Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chd4a

Gene Name Gene ID Reads Annotation
chd4a ENSDARG00000063535, ENSDARG00000111791 4059 chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]










Genes with expression patterns similar to chd4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
2. pou2f1b ENSDARG00000007996 2172 3.997 - 0.769 - 0.704 0.993 0.824 0.707 - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
3. clstn1 ENSDARG00000031720 5286 3.994 - - - 0.703 0.930 0.830 0.825 0.706 - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
4. elavl3 ENSDARG00000014420 8644 3.382 - - 0.965 - 0.759 0.848 0.810 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
5. kidins220b ENSDARG00000017338 1937 3.359 - - - - 0.989 0.729 - 0.859 0.782 kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
6. tmeff1b ENSDARG00000056740 11253 3.281 - - - - 0.818 0.752 0.871 0.840 - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
7. fabp7a ENSDARG00000007697 5211 3.06 - - - 0.756 - 0.771 - 0.803 0.730 fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
8. uba1 ENSDARG00000037559 11579 3.012 - 0.745 - 0.771 - 0.712 0.784 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
9. cdkn1c cdkn1c 17427 2.998 - - 0.787 - 0.709 - 0.785 - 0.717
10. dbx2 2971 2.626 - - - - 0.988 0.776 0.862 - - developing brain homeobox 2
11. zgc:174906 ENSDARG00000075314 2187 2.604 - - - 0.771 - - 0.902 0.931 - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
12. chd7 ENSDARG00000075211 12085 2.568 - - - 0.838 - 0.811 0.919 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
13. ddx19 ENSDARG00000005699 4602 2.552 0.885 - - - 0.893 - 0.774 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
14. trim36 ENSDARG00000062794 785 2.549 - - 0.967 - - 0.784 0.798 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
15. ssbp4 ENSDARG00000056483 10196 2.548 - - - 0.832 - 0.851 0.865 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
16. FP016176.1 FP016176.1 7030 2.533 - - - - 0.885 0.784 0.864 - -
17. CYTH2 ENSDARG00000028800 2349 2.524 - - - 0.822 - - 0.802 0.900 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
18. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.522 - - - - 0.965 0.708 0.849 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
19. lppr3a lppr3a 1294 2.52 - - - - 0.991 0.718 0.811 - -
20. schip1 ENSDARG00000035175 3838 2.498 - - 0.952 - - 0.735 - 0.811 - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
21. g3bp1 ENSDARG00000017741 7622 2.495 - - 0.881 - - - 0.753 0.861 - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
22. nova1 ENSDARG00000020178 4129 2.487 - - - 0.734 - - 0.866 - 0.887 neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
23. nrarpb ENSDARG00000018958 6225 2.483 - - 0.911 0.736 - - 0.836 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
24. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.48 - - - 0.851 - 0.756 0.873 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
25. top2b ENSDARG00000034195 3715 2.473 - - - 0.729 - - 0.823 - 0.921 DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
26. cadpsb ENSDARG00000070567 458 2.465 - - - - - 0.800 0.860 0.805 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
27. hnrpl 6412 2.465 - - - - 0.858 0.858 0.749 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
28. h2afva ENSDARG00000068820 16427 2.459 - - - - 0.848 0.851 0.760 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
29. thoc2 ENSDARG00000037503 8711 2.457 - - 0.983 - 0.761 - 0.713 - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
30. CBFA2T3 ENSDARG00000079012 6799 2.448 - - - - - 0.805 0.853 0.790 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
31. kifc1 ENSDARG00000001558 6658 2.444 - - - - 0.964 0.766 0.714 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
32. siah1 ENSDARG00000030871 1590 2.443 - 0.747 - - - - 0.846 0.850 - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
33. TNRC6C_2 TNRC6C_2 2444 2.439 - - - - - 0.745 0.781 0.913 -
34. pou3f3a ENSDARG00000042032 2835 2.437 - - - - 0.749 0.827 0.861 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
35. rbm4.1 ENSDARG00000036386 625 2.427 - - - 0.815 - 0.757 - 0.855 - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
36. plekhh1 ENSDARG00000053835 2123 2.427 0.702 - 0.965 - - - - 0.760 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
37. arid2 ENSDARG00000007413 4413 2.403 - - - 0.739 - - 0.757 0.907 - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
38. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 2.403 - 0.873 - - - - 0.704 - 0.826 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
39. znf292b ENSDARG00000043973 3791 2.397 - - - 0.754 - - 0.776 0.867 - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
40. ckbb ENSDARG00000043257 3503 2.397 - - - - - 0.723 0.875 - 0.799 creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
41. smarca4 smarca4 9726 2.392 - - - 0.812 - 0.844 0.736 - -
42. tmpob ENSDARG00000022978 8121 2.392 - - - - - - 0.860 0.825 0.707 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
43. atp6v0a1b ENSDARG00000015174 1052 2.388 - - - - - 0.728 0.772 0.888 - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
44. ddx39ab ENSDARG00000015111 11619 2.377 - - - - - 0.749 0.821 0.807 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
45. ppm1g ENSDARG00000075559 6516 2.369 - - - 0.711 0.952 0.706 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
46. nbeaa ENSDARG00000070080 862 2.364 - - - 0.804 - - 0.848 - 0.712 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
47. lrrtm1 ENSDARG00000052713 1041 2.364 - - - - - 0.730 0.828 0.806 - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
48. epb41a ENSDARG00000099283 860 2.355 - - - 0.761 - 0.829 0.765 - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
49. pcdh19 ENSDARG00000034344 2378 2.354 - - - 0.819 - 0.795 0.740 - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
50. znf865 ENSDARG00000036698 15532 2.352 - - - 0.791 - - 0.849 - 0.712 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
51. nova2 ENSDARG00000017673 7685 2.344 - - - 0.755 - 0.756 0.833 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
52. tmem35 ENSDARG00000052567 5685 2.341 - - - - - 0.797 0.816 - 0.728 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
53. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.34 - - - - 0.860 0.771 - - 0.709 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
54. khsrp ENSDARG00000026489 15738 2.339 - - - - - - 0.766 0.771 0.802 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
55. AL844567.1 AL844567.1 1605 2.333 - 0.807 - 0.751 - 0.775 - - -
56. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.33 - - - 0.737 - 0.750 0.843 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
57. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.33 - - - 0.745 - 0.745 0.840 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
58. igdcc3 ENSDARG00000075158 1921 2.326 - - - 0.733 - 0.883 0.710 - - immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
59. tgif1 ENSDARG00000059337 4020 2.32 - - - 0.705 - - 0.787 0.828 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
60. pou3f2a ENSDARG00000070220 817 2.318 - - - 0.799 - 0.740 0.779 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
61. onecutl ENSDARG00000040253 2143 2.318 - - - - - 0.700 0.773 0.845 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
62. SCML2 ENSDARG00000012949 1310 2.314 - - - 0.737 - - - 0.853 0.724 Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
63. hnrnpub ENSDARG00000004735 16496 2.309 - - 0.709 - - - 0.882 - 0.718 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
64. tox ENSDARG00000032317 9126 2.3 - - - - - - 0.841 0.748 0.711 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
65. srrm1 ENSDARG00000001244 4972 2.299 - - - 0.717 0.836 - - 0.746 - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
66. zgc:158409 zgc:158409 21963 2.297 - 0.777 0.709 - - - - 0.811 -
67. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.286 - - - 0.731 - - 0.832 - 0.723 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
68. tmem198a ENSDARG00000042115 1694 2.281 - - - 0.790 - 0.734 0.757 - - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
69. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 2.278 - 0.720 - - - 0.710 - 0.848 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
70. psmb6 ENSDARG00000002240 8015 2.277 0.702 0.736 - - - - - 0.839 - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
71. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 2.277 - - - 0.702 - 0.807 0.768 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
72. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 2.264 0.703 - - - 0.738 - 0.823 - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
73. vdac1 ENSDARG00000045132 8051 2.238 - 0.789 - - - 0.715 0.734 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
74. nop56 ENSDARG00000012820 15231 2.236 - - - - 0.705 - - 0.751 0.780 NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
75. rtca ENSDARG00000002215 3558 2.225 - - - - - 0.751 0.771 - 0.703 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
76. kif22 ENSDARG00000102624 3694 2.212 0.745 - - - - 0.762 0.705 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
77. uchl1 ENSDARG00000026871 1578 2.192 - 0.736 - - - 0.714 0.742 - - ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-030131-3844]
78. sumo3b ENSDARG00000035993 3414 2.181 - 0.730 - - - - 0.714 0.737 - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
79. lgi1a ENSDARG00000020493 1218 2.155 - - - 0.740 - 0.711 0.704 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
80. POLE4 ENSDARG00000013016 848 2.151 - - - 0.704 - 0.713 0.734 - - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
81. psma3 ENSDARG00000086618 6200 1.924 - - 0.956 - 0.968 - - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
82. PHLDB1 PHLDB1 3821 1.912 - - 0.942 - 0.970 - - - -
83. UBE2QL1 ENSDARG00000079276 3474 1.828 - - 0.981 - - - 0.847 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
84. bysl ENSDARG00000001057 2621 1.825 - - 0.840 - 0.985 - - - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
85. skib ENSDARG00000008034 6518 1.816 - - 0.969 - - - 0.847 - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
86. MAPRE2 ENSDARG00000099943 3041 1.811 - - - - 0.990 - 0.821 - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
87. C7H4orf48 C7H4orf48 1455 1.81 - - - - 0.989 - 0.821 - -
88. ACVR2B 6615 1.787 - - 0.911 - 0.876 - - - - activin A receptor, type IIB
89. plp1a ENSDARG00000103732 3544 1.776 - - - - 0.952 - 0.824 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
90. scocb ENSDARG00000002217 1844 1.773 - - - - 0.991 - 0.782 - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
91. anapc10 ENSDARG00000090152 1406 1.77 - - - - 0.988 - 0.782 - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
92. PSIP1 PSIP1 5252 1.762 - - - - 0.960 - 0.802 - -
93. brms1la ENSDARG00000006235 2011 1.746 - - 0.975 - - - 0.771 - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
94. cdc26 ENSDARG00000077815, ENSDARG00000115575 1460 1.746 - - - - 0.988 - 0.758 - - cell division cycle 26 homolog [Source:ZFIN;Acc:ZDB-GENE-040822-18]
95. usp44 ENSDARG00000089861 1532 1.739 - - 0.970 - - - 0.769 - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
96. gorasp2 ENSDARG00000015126 3923 1.738 - 0.753 - - 0.985 - - - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
97. ftsjd2 ftsjd2 2694 1.73 - 0.739 - - 0.991 - - - -
98. sp3b ENSDARG00000007812 2928 1.724 - - 0.976 - - 0.748 - - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
99. atf7ip ENSDARG00000069619 5495 1.719 - - 0.897 - - - 0.822 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
100. insm1b ENSDARG00000053301 2032 1.712 - - - - - 0.809 - 0.903 - insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]

There are 2422 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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