Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cgrrf1

Gene Name Gene ID Reads Annotation
cgrrf1 ENSDARG00000037040, ENSDARG00000109850, ENSDARG00000110308 50 cell growth regulator with ring finger domain 1 [Source:ZFIN;Acc:ZDB-GENE-040724-100]










Genes with expression patterns similar to cgrrf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cgrrf1 ENSDARG00000037040, ENSDARG00000109850, ENSDARG00000110308 50 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cell growth regulator with ring finger domain 1 [Source:ZFIN;Acc:ZDB-GENE-040724-100]
2. stc1l ENSDARG00000058476 512 2.332 - 0.821 - - - 0.770 0.741 - - stanniocalcin 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1521]
3. CSGALNACT1 CSGALNACT1 116 2.222 0.707 0.782 0.733 - - - - - -
4. CABZ01072557.1 CABZ01072557.1 9 2 1.000 - - - - - 1.000 - -
5. SLC9A3R2_1 SLC9A3R2_1 28 1.929 1.000 - - - 0.929 - - - -
6. robo1 ENSDARG00000026784 125 1.887 - 0.887 - - - - 1.000 - - roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-3]
7. LRRC41 LRRC41 11 1.874 - 0.874 - - - - 1.000 - -
8. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 1.848 1.000 - - - - - 0.848 - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
9. RP1L1 RP1L1 15 1.827 - - - - 0.873 - 0.954 - -
10. si:dkey-240h12.3 ENSDARG00000095458 7 1.811 - 0.875 - - 0.936 - - - - si:dkey-240h12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-405]
11. si:dkey-4i23.7 si:dkey-4i23.7 19 1.8 - - 0.800 - - - 1.000 - -
12. si:dkey-91f15.8 18 1.764 - - 0.764 - - - 1.000 - - si:dkey-91f15.8, transcript variant X1
13. slitrk2 ENSDARG00000006636 40 1.753 0.919 - - - 0.834 - - - - SLIT and NTRK-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-080327-7]
14. CU856140.1 CU856140.1 4316 1.746 - - - - - 0.746 1.000 - -
15. OMA1 ENSDARG00000090503 19 1.717 - 0.717 - - - - 1.000 - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
16. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1.713 1.000 - - - - - 0.713 - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
17. si:dkey-157g20.2 si:dkey-157g20.2 29 1.692 - 0.808 - - 0.884 - - - -
18. CDH16 ENSDARG00000077570 78 1.689 - - - - - 0.795 0.894 - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
19. SGSM2 ENSDARG00000063307, ENSDARG00000110752 150 1.674 - 0.869 - - - - 0.805 - - small G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-131119-52]
20. tnmd ENSDARG00000052615 42 1.655 0.751 0.904 - - - - - - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
21. SNAP23_1 SNAP23_1 613 1.645 - 0.937 - - 0.708 - - - -
22. neu3.3 ENSDARG00000058327, ENSDARG00000114607 23 1.642 - 0.876 - - 0.766 - - - - sialidase 3 (membrane sialidase), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-061103-511]
23. ucn3l ENSDARG00000087241 29 1.63 - - 0.870 - 0.760 - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
24. zeb1a ENSDARG00000016788 48 1.626 - 0.906 - - 0.720 - - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
25. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.614 - 0.872 - - - 0.742 - - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
26. fgf11b ENSDARG00000043907 16 1.613 - 0.900 - - - - 0.713 - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
27. herc3 ENSDARG00000075887 41 1.613 - 0.900 - - - - 0.713 - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
28. ftr23 ENSDARG00000067985 254 1.583 0.850 - 0.733 - - - - - - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
29. COL23A1 COL23A1 461 1.566 - 0.831 - - - 0.735 - - -
30. FP017194.1 FP017194.1 52 1.565 - - 0.841 - - - 0.724 - -
31. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 1.563 - 0.821 0.742 - - - - - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
32. avpr1b avpr1b 58 1.547 - - - - 0.834 - 0.713 - -
33. KIF9 ENSDARG00000031693 11 1.516 - - - - - 0.786 0.730 - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
34. stmn4 ENSDARG00000030106 518 1.487 - 0.716 - - - - 0.771 - - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
35. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1.464 0.751 - - - - - 0.713 - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
36. haus6 ENSDARG00000101652 336 1.445 - 0.734 - - - 0.711 - - - HAUS augmin-like complex, subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5517]
37. AC024175.11 AC024175.11 12 1.414 - - - - 0.701 - 0.713 - -
38. ros1 ENSDARG00000087197 9 1 - - - - - - 1.000 - - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
39. ZNF407 ENSDARG00000087536 6 1 1.000 - - - - - - - - zinc finger protein 407 [Source:ZFIN;Acc:ZDB-GENE-110411-123]
40. klhl32 ENSDARG00000003576 99 1 1.000 - - - - - - - - kelch-like family member 32 [Source:ZFIN;Acc:ZDB-GENE-070209-47]
41. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
42. CU855899.1 CU855899.1 2 1 - - - - - - 1.000 - -
43. si:dkey-27j5.5 ENSDARG00000026383 6 1 - - - - - - 1.000 - - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
44. si:dkey-54f18.2 si:dkey-54f18.2 27 1 1.000 - - - - - - - -
45. cryba1l1 ENSDARG00000032929 1868 1 - - - - - - 1.000 - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
46. C1S_1 C1S_1 11 1 1.000 - - - - - - - -
47. CR847906.1 ENSDARG00000099493 88 1 1.000 - - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
48. cd8a ENSDARG00000044797 7 1 - - - - - - 1.000 - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]
49. BX664622.2 BX664622.2 1 1 - - - - - - 1.000 - -
50. 5S_rRNA_25 5S_rRNA_25 0 1 - - - - - - 1.000 - -
51. si:dkey-9i5.4 si:dkey-9i5.4 14 1 - - - - - - 1.000 - -
52. hydin ENSDARG00000056764, ENSDARG00000114934 16 1 - - - - - - 1.000 - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
53. tagapa ENSDARG00000002353 20 1 - - - - - - 1.000 - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
54. prox1b ENSDARG00000088810, ENSDARG00000113014 33 1 - - - - - - 1.000 - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
55. slc15a4 ENSDARG00000102612 1096 1 1.000 - - - - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
56. KRT18_1 KRT18_1 17 1 1.000 - - - - - - - -
57. zgc:158856 zgc:158856 23 1 - - - - - - 1.000 - -
58. si:dkey-26g8.5 ENSDARG00000089750 7070 1 - - - - - - 1.000 - - si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
59. pde5ab ENSDARG00000051915 18 1 - - - - - - 1.000 - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
60. ccdc41 ccdc41 97 1 - - - - - - 1.000 - -
61. cdhr1a ENSDARG00000004643 7 1 - - - - - - 1.000 - - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
62. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 1 1.000 - - - - - - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
63. cep68 ENSDARG00000039411 30 1 1.000 - - - - - - - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
64. ZBTB42 ENSDARG00000102761 2 1 1.000 - - - - - - - - zinc finger and BTB domain containing 42 [Source:ZFIN;Acc:ZDB-GENE-130730-2]
65. abcb4 ENSDARG00000010936 20 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:ZFIN;Acc:ZDB-GENE-080204-52]
66. rbbp9 ENSDARG00000040713 12 1 - - - - - - 1.000 - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
67. CR936371.2 ENSDARG00000117302 2 1 1.000 - - - - - - - -
68. RNF214_1 RNF214_1 5 1 1.000 - - - - - - - -
69. SLC35A3_1 SLC35A3_1 35 1 1.000 - - - - - - - -
70. man2a1 ENSDARG00000102200 12 1 - - - - - - 1.000 - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
71. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 1.000 - - - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
72. CR356223.1 ENSDARG00000093865 1 1 - - - - - - 1.000 - -
73. rgs9a ENSDARG00000037925 3 1 1.000 - - - - - - - - regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
74. si:dkey-125h23.1 si:dkey-125h23.1 23 1 - - - - - - 1.000 - -
75. CABZ01072037.1 CABZ01072037.1 2 1 1.000 - - - - - - - -
76. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - - 1.000 - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
77. ccdc129 37 1 1.000 - - - - - - - - coiled-coil domain containing 129, transcript variant X2
78. AL935293.1 AL935293.1 2 1 1.000 - - - - - - - -
79. mir15a-1 36 1 - - - - - - 1.000 - - microRNA 15a-1
80. si:ch211-190k17.19 ENSDARG00000095756 19 1 - - - - - - 1.000 - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
81. MSH4 ENSDARG00000075826 37 1 1.000 - - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
82. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - - - 1.000 - -
83. PSMB11_1 PSMB11_1 2 1 - - - - - - 1.000 - -
84. SUSD1 ENSDARG00000058839 4 1 - - - - - - 1.000 - - sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
85. si:ch211-202n12.5 si:ch211-202n12.5 19 1 1.000 - - - - - - - -
86. plce1 ENSDARG00000087921 44 1 - - - - - - 1.000 - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
87. FOXL2 239 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
88. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 - - - - - - 1.000 - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
89. tmprss13a ENSDARG00000100969 84 1 1.000 - - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
90. podn ENSDARG00000019025, ENSDARG00000113615 1 1 1.000 - - - - - - - - podocan [Source:ZFIN;Acc:ZDB-GENE-100922-117]
91. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - - 1.000 - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
92. cdk4 ENSDARG00000087937 80 1 - - - - - 1.000 - - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
93. si:dkey-37m8.8 si:dkey-37m8.8 1 1 - - - - - - 1.000 - -
94. si:dkey-157e10.7 si:dkey-157e10.7 105 1 - - - - - - 1.000 - -
95. si:ch211-260b17.6 32 1 1.000 - - - - - - - - si:ch211-260b17.6
96. KLHL10 KLHL10 1 1 - - - - - - 1.000 - -
97. TNFRSF14 TNFRSF14 330 1 - - - - - - 1.000 - -
98. RNF122 RNF122 29 1 1.000 - - - - - - - -
99. TRIM35_5 TRIM35_5 1 1 - - - - - - 1.000 - -
100. pvalb5 ENSDARG00000032836 242 1 1.000 - - - - - - - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]

There are 989 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA