Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chd2

Gene Name Gene ID Reads Annotation
chd2 ENSDARG00000060687 3832 chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]










Genes with expression patterns similar to chd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chd2 ENSDARG00000060687 3832 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
2. calr ENSDARG00000076290 13987 2.428 0.840 - - - 0.858 0.730 - - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
3. tmed1b ENSDARG00000017255 2238 2.426 0.948 0.739 - - - 0.739 - - - transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]
4. sparc ENSDARG00000019353 38281 2.367 0.961 - - - 0.702 - 0.704 - - secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
5. aclya ENSDARG00000099079 2324 1.962 0.966 - - - 0.996 - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
6. mat2b ENSDARG00000012932 3146 1.947 0.959 - - - 0.988 - - - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
7. psmd6 ENSDARG00000070674 4675 1.944 0.946 - - - - - 0.998 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
8. hoxb3a ENSDARG00000029263 5493 1.901 0.943 - - - 0.958 - - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
9. cers5 ENSDARG00000002365 2540 1.879 0.885 - - - 0.994 - - - - ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
10. slc16a12b ENSDARG00000089885 3744 1.872 - 0.873 - - - - 0.999 - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
11. SERP1_1 ENSDARG00000076223 6668 1.792 0.834 - - - 0.958 - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
12. sh3gl3a ENSDARG00000013360 3602 1.791 - 0.791 - - - - 1.000 - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
13. gars ENSDARG00000059070 17015 1.775 0.882 - - - 0.893 - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
14. CABZ01111496.1 ENSDARG00000003041 15566 1.774 0.828 - - - 0.946 - - - - E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
15. cltcb ENSDARG00000090716 5544 1.765 0.957 0.808 - - - - - - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
16. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 1.76 - 0.760 - - - - 1.000 - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
17. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.757 0.967 - - 0.790 - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
18. amfr 774 1.752 0.978 0.774 - - - - - - - autocrine motility factor receptor, E3 ubiquitin protein ligase a, transcript variant X1
19. cant1a ENSDARG00000012192 1324 1.746 0.955 - - 0.791 - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
20. qkia ENSDARG00000097478 18572 1.743 - - - - - 0.749 0.994 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
21. rhot1a ENSDARG00000099996 2059 1.737 - 0.742 - - 0.995 - - - - ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
22. cand1 ENSDARG00000017841 8164 1.735 - - - - 0.987 0.748 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
23. ercc4 ENSDARG00000014161 2167 1.722 0.968 0.754 - - - - - - - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
24. tax1bp3 ENSDARG00000059177 4324 1.72 - 0.733 - - 0.987 - - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
25. pdgfra_1 ENSDARG00000070494, ENSDARG00000113952 1996 1.718 - 0.847 - - - 0.871 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
26. MAP4_1 MAP4_1 1153 1.715 - - - - 0.996 0.719 - - -
27. sema4e ENSDARG00000052997 607 1.713 0.964 - - 0.749 - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
28. kras ENSDARG00000010844 2885 1.698 0.971 - - - - 0.727 - - - v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
29. gorasp2 ENSDARG00000015126 3923 1.691 - - - 0.704 0.987 - - - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
30. arf6b ENSDARG00000052928 4585 1.685 0.930 0.755 - - - - - - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
31. dusp1 ENSDARG00000100515 2338 1.681 0.960 0.721 - - - - - - - dual specificity phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2018]
32. cpped1 ENSDARG00000031968, ENSDARG00000112438 693 1.674 0.965 0.709 - - - - - - - calcineurin-like phosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-118]
33. itm2ca ENSDARG00000043448 1265 1.667 0.963 - - 0.704 - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
34. elavl3 ENSDARG00000014420 8644 1.666 0.911 - - - 0.755 - - - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
35. atl3 ENSDARG00000004270 2806 1.662 0.951 - - 0.711 - - - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
36. sqrdl 1598 1.656 0.925 0.731 - - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
37. myh10 ENSDARG00000000103 7522 1.64 - - - - 0.865 0.775 - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
38. ddx19 ENSDARG00000005699 4602 1.632 - - - - 0.895 0.737 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
39. tob1b ENSDARG00000021372 7048 1.605 0.897 0.708 - - - - - - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
40. wdfy2 ENSDARG00000040453 406 1.605 - 0.810 - 0.795 - - - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
41. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.605 0.866 0.739 - - - - - - - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
42. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.604 0.872 - - - - 0.732 - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
43. api5 ENSDARG00000033597 6655 1.602 - - - - 0.892 0.710 - - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
44. cyp2aa8 ENSDARG00000104540 2947 1.584 0.759 0.825 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-041010-183]
45. ammecr1 ENSDARG00000012892 14475 1.541 0.827 - - - - 0.714 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
46. polr2a ENSDARG00000099966 5706 1.534 - 0.794 - - - 0.740 - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
47. erbb2ip 403 1.514 - 0.710 - 0.804 - - - - - erbb2 interacting protein, transcript variant X3
48. OXR1 OXR1 378 1.513 - 0.741 - 0.772 - - - - -
49. EIF4G1 EIF4G1 19676 1.503 - - - - 0.753 0.750 - - -
50. col4a5 ENSDARG00000052063 19251 1.484 0.774 - - - 0.710 - - - - collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]
51. ctdsp1 ENSDARG00000040674 2828 1.481 - - - 0.724 - 0.757 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
52. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 1.474 - 0.731 - 0.743 - - - - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
53. CU074314.1 CU074314.1 354 1.473 - 0.713 - 0.760 - - - - -
54. degs1 ENSDARG00000007347 2481 1.471 - 0.725 - 0.746 - - - - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
55. clstn2 ENSDARG00000060637 548 1.449 - 0.717 - 0.732 - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
56. blcap ENSDARG00000052073 8646 1.446 0.720 - - - - 0.726 - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
57. efcab7 ENSDARG00000020279 1030 1 - - - - - - 1.000 - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
58. PCDH9 ENSDARG00000063264 1309 1 - - - - - - 1.000 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
59. loxl2a ENSDARG00000044010 1906 1 - - - - - - 1.000 - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
60. MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 1 - - - - - - 1.000 - - mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]
61. phf2 ENSDARG00000018691 3341 1 - - - - - - 1.000 - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
62. TUBGCP6 1991 1 - - - - - - 1.000 - - tubulin, gamma complex associated protein 6
63. cep97 ENSDARG00000102407 1154 1 - - - - - - 1.000 - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
64. EIF4G1_1 EIF4G1_1 3721 1 - - - - - - 1.000 - -
65. wu:fj08f03 wu:fj08f03 1337 1 - - - - - - 1.000 - -
66. parp1 ENSDARG00000019529 6787 1 - - - - - - 1.000 - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
67. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 1 - - - - - - 1.000 - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
68. stx12 ENSDARG00000098813 2576 1 - - - - - - 1.000 - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
69. CT955967.1 ENSDARG00000099956 2885 1 - - - - - - 1.000 - -
70. rgma ENSDARG00000012248 2238 1 - - - - - - 1.000 - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
71. rbm39a ENSDARG00000011613 4520 1 - - - - - - 1.000 - - RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
72. aspg ENSDARG00000052942 1406 1 - - - - - - 1.000 - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
73. cth ENSDARG00000074301 3860 1 - - - - - - 1.000 - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
74. serpine2 ENSDARG00000029353 2274 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
75. AL772300.3 AL772300.3 1752 1 - - - - - - 1.000 - -
76. FP102272.1 FP102272.1 9473 0.999 - - - - - - 0.999 - -
77. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.999 - - - - - - 0.999 - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
78. bin2a ENSDARG00000003219 1369 0.999 - - - - - - 0.999 - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
79. ndufa7 ENSDARG00000036684 6051 0.999 - - - - - - 0.999 - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
80. vamp3 ENSDARG00000070161 6396 0.999 - - - - - - 0.999 - - vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]
81. rab1ba ENSDARG00000058044 5080 0.999 - - - - - - 0.999 - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
82. loxl1 ENSDARG00000054451 2485 0.999 - - - - - - 0.999 - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
83. hoxb8a ENSDARG00000056027 6340 0.999 - - - - - - 0.999 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
84. rab5aa ENSDARG00000018602 8947 0.999 - - - - - - 0.999 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
85. BX548078.1 ENSDARG00000093780 1325 0.999 - - - - - - 0.999 - -
86. cmip ENSDARG00000062933 4521 0.999 - - - - - - 0.999 - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
87. rc3h1 rc3h1 1087 0.998 - - - - 0.998 - - - -
88. d2hgdh ENSDARG00000060210 362 0.998 - - - - 0.998 - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
89. TANC2 TANC2 1104 0.998 - - - - 0.998 - - - -
90. TIMM21 ENSDARG00000071594 722 0.998 - - - - 0.998 - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
91. si:ch211-223a21.1 ENSDARG00000098892 306 0.998 - - - - 0.998 - - - - si:ch211-223a21.1 [Source:ZFIN;Acc:ZDB-GENE-110913-137]
92. si:ch211-132g1.3 ENSDARG00000089477 769 0.998 - - - - 0.998 - - - - si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
93. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 0.998 - - - - 0.998 - - - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
94. MEX3D MEX3D 293 0.998 - - - - 0.998 - - - -
95. zgc:101000 zgc:101000 9041 0.998 - - - - - - 0.998 - -
96. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.998 - - - - 0.998 - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
97. zgc:66443 ENSDARG00000057707 624 0.998 - - - - 0.998 - - - - zgc:66443 [Source:ZFIN;Acc:ZDB-GENE-040426-2945]
98. e2f5 ENSDARG00000038812 388 0.998 - - - - 0.998 - - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
99. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.998 - - - - - - 0.998 - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
100. CCDC106 CCDC106 1908 0.998 - - - - 0.998 - - - -

There are 1099 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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