Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdkn3

Gene Name Gene ID Reads Annotation
cdkn3 ENSDARG00000039130 1051 cyclin-dependent kinase inhibitor 3 [Source:ZFIN;Acc:ZDB-GENE-060427-2]










Genes with expression patterns similar to cdkn3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdkn3 ENSDARG00000039130 1051 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase inhibitor 3 [Source:ZFIN;Acc:ZDB-GENE-060427-2]
2. nrd1 nrd1 324 1.944 - 0.996 - - - - - 0.948 -
3. C13H10orf54 C13H10orf54 450 1.873 - 0.996 - - - - - 0.877 -
4. march5l ENSDARG00000028559 943 1.858 - 0.984 - - - - - 0.874 - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]
5. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.855 - 0.997 - - - - - 0.858 - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
6. pon2 ENSDARG00000016856 1382 1.774 - 0.993 - - - 0.781 - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
7. bves ENSDARG00000058548 2291 1.76 0.770 0.990 - - - - - - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
8. ahr2 ENSDARG00000021833 762 1.737 - 0.994 - - - 0.743 - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
9. clint1a ENSDARG00000025535 4965 1.713 - 0.906 - - - - - 0.807 - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
10. rhoj ENSDARG00000020250 1522 1.696 - 0.993 - - - - - 0.703 - ras homolog family member J [Source:ZFIN;Acc:ZDB-GENE-040724-272]
11. sgcd ENSDARG00000098573 4980 1.68 - 0.929 - - - - 0.751 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
12. hfe2 4113 1.67 0.726 - - - - - - 0.944 - hemochromatosis type 2
13. cdv3 ENSDARG00000023028 12380 1.664 - 0.964 - - - - 0.700 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
14. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 1.659 - 0.951 - - - - 0.708 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
15. bin1 bin1 3199 1.649 0.734 0.915 - - - - - - -
16. flncb ENSDARG00000018820 5595 1.606 - 0.879 - - - - 0.727 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
17. mrpl16 ENSDARG00000075325 592 1.595 - - - - - - 0.782 0.813 - mitochondrial ribosomal protein L16 [Source:ZFIN;Acc:ZDB-GENE-041122-1]
18. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.572 0.794 - - - - - 0.778 - -
19. FHOD3_1 FHOD3_1 983 1.56 0.741 - - - - - 0.819 - -
20. CABZ01074435.1 CABZ01074435.1 4551 1.56 0.742 - - - - - 0.818 - -
21. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.553 0.718 - - - - - 0.835 - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
22. adss ENSDARG00000002071 5497 1.519 0.758 - - - - - 0.761 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
23. murcb murcb 13655 1.513 0.742 - - - - - 0.771 - -
24. synpo2lb ENSDARG00000078696 2361 1.51 0.729 - - - - - 0.781 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
25. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.501 - - - - - - 0.723 0.778 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
26. ALDH1L2 ENSDARG00000070230 2550 1.498 0.781 - - - - - 0.717 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
27. C22H19orf70 C22H19orf70 4393 1.492 0.746 - - - - - 0.746 - -
28. nexn ENSDARG00000057317 10972 1.489 0.783 - - - - - 0.706 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
29. ITGB1BP2 ENSDARG00000030176 2472 1.488 0.734 - - - - - 0.754 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
30. lsm6 ENSDARG00000036995 4377 1.485 0.742 - - - - - 0.743 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
31. prx ENSDARG00000017246 6183 1.485 0.774 - - - - - 0.711 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
32. si:ch211-156j16.1 ENSDARG00000092035 7441 1.484 0.765 - - - - - 0.719 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
33. znf106a ENSDARG00000016651 6049 1.473 0.735 - - - - - 0.738 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
34. trdn ENSDARG00000041779 4283 1.473 0.770 - - - - - 0.703 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
35. rtn2a ENSDARG00000016088 12184 1.456 0.737 - - - - - 0.719 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
36. txlnba ENSDARG00000020594 9385 1.447 - 0.704 - - - - 0.743 - - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
37. mrps33 ENSDARG00000020015 3551 1.444 - - - - - - 0.742 0.702 - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
38. PTGES3L PTGES3L 4801 1.443 0.716 - - - - - 0.727 - -
39. BX530018.3 ENSDARG00000107022 614 1.44 0.723 - - - - - 0.717 - -
40. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.432 0.700 - - - - - 0.732 - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
41. sptb ENSDARG00000030490 7128 1.426 0.724 - - - - - 0.702 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
42. sar1ab ENSDARG00000033320 3984 1.421 0.711 - - - - - 0.710 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
43. efemp2a ENSDARG00000094324 39261 1.417 0.714 - - - - - 0.703 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
44. hccs hccs 1758 0.998 - 0.998 - - - - - - -
45. PDPR ENSDARG00000103288 711 0.997 - 0.997 - - - - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
46. SLC12A6 SLC12A6 883 0.997 - 0.997 - - - - - - -
47. GRAMD1B GRAMD1B 311 0.997 - 0.997 - - - - - - -
48. STARD7 ENSDARG00000074858 889 0.997 - 0.997 - - - - - - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
49. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.997 - 0.997 - - - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
50. uck2a ENSDARG00000006074 1554 0.997 - 0.997 - - - - - - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
51. KIF2A ENSDARG00000043571 1560 0.997 - 0.997 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
52. supt20 ENSDARG00000078658 713 0.997 - 0.997 - - - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
53. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 0.997 - 0.997 - - - - - - - SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
54. gtf2f1 ENSDARG00000032129 3041 0.997 - 0.997 - - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
55. SLC6A16_1 SLC6A16_1 1130 0.997 - 0.997 - - - - - - -
56. dnajb5 ENSDARG00000052881, ENSDARG00000116664 885 0.996 - 0.996 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:ZFIN;Acc:ZDB-GENE-070705-308]
57. si:ch211-129c21.1 ENSDARG00000024775 371 0.996 - 0.996 - - - - - - - si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
58. tmem110 497 0.996 - 0.996 - - - - - - - transmembrane protein 110
59. ypel1 ENSDARG00000035630, ENSDARG00000112717 739 0.996 - 0.996 - - - - - - - yippee-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-41]
60. C19H1orf85 C19H1orf85 1587 0.996 - 0.996 - - - - - - -
61. si:ch211-271g18.4 ENSDARG00000115564 197 0.996 - 0.996 - - - - - - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
62. CABZ01057907.1 CABZ01057907.1 1140 0.996 - 0.996 - - - - - - -
63. CR293507.1 ENSDARG00000112572 3198 0.996 - 0.996 - - - - - - -
64. prmt6 ENSDARG00000069706 484 0.996 - 0.996 - - - - - - - protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
65. CASK CASK 1750 0.996 - 0.996 - - - - - - -
66. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 0.996 - 0.996 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
67. si:ch211-133l11.10 ENSDARG00000005626 381 0.996 - 0.996 - - - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
68. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.996 - 0.996 - - - - - - - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
69. kdm8 ENSDARG00000102512 321 0.996 - 0.996 - - - - - - - lysine (K)-specific demethylase 8 [Source:ZFIN;Acc:ZDB-GENE-040718-411]
70. CTIF ENSDARG00000090617 270 0.996 - 0.996 - - - - - - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
71. pah ENSDARG00000020143 1551 0.996 - 0.996 - - - - - - - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
72. glsb ENSDARG00000040705 1439 0.996 - 0.996 - - - - - - - glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
73. HEATR6 ENSDARG00000073686 241 0.996 - 0.996 - - - - - - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
74. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 0.996 - 0.996 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
75. ncam1b ENSDARG00000007220 233 0.996 - 0.996 - - - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
76. adm2a ENSDARG00000045708, ENSDARG00000111740 246 0.996 - 0.996 - - - - - - - adrenomedullin 2a [Source:ZFIN;Acc:ZDB-GENE-041210-100]
77. nucb2b ENSDARG00000036291 911 0.996 - 0.996 - - - - - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
78. zgc:113625 ENSDARG00000054160 276 0.996 - 0.996 - - - - - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]
79. prkab1a ENSDARG00000044183 264 0.996 - 0.996 - - - - - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
80. olfm2a ENSDARG00000077847 230 0.996 - 0.996 - - - - - - - olfactomedin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2882]
81. ENSDARG00000096553 ENSDARG00000096553 388 0.996 - 0.996 - - - - - - -
82. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 0.996 - 0.996 - - - - - - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
83. mxf ENSDARG00000026049 195 0.996 - 0.996 - - - - - - - myxovirus (influenza virus) resistance F [Source:ZFIN;Acc:ZDB-GENE-030721-9]
84. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.996 - 0.996 - - - - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
85. klf6a ENSDARG00000029072 3758 0.996 - 0.996 - - - - - - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
86. ITFG1 ENSDARG00000075584, ENSDARG00000110264 615 0.996 - 0.996 - - - - - - - integrin alpha FG-GAP repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-121003-3]
87. farp1 ENSDARG00000074381 406 0.996 - 0.996 - - - - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
88. acmsd ENSDARG00000062549 201 0.996 - 0.996 - - - - - - - aminocarboxymuconate semialdehyde decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-103]
89. sgce ENSDARG00000012138 912 0.996 - 0.996 - - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
90. lman2lb ENSDARG00000088663 1641 0.996 - 0.996 - - - - - - - lectin, mannose-binding 2-like b [Source:ZFIN;Acc:ZDB-GENE-060929-256]
91. ptp4a2 ptp4a2 3196 0.995 - 0.995 - - - - - - -
92. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 0.995 - 0.995 - - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
93. eps15l1a ENSDARG00000042670 1565 0.995 - 0.995 - - - - - - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
94. snx16 ENSDARG00000046072 931 0.995 - 0.995 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
95. amot ENSDARG00000078335 1757 0.995 - 0.995 - - - - - - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
96. maea ENSDARG00000053691 1840 0.995 - 0.995 - - - - - - - macrophage erythroblast attacher [Source:ZFIN;Acc:ZDB-GENE-030131-294]
97. hoxc10a ENSDARG00000070348 2323 0.995 - 0.995 - - - - - - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
98. traf4b ENSDARG00000038964 346 0.995 - 0.995 - - - - - - - tnf receptor-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-040305-2]
99. tgfb3 ENSDARG00000019367 2327 0.995 - 0.995 - - - - - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
100. gle1 ENSDARG00000043559 1362 0.995 - 0.995 - - - - - - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]

There are 834 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA