Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chd3

Gene Name Gene ID Reads Annotation
chd3 ENSDARG00000021405, ENSDARG00000115235 17 chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]










Genes with expression patterns similar to chd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chd3 ENSDARG00000021405, ENSDARG00000115235 17 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
2. oprd1b ENSDARG00000037159 21 2.426 - 0.894 - 0.805 - - - - 0.727 opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
3. BX005106.1 BX005106.1 22 2 1.000 - - - 1.000 - - - -
4. si:dkey-109m8.1 si:dkey-109m8.1 2 2 - - - 1.000 1.000 - - - -
5. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1.928 1.000 - 0.928 - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
6. si:dkey-199m13.3 si:dkey-199m13.3 2 1.894 - 0.894 1.000 - - - - - -
7. si:ch211-274k16.4 si:ch211-274k16.4 6 1.894 1.000 0.894 - - - - - - -
8. zgc:113142 ENSDARG00000038969 74 1.854 1.000 - - - - 0.854 - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
9. CCSER1 ENSDARG00000075919 16 1.82 0.820 - 1.000 - - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
10. si:ch211-224b1.4 si:ch211-224b1.4 29 1.811 0.917 0.894 - - - - - - -
11. htr5al htr5al 6 1.798 - 0.894 - - 0.904 - - - -
12. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1.796 1.000 0.796 - - - - - - -
13. BX664622.3 BX664622.3 42 1.787 0.893 0.894 - - - - - - -
14. si:ch211-264e16.2 ENSDARG00000094415 4 1.773 - - 1.000 - - - 0.773 - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
15. si:dkeyp-46h3.2 ENSDARG00000092498 23 1.757 - - 0.984 - - - 0.773 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
16. WDR63 ENSDARG00000105093 13 1.756 - - 1.000 - - - - - 0.756 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
17. twist1b ENSDARG00000076010 88 1.751 0.805 0.946 - - - - - - - twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]
18. sebox ENSDARG00000042526 2 1.721 - - - - 1.000 - 0.721 - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
19. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1.703 - 0.894 0.809 - - - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
20. KBTBD3 ENSDARG00000060512 42 1.7 0.806 0.894 - - - - - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
21. cx32.2 ENSDARG00000076789 23 1.685 - - 0.828 - 0.857 - - - - connexin 32.2 [Source:ZFIN;Acc:ZDB-GENE-050303-1]
22. pxmp2 ENSDARG00000003144 50 1.667 - 0.894 - - - - 0.773 - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
23. opn4.1 ENSDARG00000007553 66 1.661 0.798 - 0.863 - - - - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
24. si:dkey-208a9.1 si:dkey-208a9.1 3 1.65 - 0.894 - - - - - - 0.756
25. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1.62 0.893 - - - - - 0.727 - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
26. TDRD7B ENSDARG00000077523 124 1.597 0.790 0.807 - - - - - - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
27. si:zfos-364h11.1 99 1.548 - 0.828 - 0.720 - - - - - si:zfos-364h11.1, transcript variant X4
28. TECPR1 TECPR1 173 1.538 0.805 - - - - - 0.733 - -
29. fxyd6 ENSDARG00000100971 51 1.528 - 0.743 - - - - - 0.785 - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
30. nitr3a ENSDARG00000110676 13 1.528 - - - 0.825 - - - 0.703 - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
31. si:ch73-95a24.1 si:ch73-95a24.1 11 1.518 - - 0.762 - 0.756 - - - -
32. ptrfb ptrfb 567 1.518 0.803 - - - - - 0.715 - -
33. epsti1 ENSDARG00000094578 33 1.499 - 0.726 - - - - 0.773 - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
34. zgc:91999 ENSDARG00000105001 129 1.485 0.780 - - - - - 0.705 - - zgc:91999 [Source:ZFIN;Acc:ZDB-GENE-040801-241]
35. efna3a ENSDARG00000014675 68 1.476 0.717 - - - 0.759 - - - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
36. znf395 znf395 60 1.463 0.724 0.739 - - - - - - -
37. ROCK2_3 ROCK2_3 12 1.452 - - 0.724 - - 0.728 - - -
38. RTKN_1 RTKN_1 176 1.425 - - - - - 0.723 0.702 - -
39. si:dkeyp-110e4.11 ENSDARG00000071585 148 1.413 - 0.707 - - - - 0.706 - - si:dkeyp-110e4.11 [Source:ZFIN;Acc:ZDB-GENE-070424-267]
40. CU463790.1 CU463790.1 60 1 1.000 - - - - - - - -
41. si:dkey-20i20.10 ENSDARG00000095455 3 1 - - - - 1.000 - - - - si:dkey-20i20.10 [Source:ZFIN;Acc:ZDB-GENE-060503-905]
42. FAT1 FAT1 689 1 1.000 - - - - - - - -
43. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
44. doc2d ENSDARG00000079962 76 1 1.000 - - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
45. si:dkey-187i8.2 ENSDARG00000096624 8 1 1.000 - - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
46. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - 1.000 - - - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
47. U1 U1 0 1 - - - - 1.000 - - - -
48. HTRA2_4 HTRA2_4 1 1 - - 1.000 - - - - - -
49. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
50. CTXN1 ENSDARG00000098284, ENSDARG00000113270 2 1 - - 1.000 - - - - - - cortexin 1 [Source:NCBI gene;Acc:101885932]
51. si:ch211-203b20.7 ENSDARG00000053036, ENSDARG00000113237 0 1 - - - - 1.000 - - - - si:ch211-203b20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-302]
52. cacng8a ENSDARG00000020450 32 1 - - 1.000 - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
53. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - 1.000 - - - - - -
54. eef1a2 ENSDARG00000006838, ENSDARG00000111569 2 1 - - - - 1.000 - - - - eukaryotic translation elongation factor 1 alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040718-64]
55. si:ch73-91k6.6 si:ch73-91k6.6 1 1 - - - 1.000 - - - - -
56. si:ch211-24n20.3 si:ch211-24n20.3 0 1 - - - - 1.000 - - - -
57. si:dkey-15f23.2 si:dkey-15f23.2 2 1 - - - - 1.000 - - - -
58. abca4a ENSDARG00000057169 27 1 1.000 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
59. EPM2AIP1 EPM2AIP1 4 1 - - 1.000 - - - - - -
60. fgl2 fgl2 9 1 - - - - 1.000 - - - -
61. zgc:123060 4 1 - - 1.000 - - - - - - zgc:123060
62. GGT5 GGT5 1 1 - - - - 1.000 - - - -
63. U1_36 U1_36 0 1 - - - - 1.000 - - - -
64. mvb12ba ENSDARG00000091619 18 1 - - - - 1.000 - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
65. BX927362.1 ENSDARG00000097469 13 1 - - 1.000 - - - - - -
66. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
67. irbp 2 1 - - 1.000 - - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
68. si:dkey-25i10.3 si:dkey-25i10.3 5 1 - - - - 1.000 - - - -
69. CABZ01030429.1 CABZ01030429.1 1 1 1.000 - - - - - - - -
70. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 1.000 - - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
71. CABZ01080134.1 CABZ01080134.1 2 1 - - - - 1.000 - - - -
72. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - 1.000 - - - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
73. GRAMD3 GRAMD3 4 1 - - 1.000 - - - - - -
74. lgals9l1 ENSDARG00000025903 58 1 - - 1.000 - - - - - - lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9543]
75. si:dkey-113d16.4 si:dkey-113d16.4 1 1 - - 1.000 - - - - - -
76. CNTD1 2 1 - - - - 1.000 - - - - cyclin N-terminal domain containing 1
77. cd4 cd4 4 1 - - 1.000 - - - - - -
78. BX547934.1 ENSDARG00000097061 35 1 1.000 - - - - - - - -
79. CABZ01075242.1 ENSDARG00000114227 9 1 - - - - 1.000 - - - -
80. dazl ENSDARG00000036214 11 1 - - 1.000 - - - - - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
81. v2rc2 ENSDARG00000055952 1 1 - - 1.000 - - - - - - vomeronasal 2 receptor, c2 [Source:ZFIN;Acc:ZDB-GENE-050419-39]
82. CU896691.3 ENSDARG00000109630 1 1 1.000 - - - - - - - -
83. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
84. CR391991.2 ENSDARG00000103510 0 1 - - - - 1.000 - - - -
85. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - 1.000 - - - - - -
86. CU695006.1 CU695006.1 4 1 - - 1.000 - - - - - -
87. cel.1 ENSDARG00000017490 4 1 - - - - 1.000 - - - - carboxyl ester lipase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1201]
88. GPRIN1 10 1 - - - - 1.000 - - - - G protein regulated inducer of neurite outgrowth 1
89. si:ch211-57m13.1 ENSDARG00000095927 1 1 - - - - 1.000 - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
90. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - 1.000 - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
91. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
92. si:ch211-114l13.3 ENSDARG00000094346 2 1 1.000 - - - - - - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
93. hepacam 73 1 1.000 - - - - - - - - hepatic and glial cell adhesion molecule, transcript variant X2
94. map3k9 ENSDARG00000013491 1 1 - - - - 1.000 - - - - mitogen-activated protein kinase kinase kinase 9 [Source:ZFIN;Acc:ZDB-GENE-081113-5]
95. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
96. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
97. gbp3 ENSDARG00000003244 90 1 1.000 - - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
98. irf1a ENSDARG00000043492 5 1 - - 1.000 - - - - - - interferon regulatory factor 1a [Source:ZFIN;Acc:ZDB-GENE-060421-4031]
99. SMARCAD1 SMARCAD1 104 1 1.000 - - - - - - - -
100. si:dkey-61p9.7 ENSDARG00000068865 3 1 - - 1.000 - - - - - - si:dkey-61p9.7 [Source:ZFIN;Acc:ZDB-GENE-041210-241]

There are 1013 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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