Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for chat

Gene Name Gene ID Reads Annotation
chat chat 463










Genes with expression patterns similar to chat

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chat chat 463 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. zgc:113531 ENSDARG00000038794 2063 3.275 0.856 0.735 - - - 0.828 0.856 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
3. hectd2 ENSDARG00000061194 559 3.266 0.774 0.740 - - - 0.838 0.914 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
4. sv2c ENSDARG00000059997 592 3.198 0.760 0.705 - - - 0.849 0.884 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
5. CU928222.1 ENSDARG00000097436 1662 2.817 0.959 - - - - 0.891 0.967 - -
6. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.78 0.856 - - - - 0.948 0.976 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
7. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.759 0.799 - - - - 0.963 0.997 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
8. neurog1 ENSDARG00000056130 3924 2.757 0.813 - - - - 0.948 0.996 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
9. slc18a3a ENSDARG00000006356 1285 2.747 0.811 - - - - 0.943 0.993 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
10. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.731 0.875 - - - - 0.887 0.969 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
11. calca ENSDARG00000056590 150 2.723 0.905 - - - - 0.843 0.975 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
12. tmie ENSDARG00000069423 305 2.71 0.837 - - - - 0.883 0.990 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
13. vim ENSDARG00000010008 3551 2.695 0.877 - - - - 0.896 0.922 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
14. im:7162084 im:7162084 665 2.695 0.832 - - - - 0.878 0.985 - -
15. nova2 ENSDARG00000017673 7685 2.694 0.771 - - - - 0.931 0.992 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
16. SLC5A7 SLC5A7 453 2.691 0.850 - - - - 0.876 0.965 - -
17. chga ENSDARG00000008829 1086 2.683 0.873 - - - - 0.863 0.947 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
18. nes ENSDARG00000088805 2710 2.682 0.812 - - - - 0.899 0.971 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
19. nkx6.2 ENSDARG00000104735 5081 2.677 0.861 - - - - 0.831 0.985 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
20. pdzrn4 ENSDARG00000045687 362 2.675 0.858 - - - - 0.832 0.985 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
21. fyna ENSDARG00000011370 1679 2.655 0.857 - - - - 0.866 0.932 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
22. gfap ENSDARG00000025301 5584 2.653 0.788 - - - - 0.880 0.985 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
23. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.651 0.793 - - - - 0.900 0.958 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
24. BX511121.1 ENSDARG00000029997 1774 2.649 0.797 - - - - 0.914 0.938 - -
25. si:dkey-169l5.3 si:dkey-169l5.3 239 2.648 0.783 - - - - 0.887 0.978 - -
26. prdm12b ENSDARG00000007430 914 2.636 0.791 - - - - 0.904 0.941 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
27. nrarpb ENSDARG00000018958 6225 2.63 0.807 - - - - 0.839 0.984 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
28. ADAMTS3 ENSDARG00000060127 2839 2.625 0.871 - - - - 0.835 0.919 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
29. myt1b ENSDARG00000102879 5411 2.615 0.739 - - - - 0.899 0.977 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
30. ctnnd2b ENSDARG00000003779 964 2.612 0.755 - - - - 0.873 0.984 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
31. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.611 - 0.742 - - - 0.903 0.966 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
32. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.611 0.744 - - - - 0.882 0.985 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
33. pcp4a ENSDARG00000053130 1024 2.605 0.742 0.923 - - - - 0.940 - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
34. si:ch211-247j9.1 ENSDARG00000079283 217 2.602 0.835 - - - - 0.836 0.931 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
35. gabrg2 ENSDARG00000053665 434 2.601 - 0.799 - - - 0.898 0.904 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
36. prdm8 ENSDARG00000025017 370 2.6 0.904 - - - - 0.848 0.848 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
37. SEMA7A ENSDARG00000078707 465 2.599 - 0.842 - - - 0.832 0.925 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
38. CABZ01029738.1 CABZ01029738.1 327 2.595 0.799 - - - - 0.859 0.937 - -
39. sall3b ENSDARG00000057586 982 2.585 0.819 - - - - 0.812 0.954 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
40. hnrnpa3 ENSDARG00000059351 453 2.579 0.911 - - - - 0.781 0.887 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
41. pax6a ENSDARG00000103379 3061 2.569 0.742 - - - - 0.881 0.946 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
42. dbx1a ENSDARG00000086393 3161 2.565 0.764 - - - - 0.933 0.868 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
43. clstn1 ENSDARG00000031720 5286 2.565 0.830 - - - - 0.813 0.922 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
44. nhlh2 ENSDARG00000025495 1860 2.561 0.746 - - - - 0.840 0.975 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
45. irx1b ENSDARG00000056594 2224 2.559 0.768 - - - - 0.799 0.992 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
46. st18 663 2.556 0.877 - - - - 0.738 0.941 - - suppression of tumorigenicity 18, zinc finger
47. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 2.554 0.925 - - - - 0.783 0.846 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
48. hoxa5a ENSDARG00000102501 1667 2.552 0.861 - - - - 0.859 0.832 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
49. si:ch73-265d7.2 ENSDARG00000116713 2142 2.55 0.858 - - - - 0.766 0.926 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
50. rusc1 ENSDARG00000078125 617 2.544 - 0.840 - - - 0.741 0.963 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
51. mnx2a ENSDARG00000042106 939 2.542 0.806 - - - - 0.844 0.892 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
52. epha4b ENSDARG00000011600 3110 2.539 0.747 - - - - 0.848 0.944 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
53. CDK5R1 CDK5R1 562 2.535 0.721 - - - - 0.927 0.887 - -
54. gfra1b ENSDARG00000102564 821 2.532 0.929 - - - - 0.734 0.869 - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
55. ncana 1537 2.528 0.838 - - - - 0.753 0.937 - - neurocan a
56. si:ch73-21g5.7 ENSDARG00000093156 9412 2.521 0.819 - - - - 0.706 0.996 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
57. her2 ENSDARG00000038205 3219 2.518 0.748 - - - - 0.784 0.986 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
58. ndrg4 ENSDARG00000103937 1234 2.517 - 0.833 - - - 0.762 0.922 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
59. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.509 0.821 - - - - 0.747 0.941 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
60. hmp19 2554 2.509 0.784 - - - - 0.758 0.967 - - HMP19 protein
61. EFCC1 ENSDARG00000077826 1359 2.508 0.741 - - - - 0.870 0.897 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
62. CHL1 CHL1 1553 2.504 0.717 - - - - 0.849 0.938 - -
63. sema3c ENSDARG00000034300 881 2.501 0.850 - - - - 0.733 0.918 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
64. atp6v0a1b ENSDARG00000015174 1052 2.484 - 0.724 - - - 0.843 0.917 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
65. mir10d-1 mir10d-1 860 2.483 0.736 - - - - 0.811 0.936 - -
66. st8sia2 ENSDARG00000018788 2183 2.477 0.743 - - - - 0.797 0.937 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
67. PRKAR2B ENSDARG00000036446 812 2.476 0.792 - - - - 0.750 0.934 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
68. sept5a ENSDARG00000013843 1206 2.472 - 0.703 - - - 0.878 0.891 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
69. CABZ01028287.1 CABZ01028287.1 626 2.472 0.840 - - - - 0.824 0.808 - -
70. her12 ENSDARG00000032963 754 2.471 0.714 - - - - 0.818 0.939 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
71. pax6b ENSDARG00000045936 349 2.461 0.705 - - - - 0.833 0.923 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
72. flrt1b ENSDARG00000075597 465 2.459 0.734 - - - - 0.857 0.868 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
73. stmn2b ENSDARG00000070537 1586 2.451 - 0.805 - - - 0.769 0.877 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
74. kif5c ENSDARG00000076027 424 2.44 0.748 - - - - 0.836 0.856 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
75. SPTBN4_1 ENSDARG00000092624 473 2.436 0.724 - - - - 0.906 0.806 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
76. slc35g2b ENSDARG00000045447 378 2.436 0.736 - - - - 0.765 0.935 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
77. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.435 0.777 - - - - 0.809 0.849 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
78. her4.1 ENSDARG00000056732 1264 2.433 0.743 - - - - 0.760 0.930 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
79. sst1.1 ENSDARG00000040799 677 2.413 0.836 - - - - 0.791 0.786 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
80. RPH3A RPH3A 309 2.41 0.744 0.719 - - - - 0.947 - -
81. atp1b4 ENSDARG00000053262 1337 2.407 0.762 - - - - 0.732 0.913 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
82. fzd3a ENSDARG00000021664 1958 2.402 0.708 - - - - 0.773 0.921 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
83. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.402 - 0.746 - - - 0.720 0.936 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
84. gad2 ENSDARG00000015537 724 2.378 0.839 - - - - 0.724 0.815 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
85. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.376 - 0.716 - - - 0.724 0.936 - -
86. neurod neurod 1189 2.351 0.871 - - - - 0.764 0.716 - -
87. olig2 ENSDARG00000040946 1405 2.328 0.744 0.704 - - - - 0.880 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
88. rbfox1 ENSDARG00000014746 2808 2.306 0.769 - - - - 0.826 0.711 - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
89. pkd2l1 ENSDARG00000022503 372 2.289 0.823 - - - - 0.715 0.751 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
90. PRIMA1 PRIMA1 459 2.284 0.757 - - - - 0.705 0.822 - -
91. scamp5 scamp5 797 2.275 - 0.728 - - - 0.750 0.797 - -
92. ank2b ENSDARG00000043313 3065 2.27 0.742 - - - - 0.773 0.755 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
93. cacng2b ENSDARG00000102376 213 2.231 0.790 - - - - 0.735 0.706 - - calcium channel, voltage-dependent, gamma subunit 2b [Source:ZFIN;Acc:ZDB-GENE-090624-3]
94. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 2.185 0.728 - - - - 0.748 0.709 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
95. STMN3 ENSDARG00000038465 1009 1.921 - - - - - 0.942 0.979 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
96. AGO1 ENSDARG00000092644 4521 1.91 - - - - - 0.927 0.983 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
97. msi1 ENSDARG00000010710 2634 1.903 - - - - - 0.934 0.969 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
98. nell2b ENSDARG00000062797 854 1.896 - - - - - 0.919 0.977 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
99. ptprna ENSDARG00000058646 1327 1.894 - - - - - 0.915 0.979 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
100. TUBA1A ENSDARG00000001889 25294 1.894 - - - - - 0.909 0.985 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]

There are 1639 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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