Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdx1b

Gene Name Gene ID Reads Annotation
cdx1b ENSDARG00000116139 113 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]










Genes with expression patterns similar to cdx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdx1b ENSDARG00000116139 113 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
2. ca9 ENSDARG00000102300 193 2.408 - - - - - - 0.823 0.813 0.772 carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
3. MSRA ENSDARG00000029587 30 1.867 - 1.000 - - - - 0.867 - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
4. si:dkey-3d4.1 si:dkey-3d4.1 37 1.861 - 1.000 - - - - 0.861 - -
5. fam175b fam175b 37 1.806 - 1.000 - - 0.806 - - - -
6. lzts1 ENSDARG00000075565 23 1.787 - 1.000 - - 0.787 - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
7. c3c c3c 174 1.726 - 1.000 - - - - - 0.726 -
8. cldn15la ENSDARG00000016081 197 1.666 - - - - - 0.747 0.919 - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
9. ccdc78 ENSDARG00000030095 8 1.646 - - - 0.816 0.830 - - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
10. wu:fb59d01 ENSDARG00000089361 171 1.622 - - - - - 0.749 0.873 - - wu:fb59d01 [Source:ZFIN;Acc:ZDB-GENE-030131-1098]
11. olfm3a ENSDARG00000071493, ENSDARG00000110039 46 1.594 - - - 0.768 0.826 - - - - olfactomedin 3a [Source:ZFIN;Acc:ZDB-GENE-080219-11]
12. wdr19 ENSDARG00000037406 98 1.564 - 0.809 - - - - 0.755 - - WD repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-090313-277]
13. tmem88b ENSDARG00000069388 501 1.56 - - - - - 0.720 0.840 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
14. GPR119 GPR119 41 1.555 - - - 0.779 - - 0.776 - -
15. enpp6 ENSDARG00000040469 187 1.547 - - - - 0.715 - 0.832 - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
16. wrnip1 ENSDARG00000005218 695 1.543 - 0.819 - - - - 0.724 - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
17. cish ENSDARG00000060316 329 1.53 - - - - - 0.744 0.786 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
18. cpa2 ENSDARG00000010146 28 1.529 - - - - 0.742 - - 0.787 - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
19. si:dkey-220o21.5 si:dkey-220o21.5 24 1.518 - - - 0.729 - - - 0.789 -
20. ncf1 ENSDARG00000033735 83 1.504 - - - - - - 0.773 0.731 - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
21. HMGXB4_1 HMGXB4_1 1122 1.496 - - - - - 0.702 - 0.794 -
22. BAI1_1 BAI1_1 57 1.453 - 0.704 - - - - - 0.749 -
23. syt12 ENSDARG00000101776 215 1.445 - 0.713 - - - - - 0.732 - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
24. bicc2 ENSDARG00000076557 77 1.426 - 0.704 - - - - - 0.722 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
25. zgc:92137 ENSDARG00000009443 0 1 - 1.000 - - - - - - - zgc:92137 [Source:ZFIN;Acc:ZDB-GENE-040801-179]
26. cbx7b ENSDARG00000087181 5 1 - 1.000 - - - - - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
27. cldnj ENSDARG00000058880 59 1 - 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
28. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
29. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
30. si:dkey-31e10.5 ENSDARG00000070502 4 1 - 1.000 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
31. RGS9BP ENSDARG00000086756 65 1 - 1.000 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
32. MOV10L1 MOV10L1 21 1 - 1.000 - - - - - - -
33. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
34. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 - 1.000 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
35. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
36. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
37. gpr88 24 1 - 1.000 - - - - - - - G protein-coupled receptor 88
38. zgc:171445 ENSDARG00000115205 3 1 - 1.000 - - - - - - - zgc:171445 [Source:ZFIN;Acc:ZDB-GENE-080205-2]
39. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
40. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
41. atat1 ENSDARG00000004472 700 1 - 1.000 - - - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
42. BX511189.1 BX511189.1 34 1 - 1.000 - - - - - - -
43. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1 - 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
44. faim2a ENSDARG00000038784 39 1 - 1.000 - - - - - - - Fas apoptotic inhibitory molecule 2a [Source:ZFIN;Acc:ZDB-GENE-050320-88]
45. sprn ENSDARG00000056004 128 1 - 1.000 - - - - - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
46. eif2b5 ENSDARG00000074995 8 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
47. CABZ01074423.1 CABZ01074423.1 8 1 - 1.000 - - - - - - -
48. hes2.2 ENSDARG00000068168 197 1 - 1.000 - - - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
49. aldh1a3 ENSDARG00000076933 95 1 - 1.000 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
50. si:ch211-214p13.3 ENSDARG00000087403 0 1 - 1.000 - - - - - - - si:ch211-214p13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-779]
51. Mar-09 Mar-09 126 1 - 1.000 - - - - - - -
52. rhobtb2b ENSDARG00000089340 4 1 - 1.000 - - - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
53. ccdc64 ccdc64 2 1 - 1.000 - - - - - - -
54. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
55. CT030048.2 CT030048.2 3 1 - 1.000 - - - - - - -
56. pag1 ENSDARG00000055875 21 1 - 1.000 - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
57. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
58. BX649497.1 BX649497.1 0 1 - 1.000 - - - - - - -
59. smcr8b ENSDARG00000015803 3 1 - 1.000 - - - - - - - Smith-Magenis syndrome chromosome region, candidate 8b [Source:ZFIN;Acc:ZDB-GENE-061122-1]
60. U1_8 U1_8 1 1 - 1.000 - - - - - - -
61. ME1 ENSDARG00000053215 8 1 - 1.000 - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
62. grm2a ENSDARG00000004150 64 1 - 1.000 - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
63. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1 - 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
64. SGSM1 SGSM1 254 1 - 1.000 - - - - - - -
65. sgms2 57 1 - 1.000 - - - - - - - sphingomyelin synthase 2, transcript variant X1
66. CU855821.2 CU855821.2 21 1 - 1.000 - - - - - - -
67. BX936303.1 ENSDARG00000103105 26 1 - 1.000 - - - - - - -
68. CR318593.1_1 CR318593.1_1 8 1 - 1.000 - - - - - - -
69. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
70. GADD45G GADD45G 382 1 - 1.000 - - - - - - -
71. rnf213b ENSDARG00000103551 63 1 - 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
72. CT573494.2 CT573494.2 58 1 - 1.000 - - - - - - -
73. vat1l ENSDARG00000101280 1 1 - 1.000 - - - - - - - vesicle amine transport 1-like [Source:ZFIN;Acc:ZDB-GENE-080204-21]
74. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1 - 1.000 - - - - - - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
75. CT867973.1 ENSDARG00000114801 13 1 - 1.000 - - - - - - -
76. PGBD4_5 PGBD4_5 16 1 - 1.000 - - - - - - -
77. PPFIA3 ENSDARG00000077053 310 1 - 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
78. zdhhc18a ENSDARG00000069807 8 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
79. GRAMD3 GRAMD3 4 1 - 1.000 - - - - - - -
80. CABZ01038313.1 CABZ01038313.1 79 1 - 1.000 - - - - - - -
81. fabp10a ENSDARG00000038439 4 1 - 1.000 - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
82. pappa2 ENSDARG00000076020 89 1 - 1.000 - - - - - - - pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
83. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - 1.000 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
84. CR847906.1 ENSDARG00000099493 88 1 - 1.000 - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
85. CABZ01065506.1 CABZ01065506.1 204 1 - 1.000 - - - - - - -
86. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1 - 1.000 - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
87. pappab ENSDARG00000059858 11 1 - 1.000 - - - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
88. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
89. si:dkey-157g16.6 ENSDARG00000057062 12 1 - 1.000 - - - - - - - si:dkey-157g16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-189]
90. btbd3b ENSDARG00000087517 107 1 - 1.000 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
91. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 - 1.000 - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
92. mir92b 95 1 - 1.000 - - - - - - - microRNA 92b
93. kcnj14 ENSDARG00000075914 38 1 - 1.000 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
94. bcl11ba ENSDARG00000062510 169 1 - 1.000 - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
95. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
96. gdf10a ENSDARG00000095378 12 1 - 1.000 - - - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
97. si:dkey-247i3.1 ENSDARG00000076252 11 1 - 1.000 - - - - - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
98. ARX ARX 71 1 - 1.000 - - - - - - -
99. mocs1 ENSDARG00000078479 1 1 - 1.000 - - - - - - - molybdenum cofactor synthesis 1 [Source:ZFIN;Acc:ZDB-GENE-130215-1]
100. TULP2 TULP2 38 1 - 1.000 - - - - - - -

There are 1069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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