Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdx1b

Gene Name Gene ID Reads Annotation
cdx1b ENSDARG00000116139 113 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]










Genes with expression patterns similar to cdx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdx1b ENSDARG00000116139 113 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
2. ca9 ENSDARG00000102300 193 2.408 - - - - - - 0.823 0.813 0.772 carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
3. MSRA ENSDARG00000029587 30 1.867 - 1.000 - - - - 0.867 - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
4. si:dkey-3d4.1 si:dkey-3d4.1 37 1.861 - 1.000 - - - - 0.861 - -
5. fam175b fam175b 37 1.806 - 1.000 - - 0.806 - - - -
6. lzts1 ENSDARG00000075565 23 1.787 - 1.000 - - 0.787 - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
7. c3c c3c 174 1.726 - 1.000 - - - - - 0.726 -
8. cldn15la ENSDARG00000016081 197 1.666 - - - - - 0.747 0.919 - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
9. ccdc78 ENSDARG00000030095 8 1.646 - - - 0.816 0.830 - - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
10. wu:fb59d01 ENSDARG00000089361 171 1.622 - - - - - 0.749 0.873 - - wu:fb59d01 [Source:ZFIN;Acc:ZDB-GENE-030131-1098]
11. olfm3a ENSDARG00000071493, ENSDARG00000110039 46 1.594 - - - 0.768 0.826 - - - - olfactomedin 3a [Source:ZFIN;Acc:ZDB-GENE-080219-11]
12. wdr19 ENSDARG00000037406 98 1.564 - 0.809 - - - - 0.755 - - WD repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-090313-277]
13. tmem88b ENSDARG00000069388 501 1.56 - - - - - 0.720 0.840 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
14. GPR119 GPR119 41 1.555 - - - 0.779 - - 0.776 - -
15. enpp6 ENSDARG00000040469 187 1.547 - - - - 0.715 - 0.832 - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
16. wrnip1 ENSDARG00000005218 695 1.543 - 0.819 - - - - 0.724 - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
17. cish ENSDARG00000060316 329 1.53 - - - - - 0.744 0.786 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
18. cpa2 ENSDARG00000010146 28 1.529 - - - - 0.742 - - 0.787 - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
19. si:dkey-220o21.5 si:dkey-220o21.5 24 1.518 - - - 0.729 - - - 0.789 -
20. ncf1 ENSDARG00000033735 83 1.504 - - - - - - 0.773 0.731 - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
21. HMGXB4_1 HMGXB4_1 1122 1.496 - - - - - 0.702 - 0.794 -
22. BAI1_1 BAI1_1 57 1.453 - 0.704 - - - - - 0.749 -
23. syt12 ENSDARG00000101776 215 1.445 - 0.713 - - - - - 0.732 - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
24. bicc2 ENSDARG00000076557 77 1.426 - 0.704 - - - - - 0.722 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
25. si:ch211-57f7.7 ENSDARG00000093131 8 1 - 1.000 - - - - - - - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
26. BX000430.1 ENSDARG00000112057 135 1 - 1.000 - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
27. BX649415.4 BX649415.4 3 1 - 1.000 - - - - - - -
28. si:ch73-27e22.7 ENSDARG00000093345 2 1 - 1.000 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
29. thada ENSDARG00000053082, ENSDARG00000112761 2 1 - 1.000 - - - - - - - thyroid adenoma associated [Source:ZFIN;Acc:ZDB-GENE-050320-49]
30. zgc:194665 ENSDARG00000004577 136 1 - 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
31. si:dkey-191j3.2 ENSDARG00000101997 1 1 - 1.000 - - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
32. BX649497.1 BX649497.1 0 1 - 1.000 - - - - - - -
33. CABZ01065506.1 CABZ01065506.1 204 1 - 1.000 - - - - - - -
34. galnt13 ENSDARG00000099227 1059 1 - 1.000 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
35. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - 1.000 - - - - - - -
36. adora1 adora1 149 1 - 1.000 - - - - - - -
37. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
38. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
39. si:dkey-11c5.14 si:dkey-11c5.14 15 1 - 1.000 - - - - - - -
40. si:ch73-290k24.5 ENSDARG00000076310 39 1 - 1.000 - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
41. slc2a15b ENSDARG00000053269 899 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
42. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1 - 1.000 - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
43. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1 - 1.000 - - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
44. vwc2 ENSDARG00000076495 22 1 - 1.000 - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
45. si:dkey-287f10.2 si:dkey-287f10.2 3 1 - 1.000 - - - - - - -
46. CMA1_11 CMA1_11 0 1 - 1.000 - - - - - - -
47. zgc:77112 ENSDARG00000015657 24 1 - 1.000 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
48. CABZ01038313.1 CABZ01038313.1 79 1 - 1.000 - - - - - - -
49. CU928854.1 CU928854.1 3 1 - 1.000 - - - - - - -
50. SSBP2 ENSDARG00000099727 22 1 - 1.000 - - - - - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
51. cldnj ENSDARG00000058880 59 1 - 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
52. si:ch211-113a14.26_3 6 1 - 1.000 - - - - - - - si:ch211-113a14.26
53. CU694254.1 CU694254.1 4 1 - 1.000 - - - - - - -
54. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
55. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
56. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
57. si:ch211-237c9.3 si:ch211-237c9.3 17 1 - 1.000 - - - - - - -
58. GRIK1 GRIK1 1 1 - 1.000 - - - - - - -
59. si:dkeyp-85d8.3 si:dkeyp-85d8.3 0 1 - 1.000 - - - - - - -
60. BX511006.2 BX511006.2 29 1 - 1.000 - - - - - - -
61. fabp10a ENSDARG00000038439 4 1 - 1.000 - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
62. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - 1.000 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
63. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
64. XKR7 ENSDARG00000026333 175 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
65. dnajb2 ENSDARG00000058644 30 1 - 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
66. si:ch73-91k6.8 si:ch73-91k6.8 37 1 - 1.000 - - - - - - -
67. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1 - 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
68. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - 1.000 - - - - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
69. zgc:195633 19 1 - 1.000 - - - - - - - zgc:195633
70. NRSN2 NRSN2 57 1 - 1.000 - - - - - - -
71. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
72. si:ch211-213i16.4 8 1 - 1.000 - - - - - - - si:ch211-213i16.4, transcript variant X1
73. si:ch211-214p13.3 ENSDARG00000087403 0 1 - 1.000 - - - - - - - si:ch211-214p13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-779]
74. tyro3 ENSDARG00000005356 4 1 - 1.000 - - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
75. ltk ENSDARG00000042861, ENSDARG00000116109 76 1 - 1.000 - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
76. LRP3 ENSDARG00000008485 1401 1 - 1.000 - - - - - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
77. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - 1.000 - - - - - - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
78. evlb ENSDARG00000099720 245 1 - 1.000 - - - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
79. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - 1.000 - - - - - - -
80. arsa ENSDARG00000042270 74 1 - 1.000 - - - - - - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
81. ME1 ENSDARG00000053215 8 1 - 1.000 - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
82. GAS2_1 GAS2_1 16 1 - 1.000 - - - - - - -
83. si:dkey-21o19.6 si:dkey-21o19.6 18 1 - 1.000 - - - - - - -
84. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - 1.000 - - - - - - -
85. rhobtb2b ENSDARG00000089340 4 1 - 1.000 - - - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
86. rab14l ENSDARG00000035188 18 1 - 1.000 - - - - - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
87. zgc:114037_2 11 1 - 1.000 - - - - - - - zgc:114037
88. ccdc64 ccdc64 2 1 - 1.000 - - - - - - -
89. ARX ARX 71 1 - 1.000 - - - - - - -
90. si:dkey-78a14.4 ENSDARG00000036066 17 1 - 1.000 - - - - - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
91. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 - 1.000 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
92. gpr88 24 1 - 1.000 - - - - - - - G protein-coupled receptor 88
93. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
94. KCNA2 KCNA2 66 1 - 1.000 - - - - - - -
95. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 - 1.000 - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
96. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1 - 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
97. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
98. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - 1.000 - - - - - - -
99. si:dkey-103i16.2 si:dkey-103i16.2 492 1 - 1.000 - - - - - - -
100. hes2.2 ENSDARG00000068168 197 1 - 1.000 - - - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]

There are 1069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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