Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdx1b

Gene Name Gene ID Reads Annotation
cdx1b ENSDARG00000116139 113 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]










Genes with expression patterns similar to cdx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdx1b ENSDARG00000116139 113 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
2. ca9 ENSDARG00000102300 193 2.408 - - - - - - 0.823 0.813 0.772 carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
3. MSRA ENSDARG00000029587 30 1.867 - 1.000 - - - - 0.867 - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
4. si:dkey-3d4.1 si:dkey-3d4.1 37 1.861 - 1.000 - - - - 0.861 - -
5. fam175b fam175b 37 1.806 - 1.000 - - 0.806 - - - -
6. lzts1 ENSDARG00000075565 23 1.787 - 1.000 - - 0.787 - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
7. c3c c3c 174 1.726 - 1.000 - - - - - 0.726 -
8. cldn15la ENSDARG00000016081 197 1.666 - - - - - 0.747 0.919 - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
9. ccdc78 ENSDARG00000030095 8 1.646 - - - 0.816 0.830 - - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
10. wu:fb59d01 ENSDARG00000089361 171 1.622 - - - - - 0.749 0.873 - - wu:fb59d01 [Source:ZFIN;Acc:ZDB-GENE-030131-1098]
11. olfm3a ENSDARG00000071493, ENSDARG00000110039 46 1.594 - - - 0.768 0.826 - - - - olfactomedin 3a [Source:ZFIN;Acc:ZDB-GENE-080219-11]
12. wdr19 ENSDARG00000037406 98 1.564 - 0.809 - - - - 0.755 - - WD repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-090313-277]
13. tmem88b ENSDARG00000069388 501 1.56 - - - - - 0.720 0.840 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
14. GPR119 GPR119 41 1.555 - - - 0.779 - - 0.776 - -
15. enpp6 ENSDARG00000040469 187 1.547 - - - - 0.715 - 0.832 - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
16. wrnip1 ENSDARG00000005218 695 1.543 - 0.819 - - - - 0.724 - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
17. cish ENSDARG00000060316 329 1.53 - - - - - 0.744 0.786 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
18. cpa2 ENSDARG00000010146 28 1.529 - - - - 0.742 - - 0.787 - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
19. si:dkey-220o21.5 si:dkey-220o21.5 24 1.518 - - - 0.729 - - - 0.789 -
20. ncf1 ENSDARG00000033735 83 1.504 - - - - - - 0.773 0.731 - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
21. HMGXB4_1 HMGXB4_1 1122 1.496 - - - - - 0.702 - 0.794 -
22. BAI1_1 BAI1_1 57 1.453 - 0.704 - - - - - 0.749 -
23. syt12 ENSDARG00000101776 215 1.445 - 0.713 - - - - - 0.732 - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
24. bicc2 ENSDARG00000076557 77 1.426 - 0.704 - - - - - 0.722 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
25. si:ch211-237c9.3 si:ch211-237c9.3 17 1 - 1.000 - - - - - - -
26. CMA1_11 CMA1_11 0 1 - 1.000 - - - - - - -
27. si:ch211-57f7.7 ENSDARG00000093131 8 1 - 1.000 - - - - - - - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
28. CT955987.1 CT955987.1 9 1 - 1.000 - - - - - - -
29. CU694254.1 CU694254.1 4 1 - 1.000 - - - - - - -
30. cbx7b ENSDARG00000087181 5 1 - 1.000 - - - - - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
31. sult3st1 ENSDARG00000009885 218 1 - 1.000 - - - - - - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
32. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
33. ARX ARX 71 1 - 1.000 - - - - - - -
34. foxg1d ENSDARG00000070053 32 1 - 1.000 - - - - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
35. KCNA2 KCNA2 66 1 - 1.000 - - - - - - -
36. si:ch73-290k24.5 ENSDARG00000076310 39 1 - 1.000 - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
37. si:dkey-247i3.1 ENSDARG00000076252 11 1 - 1.000 - - - - - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
38. ftr76 ENSDARG00000076093 1 1 - 1.000 - - - - - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
39. slc2a15b ENSDARG00000053269 899 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
40. selp ENSDARG00000042138, ENSDARG00000096787 3 1 - 1.000 - - - - - - - selectin P [Source:ZFIN;Acc:ZDB-GENE-110107-2]
41. ppp1r3db ENSDARG00000076248 32 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
42. NRSN2 NRSN2 57 1 - 1.000 - - - - - - -
43. dusp3b ENSDARG00000060130 3 1 - 1.000 - - - - - - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
44. CABZ01065506.1 CABZ01065506.1 204 1 - 1.000 - - - - - - -
45. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 - 1.000 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
46. rtn4rl2a ENSDARG00000052012 5 1 - 1.000 - - - - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
47. spred3 ENSDARG00000040358 134 1 - 1.000 - - - - - - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
48. ZP2_3 ZP2_3 2 1 - 1.000 - - - - - - -
49. si:dkey-103i16.2 si:dkey-103i16.2 492 1 - 1.000 - - - - - - -
50. calml4a ENSDARG00000075800 14 1 - 1.000 - - - - - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
51. grm2a ENSDARG00000004150 64 1 - 1.000 - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
52. panx3 ENSDARG00000004627 7 1 - 1.000 - - - - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
53. U1_8 U1_8 1 1 - 1.000 - - - - - - -
54. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 - 1.000 - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
55. BX511189.1 BX511189.1 34 1 - 1.000 - - - - - - -
56. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
57. fabp10a ENSDARG00000038439 4 1 - 1.000 - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
58. si:dkey-11c5.14 si:dkey-11c5.14 15 1 - 1.000 - - - - - - -
59. crygm2d10 ENSDARG00000087765 358 1 - 1.000 - - - - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
60. arl8 ENSDARG00000094709 6 1 - 1.000 - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
61. gphnb ENSDARG00000100851 118 1 - 1.000 - - - - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
62. si:dkeyp-85d8.3 si:dkeyp-85d8.3 0 1 - 1.000 - - - - - - -
63. kcnj14 ENSDARG00000075914 38 1 - 1.000 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
64. CT573494.2 CT573494.2 58 1 - 1.000 - - - - - - -
65. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
66. EPM2AIP1 EPM2AIP1 4 1 - 1.000 - - - - - - -
67. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
68. bcl11ba ENSDARG00000062510 169 1 - 1.000 - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
69. CABZ01085177.1 ENSDARG00000104644 6 1 - 1.000 - - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
70. Mar-09 Mar-09 126 1 - 1.000 - - - - - - -
71. GRAMD3 GRAMD3 4 1 - 1.000 - - - - - - -
72. PEG3_36 PEG3_36 3 1 - 1.000 - - - - - - -
73. si:dkey-21o19.6 si:dkey-21o19.6 18 1 - 1.000 - - - - - - -
74. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
75. NACC1 NACC1 9 1 - 1.000 - - - - - - -
76. bsk146 ENSDARG00000099069 274 1 - 1.000 - - - - - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
77. MOV10L1 MOV10L1 21 1 - 1.000 - - - - - - -
78. btbd3b ENSDARG00000087517 107 1 - 1.000 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
79. vat1l ENSDARG00000101280 1 1 - 1.000 - - - - - - - vesicle amine transport 1-like [Source:ZFIN;Acc:ZDB-GENE-080204-21]
80. slc12a5b ENSDARG00000078187 329 1 - 1.000 - - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
81. si:dkey-242g16.2 ENSDARG00000069377 7 1 - 1.000 - - - - - - - si:dkey-242g16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8324]
82. pag1 ENSDARG00000055875 21 1 - 1.000 - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
83. zgc:174153 ENSDARG00000079376 12007 1 - 1.000 - - - - - - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
84. pappab ENSDARG00000059858 11 1 - 1.000 - - - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
85. dharma ENSDARG00000040955 0 1 - 1.000 - - - - - - - dharma [Source:ZFIN;Acc:ZDB-GENE-990415-22]
86. DNAJC14 ENSDARG00000105398 20 1 - 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
87. hspb3 ENSDARG00000067714, ENSDARG00000116486 83 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b3 [Source:ZFIN;Acc:ZDB-GENE-070705-338]
88. GRIK1 GRIK1 1 1 - 1.000 - - - - - - -
89. mettl11b ENSDARG00000042033 176 1 - 1.000 - - - - - - - methyltransferase like 11B [Source:ZFIN;Acc:ZDB-GENE-081104-175]
90. gpr88 24 1 - 1.000 - - - - - - - G protein-coupled receptor 88
91. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - 1.000 - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
92. SGSM1 SGSM1 254 1 - 1.000 - - - - - - -
93. gpr22 gpr22 115 1 - 1.000 - - - - - - -
94. si:ch211-173p18.3_1 ENSDARG00000035821 36 1 - 1.000 - - - - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
95. necab1 ENSDARG00000056566, ENSDARG00000111028 26 1 - 1.000 - - - - - - - N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
96. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 1 - 1.000 - - - - - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
97. BX936303.1 ENSDARG00000103105 26 1 - 1.000 - - - - - - -
98. CT867973.1 ENSDARG00000114801 13 1 - 1.000 - - - - - - -
99. rab14l ENSDARG00000035188 18 1 - 1.000 - - - - - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
100. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - 1.000 - - - - - - -

There are 1069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA