96. si:ch211-190g11.1 si:ch211-190g11.1 0 1 - - - - - - 1.000 - -
97. aff4 ENSDARG00000001857 134 1 - - - - - - 1.000 - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
98. pdcl ENSDARG00000009480 12 1 - - - - - - 1.000 - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
99. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - - - 1.000 - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
100. PDE4B PDE4B 13 1 - - - - - - 1.000 - -

There are 1260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA