Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdx1b

Gene Name Gene ID Reads Annotation
cdx1b ENSDARG00000116139 113 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]










Genes with expression patterns similar to cdx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdx1b ENSDARG00000116139 113 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
2. ca9 ENSDARG00000102300 193 2.408 - - - - - - 0.823 0.813 0.772 carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
3. MSRA ENSDARG00000029587 30 1.867 - 1.000 - - - - 0.867 - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
4. si:dkey-3d4.1 si:dkey-3d4.1 37 1.861 - 1.000 - - - - 0.861 - -
5. fam175b fam175b 37 1.806 - 1.000 - - 0.806 - - - -
6. lzts1 ENSDARG00000075565 23 1.787 - 1.000 - - 0.787 - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
7. c3c c3c 174 1.726 - 1.000 - - - - - 0.726 -
8. cldn15la ENSDARG00000016081 197 1.666 - - - - - 0.747 0.919 - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
9. ccdc78 ENSDARG00000030095 8 1.646 - - - 0.816 0.830 - - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
10. wu:fb59d01 ENSDARG00000089361 171 1.622 - - - - - 0.749 0.873 - - wu:fb59d01 [Source:ZFIN;Acc:ZDB-GENE-030131-1098]
11. olfm3a ENSDARG00000071493, ENSDARG00000110039 46 1.594 - - - 0.768 0.826 - - - - olfactomedin 3a [Source:ZFIN;Acc:ZDB-GENE-080219-11]
12. wdr19 ENSDARG00000037406 98 1.564 - 0.809 - - - - 0.755 - - WD repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-090313-277]
13. tmem88b ENSDARG00000069388 501 1.56 - - - - - 0.720 0.840 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
14. GPR119 GPR119 41 1.555 - - - 0.779 - - 0.776 - -
15. enpp6 ENSDARG00000040469 187 1.547 - - - - 0.715 - 0.832 - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
16. wrnip1 ENSDARG00000005218 695 1.543 - 0.819 - - - - 0.724 - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
17. cish ENSDARG00000060316 329 1.53 - - - - - 0.744 0.786 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
18. cpa2 ENSDARG00000010146 28 1.529 - - - - 0.742 - - 0.787 - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
19. si:dkey-220o21.5 si:dkey-220o21.5 24 1.518 - - - 0.729 - - - 0.789 -
20. ncf1 ENSDARG00000033735 83 1.504 - - - - - - 0.773 0.731 - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
21. HMGXB4_1 HMGXB4_1 1122 1.496 - - - - - 0.702 - 0.794 -
22. BAI1_1 BAI1_1 57 1.453 - 0.704 - - - - - 0.749 -
23. syt12 ENSDARG00000101776 215 1.445 - 0.713 - - - - - 0.732 - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
24. bicc2 ENSDARG00000076557 77 1.426 - 0.704 - - - - - 0.722 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
25. ftr76 ENSDARG00000076093 1 1 - 1.000 - - - - - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
26. RECK ENSDARG00000090039 15 1 - 1.000 - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
27. si:ch211-113a14.26_3 6 1 - 1.000 - - - - - - - si:ch211-113a14.26
28. si:ch211-255a21.4 si:ch211-255a21.4 26 1 - 1.000 - - - - - - -
29. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
30. lepa ENSDARG00000091085 11 1 - 1.000 - - - - - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
31. cldnj ENSDARG00000058880 59 1 - 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
32. si:dkey-191j3.2 ENSDARG00000101997 1 1 - 1.000 - - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
33. CR847906.1 ENSDARG00000099493 88 1 - 1.000 - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
34. BX000430.1 ENSDARG00000112057 135 1 - 1.000 - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
35. fstl5 ENSDARG00000040198 213 1 - 1.000 - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
36. PGBD4_5 PGBD4_5 16 1 - 1.000 - - - - - - -
37. si:ch73-27e22.7 ENSDARG00000093345 2 1 - 1.000 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
38. si:dkeyp-33c10.5 11 1 - 1.000 - - - - - - - si:dkeyp-33c10.5, transcript variant X2
39. gphnb ENSDARG00000100851 118 1 - 1.000 - - - - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
40. si:dkey-242g16.2 ENSDARG00000069377 7 1 - 1.000 - - - - - - - si:dkey-242g16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8324]
41. PEG3_36 PEG3_36 3 1 - 1.000 - - - - - - -
42. zmiz2 ENSDARG00000098683 1 1 - 1.000 - - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]
43. zgc:77112 ENSDARG00000015657 24 1 - 1.000 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
44. gdf10a ENSDARG00000095378 12 1 - 1.000 - - - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
45. GRIK1 GRIK1 1 1 - 1.000 - - - - - - -
46. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1 - 1.000 - - - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
47. ciz1a ENSDARG00000089781 20 1 - 1.000 - - - - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
48. CR847504.1 ENSDARG00000102515 29 1 - 1.000 - - - - - - -
49. NRSN2 NRSN2 57 1 - 1.000 - - - - - - -
50. slc12a5b ENSDARG00000078187 329 1 - 1.000 - - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
51. eif2b5 ENSDARG00000074995 8 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
52. ZP2_3 ZP2_3 2 1 - 1.000 - - - - - - -
53. nrcam nrcam 397 1 - 1.000 - - - - - - -
54. MOV10L1 MOV10L1 21 1 - 1.000 - - - - - - -
55. CR556708.1 ENSDARG00000100565 6 1 - 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
56. dharma ENSDARG00000040955 0 1 - 1.000 - - - - - - - dharma [Source:ZFIN;Acc:ZDB-GENE-990415-22]
57. BX936303.1 ENSDARG00000103105 26 1 - 1.000 - - - - - - -
58. lppr5b lppr5b 23 1 - 1.000 - - - - - - -
59. PARP6 PARP6 119 1 - 1.000 - - - - - - -
60. SERINC3 SERINC3 21 1 - 1.000 - - - - - - -
61. CU855821.2 CU855821.2 21 1 - 1.000 - - - - - - -
62. CABZ01074423.1 CABZ01074423.1 8 1 - 1.000 - - - - - - -
63. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
64. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - 1.000 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
65. si:dkey-149m13.3 si:dkey-149m13.3 0 1 - 1.000 - - - - - - -
66. faim2a ENSDARG00000038784 39 1 - 1.000 - - - - - - - Fas apoptotic inhibitory molecule 2a [Source:ZFIN;Acc:ZDB-GENE-050320-88]
67. slc2a15b ENSDARG00000053269 899 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
68. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
69. rnf213b ENSDARG00000103551 63 1 - 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
70. rnf207b ENSDARG00000012409, ENSDARG00000116638 139 1 - 1.000 - - - - - - - ring finger protein 207b [Source:ZFIN;Acc:ZDB-GENE-080227-9]
71. mstnb ENSDARG00000069133 3 1 - 1.000 - - - - - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
72. GADD45G GADD45G 382 1 - 1.000 - - - - - - -
73. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1 - 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
74. bcl11ba ENSDARG00000062510 169 1 - 1.000 - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
75. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
76. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
77. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
78. si:ch211-173p18.3_1 ENSDARG00000035821 36 1 - 1.000 - - - - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
79. zgc:195633 19 1 - 1.000 - - - - - - - zgc:195633
80. si:dkey-4j21.1 17 1 - 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
81. PGBD4 ENSDARG00000079328 20 1 - 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
82. l3mbtl3 ENSDARG00000025983 12 1 - 1.000 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
83. CCDC50_1 CCDC50_1 1 1 - 1.000 - - - - - - -
84. XKR7 ENSDARG00000026333 175 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
85. ME1 ENSDARG00000053215 8 1 - 1.000 - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
86. CU928854.1 CU928854.1 3 1 - 1.000 - - - - - - -
87. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - 1.000 - - - - - - -
88. atat1 ENSDARG00000004472 700 1 - 1.000 - - - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
89. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
90. Mar-09 Mar-09 126 1 - 1.000 - - - - - - -
91. nitr3a_1 ENSDARG00000110676 44 1 - 1.000 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
92. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
93. tcf23 ENSDARG00000087381 6 1 - 1.000 - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
94. calml4a ENSDARG00000075800 14 1 - 1.000 - - - - - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
95. BX649415.4 BX649415.4 3 1 - 1.000 - - - - - - -
96. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 - 1.000 - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
97. CT030048.2 CT030048.2 3 1 - 1.000 - - - - - - -
98. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 - 1.000 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
99. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
100. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1 - 1.000 - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]

There are 1069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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