Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdx1b

Gene Name Gene ID Reads Annotation
cdx1b ENSDARG00000116139 113 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]










Genes with expression patterns similar to cdx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdx1b ENSDARG00000116139 113 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
2. ca9 ENSDARG00000102300 193 2.408 - - - - - - 0.823 0.813 0.772 carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
3. MSRA ENSDARG00000029587 30 1.867 - 1.000 - - - - 0.867 - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
4. si:dkey-3d4.1 si:dkey-3d4.1 37 1.861 - 1.000 - - - - 0.861 - -
5. fam175b fam175b 37 1.806 - 1.000 - - 0.806 - - - -
6. lzts1 ENSDARG00000075565 23 1.787 - 1.000 - - 0.787 - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
7. c3c c3c 174 1.726 - 1.000 - - - - - 0.726 -
8. cldn15la ENSDARG00000016081 197 1.666 - - - - - 0.747 0.919 - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
9. ccdc78 ENSDARG00000030095 8 1.646 - - - 0.816 0.830 - - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
10. wu:fb59d01 ENSDARG00000089361 171 1.622 - - - - - 0.749 0.873 - - wu:fb59d01 [Source:ZFIN;Acc:ZDB-GENE-030131-1098]
11. olfm3a ENSDARG00000071493, ENSDARG00000110039 46 1.594 - - - 0.768 0.826 - - - - olfactomedin 3a [Source:ZFIN;Acc:ZDB-GENE-080219-11]
12. wdr19 ENSDARG00000037406 98 1.564 - 0.809 - - - - 0.755 - - WD repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-090313-277]
13. tmem88b ENSDARG00000069388 501 1.56 - - - - - 0.720 0.840 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
14. GPR119 GPR119 41 1.555 - - - 0.779 - - 0.776 - -
15. enpp6 ENSDARG00000040469 187 1.547 - - - - 0.715 - 0.832 - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
16. wrnip1 ENSDARG00000005218 695 1.543 - 0.819 - - - - 0.724 - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
17. cish ENSDARG00000060316 329 1.53 - - - - - 0.744 0.786 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
18. cpa2 ENSDARG00000010146 28 1.529 - - - - 0.742 - - 0.787 - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
19. si:dkey-220o21.5 si:dkey-220o21.5 24 1.518 - - - 0.729 - - - 0.789 -
20. ncf1 ENSDARG00000033735 83 1.504 - - - - - - 0.773 0.731 - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
21. HMGXB4_1 HMGXB4_1 1122 1.496 - - - - - 0.702 - 0.794 -
22. BAI1_1 BAI1_1 57 1.453 - 0.704 - - - - - 0.749 -
23. syt12 ENSDARG00000101776 215 1.445 - 0.713 - - - - - 0.732 - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
24. bicc2 ENSDARG00000076557 77 1.426 - 0.704 - - - - - 0.722 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
25. btbd3b ENSDARG00000087517 107 1 - 1.000 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
26. ca5 ca5 1 1 - 1.000 - - - - - - -
27. PGBD4 ENSDARG00000079328 20 1 - 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
28. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - 1.000 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
29. pcsk5a ENSDARG00000067537 44 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
30. si:dkey-242g16.2 ENSDARG00000069377 7 1 - 1.000 - - - - - - - si:dkey-242g16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8324]
31. arhgef3 ENSDARG00000013834 3 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
32. SERINC3 SERINC3 21 1 - 1.000 - - - - - - -
33. rs1 rs1 70 1 - 1.000 - - - - - - -
34. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - 1.000 - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
35. CABZ01088718.1 CABZ01088718.1 1 1 - 1.000 - - - - - - -
36. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
37. ZP2_3 ZP2_3 2 1 - 1.000 - - - - - - -
38. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1 - 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
39. tmeff2b ENSDARG00000058699 82 1 - 1.000 - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
40. CR318593.1_1 CR318593.1_1 8 1 - 1.000 - - - - - - -
41. si:dkeyp-33c10.5 11 1 - 1.000 - - - - - - - si:dkeyp-33c10.5, transcript variant X2
42. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - 1.000 - - - - - - -
43. slc12a5b ENSDARG00000078187 329 1 - 1.000 - - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
44. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
45. TULP2 TULP2 38 1 - 1.000 - - - - - - -
46. LGALS8_1 LGALS8_1 29 1 - 1.000 - - - - - - -
47. si:ch211-173p18.3_1 ENSDARG00000035821 36 1 - 1.000 - - - - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
48. SGSM1 SGSM1 254 1 - 1.000 - - - - - - -
49. arl8 ENSDARG00000094709 6 1 - 1.000 - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
50. RGS9BP ENSDARG00000086756 65 1 - 1.000 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
51. CABZ01089980.1 ENSDARG00000117446 16 1 - 1.000 - - - - - - -
52. gphnb ENSDARG00000100851 118 1 - 1.000 - - - - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
53. tnfaip8l2a ENSDARG00000075592 90 1 - 1.000 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
54. DNAJC14 ENSDARG00000105398 20 1 - 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
55. GADD45G GADD45G 382 1 - 1.000 - - - - - - -
56. necab1 ENSDARG00000056566, ENSDARG00000111028 26 1 - 1.000 - - - - - - - N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
57. tcf23 ENSDARG00000087381 6 1 - 1.000 - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
58. atat1 ENSDARG00000004472 700 1 - 1.000 - - - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
59. SACS ENSDARG00000091042 15 1 - 1.000 - - - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
60. Mar-09 Mar-09 126 1 - 1.000 - - - - - - -
61. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
62. si:dkey-187i8.2 ENSDARG00000096624 8 1 - 1.000 - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
63. kcnj14 ENSDARG00000075914 38 1 - 1.000 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
64. gpr22 gpr22 115 1 - 1.000 - - - - - - -
65. CR847504.1 ENSDARG00000102515 29 1 - 1.000 - - - - - - -
66. si:ch211-255a21.4 si:ch211-255a21.4 26 1 - 1.000 - - - - - - -
67. BX470224.1 ENSDARG00000092793 22 1 - 1.000 - - - - - - -
68. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - 1.000 - - - - - - -
69. CU855821.2 CU855821.2 21 1 - 1.000 - - - - - - -
70. foxg1d ENSDARG00000070053 32 1 - 1.000 - - - - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
71. PARP6 PARP6 119 1 - 1.000 - - - - - - -
72. BX936303.1 ENSDARG00000103105 26 1 - 1.000 - - - - - - -
73. KCNJ6 ENSDARG00000058985 71 1 - 1.000 - - - - - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
74. crygm2d10 ENSDARG00000087765 358 1 - 1.000 - - - - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
75. PPFIA3 ENSDARG00000077053 310 1 - 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
76. AC024175.21 AC024175.21 10 1 - 1.000 - - - - - - -
77. NACC1 NACC1 9 1 - 1.000 - - - - - - -
78. CT030048.2 CT030048.2 3 1 - 1.000 - - - - - - -
79. WNK3 WNK3 36 1 - 1.000 - - - - - - -
80. CR556708.1 ENSDARG00000100565 6 1 - 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
81. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
82. si:dkey-273g18.1_1 ENSDARG00000097405, ENSDARG00000105439 5 1 - 1.000 - - - - - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
83. TENM2 ENSDARG00000037122 48 1 - 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
84. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - 1.000 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
85. CABZ01074423.1 CABZ01074423.1 8 1 - 1.000 - - - - - - -
86. zmiz2 ENSDARG00000098683 1 1 - 1.000 - - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]
87. CT867973.1 ENSDARG00000114801 13 1 - 1.000 - - - - - - -
88. si:ch73-269g14.1 si:ch73-269g14.1 0 1 - 1.000 - - - - - - -
89. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - 1.000 - - - - - - -
90. zgc:171445 ENSDARG00000115205 3 1 - 1.000 - - - - - - - zgc:171445 [Source:ZFIN;Acc:ZDB-GENE-080205-2]
91. bsk146 ENSDARG00000099069 274 1 - 1.000 - - - - - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
92. grm2a ENSDARG00000004150 64 1 - 1.000 - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
93. rnf213b ENSDARG00000103551 63 1 - 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
94. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 - 1.000 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
95. mir92b 95 1 - 1.000 - - - - - - - microRNA 92b
96. lppr5b lppr5b 23 1 - 1.000 - - - - - - -
97. CABZ01055343.1 CABZ01055343.1 12 1 - 1.000 - - - - - - -
98. si:dkey-218i12.3 si:dkey-218i12.3 4 1 - 1.000 - - - - - - -
99. mocs1 ENSDARG00000078479 1 1 - 1.000 - - - - - - - molybdenum cofactor synthesis 1 [Source:ZFIN;Acc:ZDB-GENE-130215-1]
100. CCDC50_1 CCDC50_1 1 1 - 1.000 - - - - - - -

There are 1069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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