Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ch25h

Gene Name Gene ID Reads Annotation
ch25h ENSDARG00000045190 35 cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]










Genes with expression patterns similar to ch25h

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ch25h ENSDARG00000045190 35 5 - 1.000 1.000 1.000 1.000 - - 1.000 - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
2. chrna7 ENSDARG00000101702 50 1.525 - - 0.805 - - - - 0.720 - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
3. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.46 - - - 0.720 - - - 0.740 - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
4. DYNLRB2 DYNLRB2 12 1 - - - - 1.000 - - - -
5. si:ch211-263p13.7 ENSDARG00000077622 2 1 - - - - 1.000 - - - - si:ch211-263p13.7 [Source:ZFIN;Acc:ZDB-GENE-091204-336]
6. FAM20C FAM20C 4 1 - - - - 1.000 - - - -
7. nmrk1 ENSDARG00000037913 18 1 - - - - 1.000 - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
8. armc2 ENSDARG00000022660 3 1 - - - - 1.000 - - - - armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
9. ubxn10 ENSDARG00000052535 24 1 - - - - 1.000 - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
10. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
11. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 - - - - 1.000 - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
12. ebi3 ENSDARG00000053620 5 1 - - - - 1.000 - - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
13. C1RL C1RL 2 1 - - - - 1.000 - - - -
14. CT955987.1 CT955987.1 9 1 - - - - 1.000 - - - -
15. PDE6H 3 1 - - - - 1.000 - - - - phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
16. FBXL19 FBXL19 8 1 - - - - 1.000 - - - -
17. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - 1.000 - - - -
18. tenc1a tenc1a 3 1 - - - - 1.000 - - - -
19. stxbp5l ENSDARG00000006383, ENSDARG00000110740 3 1 - - - - 1.000 - - - - syntaxin binding protein 5-like [Source:ZFIN;Acc:ZDB-GENE-041210-220]
20. si:ch211-133l5.7 ENSDARG00000095633 3 1 - - - - 1.000 - - - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
21. PTPRJ PTPRJ 1 1 - - - - 1.000 - - - -
22. PHKA1 PHKA1 10 1 - - - - 1.000 - - - -
23. ppfia2 ENSDARG00000013000 45 1 - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
24. FP236276.2 FP236276.2 43 0.999 - 0.999 - - - - - - -
25. uroc1 ENSDARG00000070394 357 0.998 - 0.998 - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
26. bbs4 ENSDARG00000063522 247 0.998 - 0.998 - - - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
27. si:dkey-261l7.2 ENSDARG00000094345 51 0.998 - 0.998 - - - - - - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
28. fam69c ENSDARG00000105040 295 0.998 - 0.998 - - - - - - - family with sequence similarity 69, member C [Source:ZFIN;Acc:ZDB-GENE-030131-8001]
29. gpr112b gpr112b 28 0.998 - 0.998 - - - - - - -
30. si:ch73-83c10.2 si:ch73-83c10.2 22 0.998 - 0.998 - - - - - - -
31. MSLNL MSLNL 41 0.998 - 0.998 - - - - - - -
32. crfb12 ENSDARG00000052413 47 0.998 - 0.998 - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
33. si:ch211-191a16.2 ENSDARG00000095665 16 0.998 - 0.998 - - - - - - - si:ch211-191a16.2 [Source:ZFIN;Acc:ZDB-GENE-081028-45]
34. fbln5 ENSDARG00000039273 105 0.998 - 0.998 - - - - - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
35. med30 ENSDARG00000101115 133 0.998 - 0.998 - - - - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
36. shq1 ENSDARG00000058522 123 0.997 - 0.997 - - - - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
37. FOXO6_1 FOXO6_1 73 0.997 - 0.997 - - - - - - -
38. BX321875.3 ENSDARG00000112569 24 0.997 - 0.997 - - - - - - -
39. drd3 ENSDARG00000032131, ENSDARG00000110679 25 0.996 - 0.996 - - - - - - - dopamine receptor D3 [Source:ZFIN;Acc:ZDB-GENE-021119-1]
40. cnstb ENSDARG00000042759 105 0.996 - 0.996 - - - - - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
41. ttc9c ENSDARG00000007025 463 0.996 - 0.996 - - - - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
42. C18H15orf61 C18H15orf61 104 0.996 - 0.996 - - - - - - -
43. esm1 ENSDARG00000104370 186 0.996 - 0.996 - - - - - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
44. CR759791.1 ENSDARG00000088591 160 0.995 - 0.995 - - - - - - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
45. LUZP1 ENSDARG00000075556 55 0.995 - 0.995 - - - - - - - leucine zipper protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-90]
46. cry5 ENSDARG00000019498 90 0.995 - 0.995 - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
47. azi1_1 azi1_1 1375 0.995 - 0.995 - - - - - - -
48. klf6b ENSDARG00000038561 27 0.994 - - - - 0.994 - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
49. il4r il4r 75 0.994 - 0.994 - - - - - - -
50. GSG1 GSG1 10 0.994 - - - - 0.994 - - - -
51. LRIF1_1 LRIF1_1 228 0.994 - 0.994 - - - - - - -
52. epb41l4a ENSDARG00000040087 1013 0.994 - 0.994 - - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
53. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.994 - 0.994 - - - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
54. si:rp71-7l19.6 si:rp71-7l19.6 12 0.994 - - - - 0.994 - - - -
55. exo1 ENSDARG00000056832, ENSDARG00000112534 186 0.994 - 0.994 - - - - - - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
56. si:dkey-58f10.12 ENSDARG00000092680 258 0.994 - - - - 0.994 - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
57. si:ch211-11n16.2 ENSDARG00000099779 417 0.993 - 0.993 - - - - - - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
58. CNGB3 CNGB3 7 0.993 - - - - 0.993 - - - -
59. ctdspla ENSDARG00000071673 1447 0.993 - 0.993 - - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
60. si:ch211-149b19.3 ENSDARG00000076011 306 0.993 - 0.993 - - - - - - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
61. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.993 - 0.993 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
62. pou4f1 ENSDARG00000005559 821 0.992 - 0.992 - - - - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
63. casp7 ENSDARG00000091836 657 0.992 - 0.992 - - - - - - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
64. crcp ENSDARG00000069373 730 0.992 - 0.992 - - - - - - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
65. CABZ01006980.1 CABZ01006980.1 5 0.991 - - - - 0.991 - - - -
66. il12a ENSDARG00000038878 3 0.991 - - - - 0.991 - - - - interleukin 12a [Source:ZFIN;Acc:ZDB-GENE-060724-1]
67. matk ENSDARG00000074670 225 0.991 - 0.991 - - - - - - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
68. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.991 - 0.991 - - - - - - - tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
69. rab34b ENSDARG00000010977 590 0.991 - 0.991 - - - - - - - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
70. CABZ01080492.1 CABZ01080492.1 495 0.991 - 0.991 - - - - - - -
71. asmtl ENSDARG00000021433, ENSDARG00000114151 550 0.99 - 0.990 - - - - - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
72. cyp27a1.2 ENSDARG00000069186 10 0.99 - - - - 0.990 - - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 2 [Source:ZFIN;Acc:ZDB-GENE-081104-511]
73. AL929007.2 AL929007.2 117 0.99 - 0.990 - - - - - - -
74. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 0.99 - 0.990 - - - - - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
75. lmf2a ENSDARG00000078094 352 0.989 - 0.989 - - - - - - - lipase maturation factor 2a [Source:ZFIN;Acc:ZDB-GENE-080723-47]
76. fam83fb ENSDARG00000104188 79 0.989 - 0.989 - - - - - - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
77. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 0.989 - 0.989 - - - - - - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
78. cdkn2c ENSDARG00000057610 179 0.989 - 0.989 - - - - - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
79. ARHGAP32_1 ARHGAP32_1 124 0.989 - 0.989 - - - - - - -
80. si:ch73-138e16.8 175 0.989 - 0.989 - - - - - - - si:ch73-138e16.8
81. gna14 ENSDARG00000035178 618 0.989 - 0.989 - - - - - - - guanine nucleotide binding protein (G protein), alpha 14 [Source:ZFIN;Acc:ZDB-GENE-040808-7]
82. TRIM35_10 TRIM35_10 484 0.988 - 0.988 - - - - - - -
83. CR759907.4 CR759907.4 14 0.988 - - - - 0.988 - - - -
84. C5H11orf1 C5H11orf1 78 0.988 - 0.988 - - - - - - -
85. yars2 ENSDARG00000077299 5 0.988 - - - - 0.988 - - - - tyrosyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-6268]
86. PHF13 ENSDARG00000102023 1102 0.987 - 0.987 - - - - - - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
87. TNFRSF14_3 TNFRSF14_3 135 0.987 - 0.987 - - - - - - -
88. tdrd3 ENSDARG00000025421 633 0.987 - 0.987 - - - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
89. tgm1 ENSDARG00000017799 442 0.987 - 0.987 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
90. CU861453.1 ENSDARG00000097192 271 0.987 - 0.987 - - - - - - -
91. pargl ENSDARG00000101719 155 0.986 - 0.986 - - - - - - - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
92. itgb1b.2 ENSDARG00000022689 523 0.986 - 0.986 - - - - - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
93. olfml3b ENSDARG00000062171 264 0.986 - 0.986 - - - - - - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
94. zgc:174275 ENSDARG00000099845 172 0.986 - 0.986 - - - - - - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
95. qtrtd1 243 0.985 - 0.985 - - - - - - - queuine tRNA-ribosyltransferase domain containing 1, transcript variant X1
96. C20H6orf58_1 C20H6orf58_1 216 0.984 - 0.984 - - - - - - -
97. skiv2l ENSDARG00000062206 268 0.984 - 0.984 - - - - - - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
98. WNT7A WNT7A 320 0.984 - 0.984 - - - - - - -
99. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 0.983 - 0.983 - - - - - - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
100. fbxo25 ENSDARG00000075172 153 0.983 - 0.983 - - - - - - - F-box protein 25 [Source:ZFIN;Acc:ZDB-GENE-040801-19]

There are 615 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA