Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdkn1ba

Gene Name Gene ID Reads Annotation
cdkn1ba ENSDARG00000029018 1431 cyclin-dependent kinase inhibitor 1Ba [Source:ZFIN;Acc:ZDB-GENE-040812-3]










Genes with expression patterns similar to cdkn1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdkn1ba ENSDARG00000029018 1431 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase inhibitor 1Ba [Source:ZFIN;Acc:ZDB-GENE-040812-3]
2. nelfe ENSDARG00000004343 1647 2.32 - - - 0.786 - 0.786 0.748 - - negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]
3. duox ENSDARG00000062632 1406 1.562 - - - 0.751 - 0.811 - - - dual oxidase [Source:ZFIN;Acc:ZDB-GENE-091117-14]
4. erf ENSDARG00000063417 1053 1.56 0.701 - - - - - 0.859 - - Ets2 repressor factor [Source:ZFIN;Acc:ZDB-GENE-010724-17]
5. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.551 - - - - - 0.719 0.832 - - StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
6. gosr2 ENSDARG00000053070 944 1.516 - - - 0.774 - - 0.742 - - golgi SNAP receptor complex member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3290]
7. atp13a atp13a 2867 1.504 0.713 - - - - - 0.791 - -
8. sap130a ENSDARG00000056924 3156 1.497 0.733 - - - - - 0.764 - - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
9. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.474 - 0.740 - - - - 0.734 - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
10. hdgfrp2 7462 1.471 - 0.736 - - - 0.735 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
11. prrx1b ENSDARG00000042027 1128 1.462 - - - - - 0.748 - 0.714 - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
12. FRRS1_1 FRRS1_1 831 1.46 - - - 0.760 - 0.700 - - -
13. C3H17orf53 C3H17orf53 191 1.448 0.723 - - 0.725 - - - - -
14. CPLX1 CPLX1 386 1.436 - - - 0.706 - - 0.730 - -
15. ncdn ENSDARG00000098544 267 1.42 0.720 - - 0.700 - - - - - neurochondrin [Source:ZFIN;Acc:ZDB-GENE-061220-6]
16. h2afvb ENSDARG00000116491 35692 1.414 - 0.706 - - - 0.708 - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
17. C24H8orf44 C24H8orf44 405 0.95 - - - 0.950 - - - - -
18. shda ENSDARG00000094243 929 0.945 - - - 0.945 - - - - - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
19. rps6ka1 ENSDARG00000033437 366 0.898 - - - - - - 0.898 - - ribosomal protein S6 kinase a, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060929-516]
20. ube2j2 ENSDARG00000061161 844 0.87 - - - 0.870 - - - - - ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
21. guf1 ENSDARG00000029088 231 0.869 - - - 0.869 - - - - - GUF1 homolog, GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-4289]
22. msl2b ENSDARG00000039430 1003 0.866 - 0.866 - - - - - - - male-specific lethal 2 homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1621]
23. RAC1 RAC1 2008 0.865 - - - 0.865 - - - - -
24. pias2 ENSDARG00000092979, ENSDARG00000115060 2317 0.864 - - - - - - 0.864 - - protein inhibitor of activated STAT, 2 [Source:ZFIN;Acc:ZDB-GENE-060424-1]
25. top2a ENSDARG00000024488 4273 0.862 - - - - - 0.862 - - - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
26. rrp36 ENSDARG00000032516, ENSDARG00000109916 916 0.857 - - - - - - 0.857 - - ribosomal RNA processing 36 [Source:ZFIN;Acc:ZDB-GENE-030131-9751]
27. zgc:111983 ENSDARG00000006588 671 0.855 - - - - - - 0.855 - - zgc:111983 [Source:ZFIN;Acc:ZDB-GENE-050417-335]
28. CABZ01085888.1 CABZ01085888.1 868 0.854 - - - - - 0.854 - - -
29. mgat4b ENSDARG00000004115 538 0.852 - 0.852 - - - - - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:ZFIN;Acc:ZDB-GENE-040704-19]
30. tshz3a ENSDARG00000087394 2455 0.852 - - - - - - 0.852 - - teashirt zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-100322-1]
31. DFNA5 DFNA5 201 0.849 0.849 - - - - - - - -
32. ppm1k ENSDARG00000010655 1285 0.849 - - - - - 0.849 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1K [Source:ZFIN;Acc:ZDB-GENE-050306-8]
33. tor1 ENSDARG00000077950 1027 0.849 0.849 - - - - - - - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
34. si:ch211-218c6.8 ENSDARG00000092364 1270 0.847 - - - - - 0.847 - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
35. TRAK2 ENSDARG00000102471 2258 0.845 - - - - - - 0.845 - - trafficking protein, kinesin binding 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7496]
36. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 0.845 - - - - - - 0.845 - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
37. RPH3A RPH3A 309 0.845 - - - - - 0.845 - - -
38. C3H16orf13 C3H16orf13 652 0.843 - - - - - 0.843 - - -
39. im:6904045 ENSDARG00000115174 179 0.841 - - - 0.841 - - - - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
40. mkl1b 1408 0.84 - - - - - - 0.840 - - megakaryoblastic leukemia (translocation) 1b, transcript variant X7
41. ap1s1 ENSDARG00000056803 3854 0.838 - - - - - 0.838 - - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
42. si:ch211-147d7.5 ENSDARG00000095457 132 0.837 0.837 - - - - - - - - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
43. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 0.837 - - - - - - 0.837 - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
44. KBTBD2 ENSDARG00000087226 707 0.834 - - - - - - 0.834 - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
45. tma16 ENSDARG00000008068, ENSDARG00000115226 1169 0.834 - - - - - 0.834 - - - translation machinery associated 16 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-20]
46. cpsf2 ENSDARG00000028971 841 0.833 0.833 - - - - - - - - cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]
47. SPIN4 SPIN4 120 0.832 0.832 - - - - - - - -
48. foxp4 ENSDARG00000076120 9458 0.831 - 0.831 - - - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
49. mios ENSDARG00000102587 684 0.83 0.830 - - - - - - - - missing oocyte, meiosis regulator, homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-856]
50. im:7148400 im:7148400 787 0.83 - - - - - 0.830 - - -
51. hbegfb ENSDARG00000031246 236 0.829 - 0.829 - - - - - - - heparin-binding EGF-like growth factor b [Source:ZFIN;Acc:ZDB-GENE-070820-6]
52. cdh11 ENSDARG00000021442 1601 0.826 - - - - - 0.826 - - - cadherin 11, type 2, OB-cadherin (osteoblast) [Source:ZFIN;Acc:ZDB-GENE-980526-170]
53. fam102ba ENSDARG00000053104 845 0.824 - 0.824 - - - - - - - family with sequence similarity 102, member B, a [Source:ZFIN;Acc:ZDB-GENE-060616-312]
54. meis2b ENSDARG00000077840 5166 0.824 - 0.824 - - - - - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
55. lrrc59 ENSDARG00000071426, ENSDARG00000109955 1998 0.824 - - - - - - 0.824 - - leucine rich repeat containing 59 [Source:ZFIN;Acc:ZDB-GENE-040426-2547]
56. cav2 ENSDARG00000052000 2516 0.823 - - - - - - 0.823 - - caveolin 2 [Source:ZFIN;Acc:ZDB-GENE-040625-164]
57. CCNYL1 ENSDARG00000099692 1330 0.823 - 0.823 - - - - - - - cyclin Y-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-732]
58. wdfy1 ENSDARG00000005425 3628 0.822 - - - - - 0.822 - - - WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
59. CABZ01084569.1 CABZ01084569.1 650 0.821 - 0.821 - - - - - - -
60. vps36 ENSDARG00000057021 636 0.821 - - - - - - 0.821 - - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
61. mblac2 ENSDARG00000059689 62 0.82 0.820 - - - - - - - - metallo-beta-lactamase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-313]
62. pdcd10b ENSDARG00000012591 3395 0.819 - - - - - 0.819 - - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
63. ZFHX2 2463 0.817 - - - - - 0.817 - - - zinc finger homeobox 2, transcript variant X2
64. wrap53 ENSDARG00000086150 975 0.817 - - - - - 0.817 - - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
65. si:dkey-172j4.3 ENSDARG00000074183 563 0.816 - - - - - 0.816 - - - si:dkey-172j4.3 [Source:ZFIN;Acc:ZDB-GENE-081104-24]
66. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 0.815 - 0.815 - - - - - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
67. si:ch211-39k3.2 ENSDARG00000075881 531 0.815 - - - - - 0.815 - - - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
68. sepn1 801 0.815 0.815 - - - - - - - - selenoprotein N, 1
69. zgc:112484 zgc:112484 780 0.815 0.815 - - - - - - - -
70. tmem259 ENSDARG00000060442 1141 0.814 - - - - - - 0.814 - - transmembrane protein 259 [Source:ZFIN;Acc:ZDB-GENE-080225-14]
71. rassf1 ENSDARG00000004840 1248 0.814 - 0.814 - - - - - - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
72. tmcc3 ENSDARG00000045525, ENSDARG00000109550 1347 0.814 - - - - - - 0.814 - - transmembrane and coiled-coil domain family 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1811]
73. mtmr9 ENSDARG00000015860 1339 0.814 - - - 0.814 - - - - - myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
74. mllt4 mllt4 2939 0.813 - - - - - 0.813 - - -
75. DACT3 DACT3 766 0.812 - - - - - 0.812 - - -
76. akap9 ENSDARG00000079610 654 0.811 - - - - - 0.811 - - - A kinase (PRKA) anchor protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-7276]
77. cant1a ENSDARG00000012192 1324 0.811 - - - - - 0.811 - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
78. rab43 ENSDARG00000059404 1118 0.811 - 0.811 - - - - - - - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
79. trim35-28 ENSDARG00000021021 1380 0.81 - - - - - 0.810 - - - tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
80. fra10ac1 ENSDARG00000102615 425 0.81 0.810 - - - - - - - - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
81. rab5aa ENSDARG00000018602 8947 0.809 - - - - - 0.809 - - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
82. sin3aa ENSDARG00000079716 580 0.809 - - - - - 0.809 - - - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
83. arhgap5 ENSDARG00000061294 2228 0.809 - - - - - 0.809 - - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
84. cbx7a ENSDARG00000038025 106 0.808 0.808 - - - - - - - - chromobox homolog 7a [Source:ZFIN;Acc:ZDB-GENE-050417-400]
85. CSK ENSDARG00000067996 476 0.808 - - - - - 0.808 - - - C-terminal Src kinase [Source:ZFIN;Acc:ZDB-GENE-061103-493]
86. cdc123 ENSDARG00000075025 418 0.808 - - - - - - 0.808 - - cell division cycle 123 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1680]
87. clcn7 ENSDARG00000019556 1410 0.807 - - - - - 0.807 - - - chloride channel 7 [Source:ZFIN;Acc:ZDB-GENE-061103-196]
88. churc1 ENSDARG00000010831, ENSDARG00000113360 1271 0.806 - - - - - 0.806 - - - churchill domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-150]
89. fbxo44 ENSDARG00000022623, ENSDARG00000114432 406 0.806 0.806 - - - - - - - - F-box protein 44 [Source:ZFIN;Acc:ZDB-GENE-041212-85]
90. AKAP12 AKAP12 140 0.806 - - - - - - 0.806 - -
91. vps9d1 ENSDARG00000019195 582 0.806 - - - - - 0.806 - - - VPS9 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050306-57]
92. ano10b ENSDARG00000018159 535 0.805 - - - - - - 0.805 - - anoctamin 10b [Source:ZFIN;Acc:ZDB-GENE-061013-169]
93. znf410 ENSDARG00000008218 1807 0.805 - 0.805 - - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
94. coro7 ENSDARG00000089616 2141 0.804 - - - - - - 0.804 - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
95. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 0.804 - - - - - 0.804 - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
96. SDSL ENSDARG00000074698 34 0.803 0.803 - - - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
97. nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 0.803 - - - - - 0.803 - - - nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]
98. ireb2 ENSDARG00000021466 699 0.802 - - - - - - 0.802 - - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
99. raly ENSDARG00000059972 481 0.802 - 0.802 - - - - - - - RALY heterogeneous nuclear ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-041010-127]
100. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 0.802 - - - 0.802 - - - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]

There are 680 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA