Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdt1

Gene Name Gene ID Reads Annotation
cdt1 ENSDARG00000051854 206 chromatin licensing and DNA replication factor 1 [Source:ZFIN;Acc:ZDB-GENE-070111-1]










Genes with expression patterns similar to cdt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdt1 ENSDARG00000051854 206 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 chromatin licensing and DNA replication factor 1 [Source:ZFIN;Acc:ZDB-GENE-070111-1]
2. ZNF337_5 ZNF337_5 48 1.728 - 0.824 - - - - - 0.904 -
3. cyb5r4 ENSDARG00000020898 119 1.682 0.858 0.824 - - - - - - - cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
4. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 1.68 - 0.799 - - - - - 0.881 - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
5. pus7l_1 ENSDARG00000069780 49 1.645 - - - - - - 0.702 0.943 - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
6. trappc2 ENSDARG00000097660 760 1.597 - 0.836 - - - - 0.761 - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
7. tmem79b ENSDARG00000076861 154 1.595 - - - - - - 0.765 0.830 - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
8. sult3st1 ENSDARG00000009885 218 1.576 0.743 - - - - - - 0.833 - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
9. mcf2la ENSDARG00000075859 882 1.575 - 0.722 - - - - - 0.853 - mcf.2 cell line derived transforming sequence-like a [Source:ZFIN;Acc:ZDB-GENE-090312-122]
10. si:busm1-228j01.5 si:busm1-228j01.5 9 1.557 - 0.799 - - - - 0.758 - -
11. FBF1_1 FBF1_1 86 1.556 - 0.752 - - - - 0.804 - -
12. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 1.547 - - - - - - 0.719 0.828 - F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
13. hsd17b4 ENSDARG00000101239 301 1.519 - 0.815 - - - - - - 0.704 hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
14. morc3a ENSDARG00000056679 648 1.499 - - - - - - 0.725 0.774 - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
15. SNORA73_1 SNORA73_1 85 1.496 - 0.788 - - - - 0.708 - -
16. lamb2l ENSDARG00000033950 952 1.438 - 0.736 0.702 - - - - - - laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
17. lyrm5b ENSDARG00000045827 91 0.97 - 0.970 - - - - - - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
18. ccdc11 ccdc11 79 0.966 - 0.966 - - - - - - -
19. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 0.957 - - - - - - - 0.957 - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
20. htra1b ENSDARG00000014907 146 0.955 - - - - - - - 0.955 - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
21. got1l1 ENSDARG00000053644 49 0.948 - 0.948 - - - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
22. foxj2 ENSDARG00000057680 73 0.947 - 0.947 - - - - - - - forkhead box J2 [Source:ZFIN;Acc:ZDB-GENE-100922-240]
23. CABZ01069020.1 ENSDARG00000105806 19 0.945 - - - - - - - 0.945 - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
24. cyp2j20 ENSDARG00000094057 44 0.945 - - - - - - - 0.945 - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
25. si:ch211-149a19.3 ENSDARG00000079456 115 0.945 - - - - - - - 0.945 - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
26. fam193b ENSDARG00000102831 442 0.942 - 0.942 - - - - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
27. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.941 - - - - - - - 0.941 - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
28. TRIM35_7 TRIM35_7 22 0.941 - - - - - - - 0.941 -
29. ms4a17a.2 ENSDARG00000105674 32 0.94 - - - - - - - 0.940 - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
30. CARD11 ENSDARG00000052741 249 0.94 - - - - - - - 0.940 - caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
31. mfsd10 ENSDARG00000086786 304 0.94 - - - - - - - 0.940 - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
32. CABZ01044023.1 ENSDARG00000117734 240 0.94 - - - - - - - 0.940 -
33. CABZ01113899.1 CABZ01113899.1 11 0.939 - - - - - - - 0.939 -
34. emx3 ENSDARG00000020417 85 0.938 - - - - - - - 0.938 - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
35. NMUR1 NMUR1 30 0.938 - - - - - - - 0.938 -
36. TTF1_2 TTF1_2 26 0.937 - - - - - - - 0.937 -
37. si:ch1073-280h16.1 si:ch1073-280h16.1 229 0.936 - 0.936 - - - - - - -
38. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 0.936 - - - - - - - 0.936 - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
39. C19H18orf21 C19H18orf21 338 0.934 - - - - - - - 0.934 -
40. si:dkey-106l3.7 ENSDARG00000093444 29 0.933 - - - - - - - 0.933 - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
41. MAL_1 MAL_1 200 0.933 - - - - - - - 0.933 -
42. trim35-27 ENSDARG00000035009 62 0.933 - - - - - - - 0.933 - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
43. msxa msxa 263 0.932 - - - - - - - 0.932 -
44. ttll10 ENSDARG00000090472 36 0.932 - - - - - - - 0.932 - tubulin tyrosine ligase-like family, member 10 [Source:ZFIN;Acc:ZDB-GENE-081104-350]
45. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.932 - 0.932 - - - - - - - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
46. C9H3orf38 C9H3orf38 83 0.932 - - - - - - - 0.932 -
47. golga2 ENSDARG00000063197 30 0.932 - - - - - - - 0.932 - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
48. si:ch211-23l10.3 ENSDARG00000073998 113 0.93 - 0.930 - - - - - - - si:ch211-23l10.3 [Source:ZFIN;Acc:ZDB-GENE-091204-25]
49. cers4a ENSDARG00000031387 19 0.929 - - - - - - - 0.929 - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
50. si:ch211-147d7.5 ENSDARG00000095457 132 0.929 - - - - - - - 0.929 - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
51. arhgap22 ENSDARG00000021255 117 0.928 - - - - - - - 0.928 - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
52. MYO9B ENSDARG00000078313 97 0.927 - - - - - - - 0.927 - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
53. slc25a15a ENSDARG00000063539 50 0.927 - - - - - - - 0.927 - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
54. tmem144a ENSDARG00000037409, ENSDARG00000110998, ENSDARG00000112588, ENSDARG00000116960 64 0.926 - - - - - - - 0.926 - transmembrane protein 144a [Source:ZFIN;Acc:ZDB-GENE-040822-12]
55. iah1 ENSDARG00000015765 326 0.926 - 0.926 - - - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
56. CU856359.2 CU856359.2 182 0.924 - - - - - - - 0.924 -
57. sqlea ENSDARG00000079946 145 0.924 - - - - - - - 0.924 - squalene epoxidase a [Source:ZFIN;Acc:ZDB-GENE-071004-98]
58. CU638740.3 CU638740.3 164 0.923 - - - - - - - 0.923 -
59. HHIPL2 ENSDARG00000060008 162 0.923 - - - - - - - 0.923 - HHIP-like 2 [Source:ZFIN;Acc:ZDB-GENE-131120-145]
60. pik3cg ENSDARG00000017757 157 0.922 - - - - - - - 0.922 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
61. zgc:63691 zgc:63691 180 0.922 - 0.922 - - - - - - -
62. lpar2a ENSDARG00000042338 285 0.921 - - - - - - - 0.921 - lysophosphatidic acid receptor 2a [Source:ZFIN;Acc:ZDB-GENE-040801-97]
63. zgc:112484 zgc:112484 780 0.921 - - - - - - - 0.921 -
64. CU929133.1 CU929133.1 94 0.92 - - - - - - - 0.920 -
65. C24H18orf8 C24H18orf8 87 0.919 - - - - - - - 0.919 -
66. myh7ba ENSDARG00000076075 140 0.919 - - - - - - - 0.919 - myosin, heavy chain 7B, cardiac muscle, beta a [Source:ZFIN;Acc:ZDB-GENE-100914-2]
67. gpx1b ENSDARG00000006207 67 0.919 - - - - - - - 0.919 - glutathione peroxidase 1b [Source:ZFIN;Acc:ZDB-GENE-040912-60]
68. he2 945 0.918 - - - - - - - 0.918 - hatching enzyme 2
69. rxrba ENSDARG00000078954 85 0.918 - - - - - - - 0.918 - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
70. si:dkey-202b22.6 ENSDARG00000045552 190 0.918 - - - - - - - 0.918 - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
71. CRP CRP 136 0.917 - - - - - - - 0.917 -
72. gdf6a ENSDARG00000053479 121 0.916 - - - - - - - 0.916 - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
73. immp1l ENSDARG00000045935 175 0.915 - - - - - - - 0.915 - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
74. dhrs13a.2 ENSDARG00000111240 491 0.915 - - - - - - - 0.915 - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
75. hacl1 ENSDARG00000020529 228 0.915 - - - - - - - 0.915 - 2-hydroxyacyl-CoA lyase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2058]
76. il17d ENSDARG00000010700, ENSDARG00000115462 102 0.912 - - - - - - - 0.912 - interleukin 17d [Source:ZFIN;Acc:ZDB-GENE-061031-4]
77. pargl ENSDARG00000101719 155 0.912 - - - - - - - 0.912 - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
78. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 0.911 - - - - - - - 0.911 - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
79. mogat3b ENSDARG00000003635 394 0.911 - - - - - - - 0.911 - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
80. CU302436.4 CU302436.4 310 0.909 - - - - - - - 0.909 -
81. dpm1 ENSDARG00000057011, ENSDARG00000112573 1089 0.908 - - - - - - - 0.908 - dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-115]
82. spata20 ENSDARG00000013880 46 0.907 - - - - - - - 0.907 - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
83. LYRM9 ENSDARG00000075528 329 0.904 - - - - - - - 0.904 - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
84. aak1 aak1 81 0.903 - 0.903 - - - - - - -
85. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 0.903 - - - - - - - 0.903 - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
86. CR759791.3 CR759791.3 134 0.902 - - - - - - - 0.902 -
87. mocs3 ENSDARG00000008239 163 0.901 - - - - - - - 0.901 - molybdenum cofactor synthesis 3 [Source:ZFIN;Acc:ZDB-GENE-040426-782]
88. traip ENSDARG00000011262 410 0.901 - - - - - - - 0.901 - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
89. terf1 ENSDARG00000058710 317 0.901 - - - - - - - 0.901 - telomeric repeat binding factor (NIMA-interacting) 1 [Source:ZFIN;Acc:ZDB-GENE-090612-2]
90. gcnt3 ENSDARG00000060471 37 0.901 - 0.901 - - - - - - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
91. polr2m ENSDARG00000074968, ENSDARG00000113507 352 0.9 - - - - - - - 0.900 - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
92. ZBTB39 ENSDARG00000019265 687 0.9 - - - - - - 0.900 - - zinc finger and BTB domain containing 39 [Source:ZFIN;Acc:ZDB-GENE-130822-1]
93. mgme1 ENSDARG00000016656 173 0.899 - 0.899 - - - - - - - mitochondrial genome maintenance exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-041212-68]
94. mapkapk3 ENSDARG00000111612 370 0.899 - 0.899 - - - - - - - mitogen-activated protein kinase-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-061215-124]
95. cry1a cry1a 738 0.898 - - - - - - - 0.898 -
96. RNF130 ENSDARG00000089767 559 0.898 - - - - - - - 0.898 - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
97. acot8 ENSDARG00000014138 89 0.898 - - - - - - - 0.898 - acyl-CoA thioesterase 8 [Source:ZFIN;Acc:ZDB-GENE-041010-174]
98. CENPA 63 0.898 - - - - - - - 0.898 - histone H3-like centromeric protein A
99. rpain ENSDARG00000063021 186 0.897 - - - - - - - 0.897 - RPA interacting protein [Source:ZFIN;Acc:ZDB-GENE-060825-212]
100. TNFRSF11B ENSDARG00000098377 98 0.896 - - - - - - - 0.896 - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]

There are 766 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA