Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chd

Gene Name Gene ID Reads Annotation
chd 56 chordin










Genes with expression patterns similar to chd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chd 56 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chordin
2. stx11a ENSDARG00000044039 39 2.449 - 0.845 0.802 - - 0.802 - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
3. si:ch211-270n8.4 87 2.421 - 0.814 - - - 0.745 0.862 - - si:ch211-270n8.4
4. C20H2orf70 C20H2orf70 8 1.783 - - 0.900 - - - - - 0.883
5. clcnk ENSDARG00000022560 355 1.761 - - - - - 0.936 0.825 - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
6. ccl-c5a ccl-c5a 217 1.699 - - - - - 0.931 0.768 - -
7. sema6d ENSDARG00000002748 133 1.697 - 0.867 - - - - - - 0.830 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
8. atp1b1a ENSDARG00000013144 19744 1.69 - - - - - 0.808 0.882 - - ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
9. slc23a1 ENSDARG00000015033 40 1.689 - - - - - - 0.806 - 0.883 solute carrier family 23 (ascorbic acid transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080804-2]
10. CU596012.2 CU596012.2 1046 1.685 - - - - - 0.832 0.853 - -
11. AL935046.1 AL935046.1 89 1.682 0.861 - - - - - 0.821 - -
12. si:ch211-207j7.2 ENSDARG00000090793 316 1.675 - - - - - 0.819 0.856 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
13. si:dkey-229d11.5 ENSDARG00000094392 33 1.675 - 0.845 0.830 - - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
14. chac2 ENSDARG00000055078 86 1.674 0.836 0.838 - - - - - - - ChaC, cation transport regulator homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-050706-146]
15. TBC1D17 ENSDARG00000005927 163 1.657 - 0.848 - - - 0.809 - - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
16. glis3 ENSDARG00000069726 59 1.652 - - - - - 0.835 0.817 - - GLIS family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2232]
17. slc12a3 ENSDARG00000013855 990 1.644 - - - - - 0.931 0.713 - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
18. RSPH1 289 1.641 - - - - - - 0.824 - 0.817 radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
19. BX248410.1 ENSDARG00000090038 3 1.64 - - 0.900 - - 0.740 - - - Schwann cell myelin protein-like [Source:NCBI gene;Acc:101884775]
20. megf11 ENSDARG00000062686 230 1.637 - 0.871 0.766 - - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
21. BX890577.2 BX890577.2 94 1.631 0.755 - - - - 0.876 - - -
22. BX571714.1 ENSDARG00000114727 243 1.626 - - - - - 0.861 0.765 - - SET domain containing 1A [Source:NCBI gene;Acc:556535]
23. CCDC178 4 1.607 0.715 - 0.892 - - - - - - coiled-coil domain containing 178, transcript variant X3
24. UBXN11 ENSDARG00000053828 22 1.607 - - 0.722 - - - - - 0.885 UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
25. si:ch1073-170o4.1 ENSDARG00000092780 18 1.601 0.861 - - - - 0.740 - - - si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
26. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 1.596 - - - - - 0.870 0.726 - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
27. AL928724.1 ENSDARG00000097525 421 1.596 - - - - - 0.778 0.818 - -
28. KCNJ12 KCNJ12 17 1.595 0.715 - 0.880 - - - - - -
29. psmb9a ENSDARG00000000656 16 1.591 - - 0.867 - 0.724 - - - - proteasome subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140]
30. atp1a1a.4 ENSDARG00000001870 1864 1.59 - - - - - 0.867 0.723 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
31. rltgr ENSDARG00000096533 33 1.589 - 0.805 - - - 0.784 - - - RAMP-like triterpene glycoside receptor [Source:ZFIN;Acc:ZDB-GENE-100727-4]
32. cdh17 ENSDARG00000005112 3816 1.587 - - - - - 0.886 0.701 - - cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
33. C10H11orf63 C10H11orf63 65 1.586 - 0.762 - - - - - - 0.824
34. fbxo30b ENSDARG00000019311 90 1.583 - 0.868 - - 0.715 - - - - F-box protein 30b [Source:ZFIN;Acc:ZDB-GENE-040426-1125]
35. illr4 ENSDARG00000008075 164 1.582 0.715 0.867 - - - - - - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
36. si:dkey-202b22.6 ENSDARG00000045552 190 1.578 - - 0.840 - - - 0.738 - - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
37. als2a ENSDARG00000075111 29 1.574 - 0.845 - - 0.729 - - - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
38. ccdc170 ENSDARG00000016161 18 1.569 0.715 - 0.854 - - - - - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
39. cx32.3 ENSDARG00000041787 33 1.56 0.715 0.845 - - - - - - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
40. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.56 0.806 0.754 - - - - - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
41. cyp2k18 ENSDARG00000104593 27 1.56 0.715 0.845 - - - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
42. si:ch211-13o20.1 si:ch211-13o20.1 30 1.555 - - 0.836 - 0.719 - - - -
43. hnf4g ENSDARG00000071565 117 1.552 - 0.735 - - - - 0.817 - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
44. eps8l3 eps8l3 144 1.551 - 0.708 - - - - 0.843 - -
45. fasn_1 ENSDARG00000087657 31 1.55 - - 0.723 - - - - - 0.827 fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
46. enpp6 ENSDARG00000040469 187 1.549 0.789 - - - - - 0.760 - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
47. ugt2b6 ugt2b6 111 1.544 - 0.797 - - - - 0.747 - -
48. hsd17b3 ENSDARG00000023287, ENSDARG00000115935, ENSDARG00000116671 134 1.541 - 0.723 - - - - 0.818 - - hydroxysteroid (17-beta) dehydrogenase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1339]
49. CABZ01039859.1 ENSDARG00000076361 540 1.53 - 0.778 0.752 - - - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
50. sfxn3 ENSDARG00000057374, ENSDARG00000112320 1766 1.523 - - - - - 0.754 0.769 - - sideroflexin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2092]
51. GPR119 GPR119 41 1.522 - - - - - 0.707 0.815 - -
52. ccdc11 ccdc11 79 1.517 0.715 - 0.802 - - - - - -
53. mecr ENSDARG00000032326 314 1.51 - 0.809 - - - - - - 0.701 mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
54. BX890577.1 BX890577.1 257 1.502 - 0.733 - - - - 0.769 - -
55. C9H3orf38 C9H3orf38 83 1.501 - 0.722 - - - 0.779 - - -
56. SLC3A2 SLC3A2 135 1.501 - - - - - 0.731 0.770 - -
57. si:ch211-120g10.1 ENSDARG00000090930 275 1.5 - - - - - 0.736 0.764 - - si:ch211-120g10.1 [Source:ZFIN;Acc:ZDB-GENE-130531-56]
58. esrrb ENSDARG00000100847 636 1.499 - - - - - 0.771 0.728 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
59. ponzr1 ENSDARG00000090444 540 1.499 - - - - - 0.730 0.769 - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
60. zgc:158222 ENSDARG00000051873, ENSDARG00000112532 642 1.494 - - - - - 0.742 0.752 - - zgc:158222 [Source:ZFIN;Acc:ZDB-GENE-070112-1522]
61. AL954146.5 AL954146.5 202 1.492 - - - - - 0.764 0.728 - -
62. bsnd ENSDARG00000086265 178 1.49 - 0.720 - - - 0.770 - - - barttin CLCNK-type chloride channel accessory beta subunit [Source:ZFIN;Acc:ZDB-GENE-070705-548]
63. CABZ01064671.1 ENSDARG00000039935 21 1.487 0.715 - 0.772 - - - - - -
64. hvcn1 ENSDARG00000040338 571 1.485 - 0.723 - - - 0.762 - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
65. ECM1 ECM1 87 1.474 - - - - - - 0.769 - 0.705
66. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 1.472 - - - - - 0.734 0.738 - - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
67. slc12a10.3 ENSDARG00000055253 127 1.469 - 0.759 - - - 0.710 - - - slc12a10.3 solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-060503-518]
68. vasa vasa 64 1.459 - - - - - 0.705 0.754 - -
69. PAQR8 ENSDARG00000088828 26 1.458 0.715 - - - - - 0.743 - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
70. U2_4 U2_4 41 1.457 0.715 - 0.742 - - - - - -
71. BX119916.1 BX119916.1 19 1.452 0.715 - - - - - 0.737 - -
72. tmem72 ENSDARG00000069332 19 1.448 - 0.708 - - - 0.740 - - - transmembrane protein 72 [Source:ZFIN;Acc:ZDB-GENE-090313-175]
73. jam2b ENSDARG00000079071 1031 1.444 - 0.716 - - - - 0.728 - - junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
74. slc13a5 slc13a5 15 1.441 0.715 - - - - - 0.726 - -
75. slc12a1 ENSDARG00000098096 526 1.437 - - - - - 0.721 0.716 - - solute carrier family 12 (sodium/potassium/chloride transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080130-3]
76. si:ch211-173n18.4 129 1.437 0.715 - - - - 0.722 - - - si:ch211-173n18.4, transcript variant X1
77. ERICH2 ENSDARG00000107534 160 1.427 - - - - - 0.712 0.715 - - glutamate-rich 2 [Source:ZFIN;Acc:ZDB-GENE-131231-2]
78. pde6a ENSDARG00000000380 40 1.422 0.715 - - - - - 0.707 - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
79. rdh12l ENSDARG00000045277 139 0.967 - - 0.967 - - - - - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
80. THAP6 THAP6 57 0.96 - 0.960 - - - - - - -
81. CABZ01079241.1 ENSDARG00000098424 88 0.959 - 0.959 - - - - - - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
82. polr1b ENSDARG00000077469, ENSDARG00000115880 313 0.955 - - - - - 0.955 - - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
83. tekt2 ENSDARG00000028973 160 0.951 - - - - - - 0.951 - - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
84. CU467646.3 ENSDARG00000099076 36 0.95 - 0.950 - - - - - - - mucin-2-like [Source:NCBI gene;Acc:108179180]
85. AP1S3 AP1S3 8 0.946 - - - - - 0.946 - - -
86. ttc12 ENSDARG00000056896 97 0.945 - 0.945 - - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
87. kal1a kal1a 684 0.94 - 0.940 - - - - - - -
88. CU570781.1 ENSDARG00000094656 49 0.939 - - 0.939 - - - - - -
89. si:ch211-69i14.10 si:ch211-69i14.10 1939 0.939 - - - - - 0.939 - - -
90. GPR141_1 GPR141_1 33 0.936 - - - - - 0.936 - - -
91. wu:fb68b01 wu:fb68b01 42 0.935 - - - - - 0.935 - - -
92. SPTBN1 ENSDARG00000102883 26 0.935 - 0.935 - - - - - - - spectrin, beta, non-erythrocytic 1 [Source:ZFIN;Acc:ZDB-GENE-031006-3]
93. mycbpap ENSDARG00000069194 32 0.921 - - - - - 0.921 - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
94. esyt1a ENSDARG00000034714 129 0.921 - 0.921 - - - - - - - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
95. vil1 ENSDARG00000040466 81 0.92 - - - - - 0.920 - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
96. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.92 - - - - - - 0.920 - - tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
97. TYRP1 TYRP1 1450 0.916 - - - - - - 0.916 - -
98. cpne2 ENSDARG00000007753 206 0.915 - - - - - - 0.915 - - copine II [Source:ZFIN;Acc:ZDB-GENE-030131-7896]
99. PRRT4 ENSDARG00000088343 36 0.913 - - - - - - - - 0.913 proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
100. si:dkey-167k11.1 si:dkey-167k11.1 14 0.912 - 0.912 - - - - - - -

There are 1152 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA