Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chd4b

Gene Name Gene ID Reads Annotation
chd4b ENSDARG00000025789 14299 chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]










Genes with expression patterns similar to chd4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chd4b ENSDARG00000025789 14299 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
2. epha4b ENSDARG00000011600 3110 3.052 0.709 0.707 0.749 - 0.887 - - - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
3. nmt1a ENSDARG00000052966 5918 2.697 - 0.889 - - 0.924 - 0.884 - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
4. tceb1b 14935 2.562 - - - 0.986 0.831 0.745 - - - transcription elongation factor B (SIII), polypeptide 1b
5. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.455 0.706 0.849 - - 0.900 - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
6. cdkn2aipnl ENSDARG00000053395 5107 2.419 0.706 0.829 - - - - 0.884 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
7. ap2m1a ENSDARG00000002790 9781 2.397 - 0.787 - - - 0.756 0.854 - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
8. ppm1g ENSDARG00000075559 6516 2.396 0.703 0.787 - - - - 0.906 - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
9. SERBP1 SERBP1 9276 2.363 - 0.744 - 0.895 0.724 - - - -
10. marcksl1b ENSDARG00000035715 37390 2.361 0.782 - 0.783 - 0.796 - - - - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
11. tomm5 ENSDARG00000068265 11813 2.358 0.754 - - 0.885 - - 0.719 - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
12. lpp ENSDARG00000023578 3581 2.307 - 0.795 - - - 0.776 0.736 - - LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
13. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 2.298 - 0.739 - - - 0.787 - 0.772 - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
14. ube2e1 ENSDARG00000116649 10656 2.296 - 0.743 - - - - 0.788 0.765 - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
15. ndufb7 ENSDARG00000033789 5898 2.276 - 0.723 - - - 0.764 0.789 - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
16. nova2 ENSDARG00000017673 7685 2.261 0.734 - 0.771 - - - - 0.756 - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
17. anp32e ENSDARG00000054804 11017 2.254 0.767 0.761 - - - - - - 0.726 acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
18. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.196 0.704 - - - 0.767 - - - 0.725 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
19. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.847 - 0.918 - - 0.929 - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
20. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.794 - - - 0.894 0.900 - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
21. ckap5 ENSDARG00000102674 5068 1.779 - - - - 0.928 - 0.851 - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
22. eif2s3 ENSDARG00000008292 17051 1.768 - 0.896 - 0.872 - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
23. serbp1a ENSDARG00000074242 10818 1.757 - - - 0.898 - - 0.859 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
24. wu:fc51f04 wu:fc51f04 7074 1.754 - - 0.834 - - - 0.920 - -
25. ipo4 ENSDARG00000041493 1578 1.743 - 0.827 - - 0.916 - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
26. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.737 0.779 - - - - - 0.958 - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
27. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.736 - 0.828 - - 0.908 - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
28. ubr2 ENSDARG00000070164 3960 1.732 - - - - 0.901 - 0.831 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
29. cnih cnih 8292 1.729 - 0.812 - - - - 0.917 - -
30. tcp1 ENSDARG00000017891 7946 1.726 - - - - 0.847 - 0.879 - - t-complex 1 [Source:ZFIN;Acc:ZDB-GENE-990714-24]
31. cdc42 ENSDARG00000044573 11795 1.722 - - - - 0.909 - 0.813 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
32. actr1 ENSDARG00000011611 3879 1.719 - 0.832 - - 0.887 - - - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
33. CU929431.1 CU929431.1 2234 1.707 - - - 0.901 - - 0.806 - -
34. C3H19orf43 C3H19orf43 2961 1.702 - 0.802 - 0.900 - - - - -
35. minos1 ENSDARG00000101619 5273 1.702 - 0.818 - - 0.884 - - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
36. srm ENSDARG00000055760 6572 1.698 - - - - 0.905 - 0.793 - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
37. irf2bp2a ENSDARG00000004702 6719 1.694 - 0.814 - - 0.880 - - - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
38. calm2b 3890 1.691 - - - - - 0.781 0.910 - - calmodulin 2b, (phosphorylase kinase, delta)
39. dag1 ENSDARG00000016153 10886 1.69 - 0.812 - - 0.878 - - - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
40. lama4 ENSDARG00000020785 1522 1.686 - 0.770 - - 0.916 - - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
41. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.684 0.761 - - - 0.923 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
42. rbm25 rbm25 3629 1.68 - 0.747 - - 0.933 - - - -
43. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.68 0.737 - - - - - 0.943 - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
44. snrpf ENSDARG00000105037 10241 1.675 0.818 0.857 - - - - - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
45. eif3c ENSDARG00000016443 18003 1.672 - - - - 0.920 0.752 - - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
46. Mar-07 Mar-07 2926 1.661 - 0.857 - - - - 0.804 - -
47. alas1 ENSDARG00000021059 4892 1.659 - 0.761 - 0.898 - - - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
48. idh3g ENSDARG00000023648 4877 1.659 - - - 0.896 - - 0.763 - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
49. hn1b hn1b 7325 1.654 0.833 0.821 - - - - - - -
50. hadhb ENSDARG00000102055 9700 1.65 - 0.817 - - 0.833 - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
51. midn ENSDARG00000018524 7559 1.641 - 0.852 0.789 - - - - - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
52. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.64 0.745 0.895 - - - - - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
53. cdk5 ENSDARG00000056683 1998 1.638 - 0.719 - - 0.919 - - - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
54. ck2a1 ck2a1 3749 1.638 - 0.718 - - 0.920 - - - -
55. socs5a ENSDARG00000100717 6927 1.637 - 0.790 - - - - 0.847 - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
56. tox ENSDARG00000032317 9126 1.635 0.734 - - 0.901 - - - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
57. aass ENSDARG00000051816 3795 1.635 0.777 - - - - - 0.858 - - aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
58. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 1.633 - 0.717 - - 0.916 - - - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
59. esd ENSDARG00000019496 3192 1.631 - 0.719 - - 0.912 - - - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
60. eftud2 ENSDARG00000012261 3081 1.63 - 0.789 - - - - 0.841 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
61. AMBRA1_1 AMBRA1_1 2179 1.628 - 0.727 - 0.901 - - - - -
62. pes ENSDARG00000018902 3286 1.628 - 0.834 - - - - 0.794 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
63. snrnp70 ENSDARG00000077126 5921 1.626 - 0.782 - - - - 0.844 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
64. rpl7a ENSDARG00000019230 1204 1.626 - 0.803 - - - - 0.823 - - ribosomal protein L7a [Source:ZFIN;Acc:ZDB-GENE-031001-9]
65. herpud2 ENSDARG00000021033 1800 1.622 - 0.723 - 0.899 - - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
66. drap1 ENSDARG00000041203 6749 1.62 - 0.725 - - - - 0.895 - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
67. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.62 - 0.732 - - 0.888 - - - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
68. ndufa6 ENSDARG00000038028 2653 1.619 - 0.761 - - - - 0.858 - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
69. hmgb1b ENSDARG00000030479 10398 1.618 0.729 - - 0.889 - - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
70. pcmt ENSDARG00000015201 5132 1.618 - 0.728 - 0.890 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
71. tuba1c ENSDARG00000055216 8384 1.616 0.721 - - 0.895 - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
72. fzr1 fzr1 2984 1.614 - 0.780 - - - - 0.834 - -
73. cul4b ENSDARG00000060510 6053 1.613 - - 0.717 0.896 - - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
74. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.603 - - 0.763 - 0.840 - - - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
75. pomp ENSDARG00000032296 4439 1.603 0.772 0.831 - - - - - - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
76. smc1al ENSDARG00000058203 8838 1.603 - - - 0.896 - - - - 0.707 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
77. rbm4.3 ENSDARG00000022129 28571 1.602 - - - 0.831 0.771 - - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
78. mrpl12 ENSDARG00000038768 5539 1.601 - 0.763 - - - - 0.838 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
79. si:ch211-51e12.7 ENSDARG00000045914 9598 1.6 0.723 - - - - - - 0.877 - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
80. sars ENSDARG00000008237 3330 1.6 0.769 0.831 - - - - - - - seryl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040831-1]
81. wdr82 ENSDARG00000014083 3159 1.598 - 0.758 - - - - 0.840 - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
82. ANKRD11 ENSDARG00000051886 10024 1.592 - 0.754 - - - - - - 0.838 ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
83. rnaseka ENSDARG00000069461 10304 1.59 - - - - 0.826 0.764 - - - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
84. uhrf1 ENSDARG00000103409 3282 1.579 0.738 - - - - - 0.841 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
85. auts2 auts2 1538 1.574 - 0.744 - - - - 0.830 - -
86. ppp1cb ENSDARG00000044153 4748 1.573 - 0.737 - - - - 0.836 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
87. psma3 ENSDARG00000086618 6200 1.572 0.712 - - - - - 0.860 - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
88. ctnnb1 ENSDARG00000014571 12004 1.571 - 0.780 - - 0.791 - - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
89. h2afvb ENSDARG00000116491 35692 1.569 0.706 0.863 - - - - - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
90. dnaja2 ENSDARG00000104066 11946 1.566 - 0.822 - - 0.744 - - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
91. snrpd1 ENSDARG00000011648 8615 1.563 - 0.709 - - - - 0.854 - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
92. mrpl27 ENSDARG00000032985 2158 1.563 - 0.723 - - - - 0.840 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
93. sae1 ENSDARG00000010487 2028 1.562 0.827 0.735 - - - - - - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
94. mrps35 ENSDARG00000038456 1514 1.56 0.732 0.828 - - - - - - - mitochondrial ribosomal protein S35 [Source:ZFIN;Acc:ZDB-GENE-050809-131]
95. brd3b ENSDARG00000100129 6387 1.56 - 0.841 - - - - - - 0.719 bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
96. kmt2cb ENSDARG00000075560 4816 1.56 - 0.783 - - 0.777 - - - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
97. eif3m ENSDARG00000013931 8117 1.555 0.706 0.849 - - - - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
98. si:dkey-82i20.5 ENSDARG00000116717 2965 1.555 - 0.724 - - - - 0.831 - - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
99. sdc4 ENSDARG00000059906 10105 1.554 - 0.817 - - - 0.737 - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
100. mcm5 ENSDARG00000019507 6407 1.552 - 0.779 - - 0.773 - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]

There are 1490 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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