Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chac1

Gene Name Gene ID Reads Annotation
chac1 ENSDARG00000070426 17552 ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]










Genes with expression patterns similar to chac1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chac1 ENSDARG00000070426 17552 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
2. txlnba ENSDARG00000020594 9385 3.061 - - 0.760 0.702 - - 0.809 - 0.790 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
3. suclg1 ENSDARG00000052712 17570 2.443 - 0.905 0.720 - - - - - 0.818 succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
4. sgcb ENSDARG00000052341 4168 2.43 - - - - - 0.758 0.901 - 0.771 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
5. atp5ib 19664 2.413 - - 0.791 0.754 - - 0.868 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
6. dldh ENSDARG00000008785 15202 2.363 - - - - - 0.715 0.873 - 0.775 dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
7. znf106a ENSDARG00000016651 6049 2.358 - - - - - 0.767 0.775 - 0.816 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
8. tmem161a ENSDARG00000012790 16094 2.356 - - - - - 0.769 0.754 - 0.833 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
9. larp1b ENSDARG00000061169 9939 2.337 - - 0.751 - - 0.726 0.860 - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
10. nexn ENSDARG00000057317 10972 2.335 - - 0.732 - - - 0.803 - 0.800 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
11. hspb1 ENSDARG00000041065 13534 2.322 - - 0.833 0.756 - - - - 0.733 heat shock protein, alpha-crystallin-related, 1 [Source:ZFIN;Acc:ZDB-GENE-030326-4]
12. klhl41b ENSDARG00000006757 10762 2.311 - - 0.719 - - - 0.798 - 0.794 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
13. pygmb ENSDARG00000013317 5454 2.304 - - 0.711 - - - 0.807 - 0.786 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
14. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.277 - - 0.758 - - - 0.778 - 0.741 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
15. atp1b3b ENSDARG00000042837 5163 2.274 - - 0.766 - - - 0.784 - 0.724 ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
16. klhl31 ENSDARG00000039066 13656 2.258 - - 0.702 0.736 - - - - 0.820 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
17. unc45b ENSDARG00000008433 8298 2.235 - - - 0.730 - - 0.777 - 0.728 unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
18. PTPLA PTPLA 4044 2.233 - - 0.709 - - - 0.795 - 0.729
19. chrnd ENSDARG00000019342 2728 2.216 - - 0.722 - - - 0.760 - 0.734 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
20. cav3 ENSDARG00000024141 14906 2.205 - - - 0.716 - 0.706 0.783 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
21. ntmt1 ENSDARG00000022399 5779 2.197 - - - 0.742 - - 0.723 - 0.732 N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
22. klhl40b ENSDARG00000019125 3633 2.184 - - - - - 0.754 0.725 - 0.705 kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
23. atp5g3a 9539 1.864 - 0.943 - - - - 0.921 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
24. sdhdb ENSDARG00000030139 9761 1.761 - - - - - - 0.910 - 0.851 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
25. dars ENSDARG00000070043 6854 1.751 - - - - - - 0.926 - 0.825 aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
26. apobec2a ENSDARG00000018881 4790 1.74 - - - - - 0.959 - - 0.781 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
27. SYNPO2 SYNPO2 7382 1.73 - - - - - - 0.937 - 0.793
28. ndufb9 ENSDARG00000041314, ENSDARG00000112557 15434 1.729 - 0.918 - - - - - - 0.811 NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
29. tgfbi ENSDARG00000071586 17779 1.703 - 0.916 - - - - 0.787 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
30. pmp22b ENSDARG00000060457 20406 1.695 - 0.892 - - - - 0.803 - - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
31. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.695 - - - - - - 0.847 - 0.848 ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
32. mgea5 6076 1.672 - 0.941 - - - 0.731 - - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X2
33. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.671 - 0.940 - - - 0.731 - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
34. METTL21C METTL21C 1717 1.667 - 0.932 - - - - 0.735 - -
35. mdh2 ENSDARG00000043371 14485 1.664 - - - - - - 0.761 - 0.903 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
36. NAT16 ENSDARG00000086222 4682 1.661 - 0.934 - 0.727 - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
37. ndufb8 ENSDARG00000010113 11385 1.643 - 0.832 - - - - - - 0.811 NADH:ubiquinone oxidoreductase subunit B8 [Source:ZFIN;Acc:ZDB-GENE-040426-1858]
38. aplp2 ENSDARG00000054864 7958 1.642 - 0.935 - - - - 0.707 - - amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]
39. ccnd1 ENSDARG00000101637 34762 1.596 - 0.712 - - - 0.884 - - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
40. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.591 - - - - - - 0.802 - 0.789 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
41. uqcrc2b ENSDARG00000071691 13296 1.59 - - - 0.753 - - 0.837 - - ubiquinol-cytochrome c reductase core protein 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1269]
42. aass ENSDARG00000051816 3795 1.587 - - - - - - 0.831 - 0.756 aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
43. kars ENSDARG00000103799 20937 1.586 - 0.884 - 0.702 - - - - - lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
44. cap2 ENSDARG00000104478 3266 1.585 - - - - - - 0.783 - 0.802 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
45. tmem182 tmem182 12589 1.582 - - 0.780 - - - 0.802 - -
46. si:ch211-156j16.1 ENSDARG00000092035 7441 1.576 - - - - - - 0.769 - 0.807 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
47. AIMP1 ENSDARG00000060036 4136 1.574 - - 0.796 - - - - - 0.778 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
48. cox7a2a ENSDARG00000053217 12564 1.574 - - - 0.710 - - - - 0.864 cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
49. mdh1b ENSDARG00000018008 3196 1.569 - - - - - - 0.805 - 0.764 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
50. tnnt2d ENSDARG00000002988 7590 1.569 - - - - - - 0.769 - 0.800 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
51. myod1 ENSDARG00000030110 6019 1.567 - - - - - - 0.791 - 0.776 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
52. eef2k ENSDARG00000035835 2906 1.565 - - - - - - 0.778 - 0.787 eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
53. mybpc3 ENSDARG00000011615 7271 1.563 - - - - - 0.758 - - 0.805 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
54. txlnbb ENSDARG00000076241 6396 1.562 - - - - - - 0.758 - 0.804 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
55. sptb ENSDARG00000030490 7128 1.559 - - - - - - 0.792 - 0.767 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
56. mafa ENSDARG00000015890 2140 1.551 - - - - - - 0.788 - 0.763 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
57. prx ENSDARG00000017246 6183 1.549 - - - - - - 0.803 - 0.746 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
58. ndufb10 ENSDARG00000028889 7680 1.548 - - - - - - 0.820 - 0.728 NADH:ubiquinone oxidoreductase subunit B10 [Source:ZFIN;Acc:ZDB-GENE-040426-1691]
59. mybphb ENSDARG00000003081 5208 1.547 - - - - - - 0.805 - 0.742 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
60. agla ENSDARG00000103811 2856 1.547 - - 0.769 - - - 0.778 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
61. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.546 - - - - - - 0.771 - 0.775 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
62. rp42-pen rp42-pen 3395 1.545 - - - - - - 0.772 - 0.773
63. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.544 - - - - - - 0.788 - 0.756 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
64. myhz2 ENSDARG00000012944 69921 1.542 - - - 0.737 - - 0.805 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
65. vcl vcl 6667 1.541 - - - - - 0.759 - - 0.782
66. zgc:92518 ENSDARG00000016343 3837 1.536 - - - - - - 0.808 - 0.728 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
67. casq1b ENSDARG00000018105 2643 1.536 - - - - - - 0.786 - 0.750 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
68. zgc:92113 1738 1.534 - - - - - - 0.779 - 0.755 zgc:92113
69. ryr1b ENSDARG00000023797 5693 1.534 - - - - - - 0.799 - 0.735 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
70. chrna1 ENSDARG00000009021 2931 1.533 - - - - - - 0.785 - 0.748 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
71. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 1.532 - - - 0.784 - - - - 0.748 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
72. jph2 ENSDARG00000028625 6706 1.53 - - - - - - 0.788 - 0.742 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
73. pvalb4 ENSDARG00000024433 35736 1.528 - - 0.752 - - - 0.776 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
74. BX294434.1 ENSDARG00000061272 6493 1.527 - - - - - - 0.800 - 0.727 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
75. zgc:158296 ENSDARG00000070923 3935 1.527 - - - - - - 0.776 - 0.751 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
76. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.526 - - - - - - 0.719 - 0.807 G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
77. IGFN1 IGFN1 5030 1.524 - - - - - 0.764 - - 0.760
78. hhatla ENSDARG00000039051 6598 1.523 - - - - - - 0.796 - 0.727 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
79. tnnc1b ENSDARG00000037539 13945 1.521 - - - - - - 0.775 - 0.746 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
80. eprs ENSDARG00000060494 4729 1.52 - - - - - 0.749 0.771 - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
81. pcmt ENSDARG00000015201 5132 1.519 - - - - - - 0.739 - 0.780 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
82. flot1b ENSDARG00000037998 13600 1.518 - - - - - - 0.712 - 0.806 flotillin 1b [Source:ZFIN;Acc:ZDB-GENE-020430-2]
83. sox6 ENSDARG00000015536 7728 1.517 - - - - - - 0.772 - 0.745 SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
84. hsp90aa1.1 ENSDARG00000010478 47784 1.517 - - - 0.770 - - 0.747 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
85. txnipb ENSDARG00000070000 2365 1.516 - - - - - - 0.784 - 0.732 thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
86. smyd2b ENSDARG00000005629 8181 1.515 - - 0.785 - - - - - 0.730 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
87. smtnl1 ENSDARG00000041257 7410 1.512 - - - - - - 0.785 - 0.727 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
88. tmem47 ENSDARG00000057322 4691 1.511 - - - - - - 0.796 - 0.715 transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
89. myoz2a ENSDARG00000012311 1373 1.511 - - - - - - 0.790 - 0.721 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
90. tnnt2c ENSDARG00000032242 28801 1.511 - - - 0.780 - - 0.731 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
91. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.508 - - - - - - 0.737 - 0.771 sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
92. PTGES3L PTGES3L 4801 1.508 - - - - - - 0.750 - 0.758
93. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 1.507 - - - - - - 0.779 - 0.728 troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
94. CR354540.2 ENSDARG00000117517 18452 1.505 - - - - - - 0.779 - 0.726
95. timm8b ENSDARG00000055708 7291 1.503 - - - - - - 0.738 - 0.765 translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
96. smyd1b ENSDARG00000091253 4964 1.501 - - - 0.782 - - - - 0.719 SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
97. pbxip1a ENSDARG00000071015 4960 1.5 - - - - - - 0.799 - 0.701 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
98. trim55a ENSDARG00000029596 2858 1.5 - - - - - - 0.753 - 0.747 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
99. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.5 - - 0.741 - - - 0.759 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
100. xirp2a ENSDARG00000071113 7113 1.5 - - - - - - 0.788 - 0.712 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]

There are 702 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA