Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdkl5

Gene Name Gene ID Reads Annotation
cdkl5 ENSDARG00000015240 68 cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]










Genes with expression patterns similar to cdkl5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdkl5 ENSDARG00000015240 68 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
2. pcdh2ac ENSDARG00000099783 325 1.853 - 0.941 - - - 0.912 - - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
3. si:dkey-24g18.3 si:dkey-24g18.3 60 1.79 - - - - - 0.939 0.851 - -
4. ncam1a ENSDARG00000056181 193 1.733 - 0.888 - - - 0.845 - - - neural cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-990415-31]
5. gcfc2 ENSDARG00000079020 479 1.709 - 1.000 - - - 0.709 - - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
6. myo10l1 ENSDARG00000074723 21 1.708 0.887 - - - - - 0.821 - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
7. rab36 ENSDARG00000014058 70 1.708 - - - - - 0.948 0.760 - - RAB36, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040910-5]
8. BX530409.1 BX530409.1 65 1.688 - - - - 0.832 0.856 - - -
9. ANKRD52 ANKRD52 78 1.675 0.826 0.849 - - - - - - -
10. si:ch211-42i9.5 si:ch211-42i9.5 21 1.673 0.887 - - - - 0.786 - - -
11. sorcs3b ENSDARG00000077349 72 1.668 0.887 - - - - 0.781 - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
12. exosc4 ENSDARG00000103432 21 1.651 0.887 0.764 - - - - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
13. CABZ01057633.1 CABZ01057633.1 39 1.651 0.887 0.764 - - - - - - -
14. si:ch211-260c23.1 13 1.642 - 0.883 - - - - - 0.759 - si:ch211-260c23.1, transcript variant X7
15. DTX3 DTX3 303 1.641 - - - - - 0.758 0.883 - -
16. si:dkey-5n7.2 ENSDARG00000102339 42 1.636 - - - - 0.765 - 0.871 - - si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254]
17. znf142 ENSDARG00000061373 47 1.606 - - - - - 0.815 0.791 - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
18. pou2f2b pou2f2b 134 1.6 0.887 - - - - 0.713 - - -
19. TMEM27 TMEM27 261 1.599 0.763 0.836 - - - - - - -
20. cbln2b ENSDARG00000077151 38 1.587 - 0.764 - - - 0.823 - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
21. btr09 ENSDARG00000054805, ENSDARG00000115798 20 1.585 - 0.764 - - - - 0.821 - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
22. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 1.582 - 0.764 - - - - 0.818 - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
23. ogfrl1 ENSDARG00000061223 64 1.571 - - - - - 0.786 0.785 - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
24. zgc:113625 ENSDARG00000054160 276 1.564 0.828 - - - - 0.736 - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]
25. AL844186.1 ENSDARG00000114351 41 1.563 0.742 - - - - - 0.821 - -
26. CU694320.1 CU694320.1 6 1.55 - 0.764 - - - 0.786 - - -
27. C24H16orf11 C24H16orf11 32 1.549 - 0.728 - - - - 0.821 - -
28. TMEM218 ENSDARG00000027129 716 1.544 - - - - - 0.801 0.743 - - transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
29. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1.542 - 0.764 - - - 0.778 - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
30. shisa4 ENSDARG00000006307, ENSDARG00000112041 109 1.537 - 0.709 - - - 0.828 - - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
31. cacnb3a ENSDARG00000001881, ENSDARG00000110795, ENSDARG00000113797 27 1.534 0.734 - - - - 0.800 - - - calcium channel, voltage-dependent, beta 3a [Source:ZFIN;Acc:ZDB-GENE-060221-2]
32. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 1.524 - 0.770 - - 0.754 - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
33. tfr1a ENSDARG00000101322 105 1.516 - 0.730 - - - 0.786 - - - transferrin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-041220-1]
34. irf3 ENSDARG00000076251 8 1.503 - 0.764 - 0.739 - - - - - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
35. serpinb1l1 ENSDARG00000095830 14 1.503 - - - - 0.762 - 0.741 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040715-5]
36. crhbp ENSDARG00000024831 63 1.49 - 0.764 - - - - 0.726 - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
37. stard3nl ENSDARG00000045421 316 1.488 - - - - - 0.711 0.777 - - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
38. wu:fb63c12 26 1.486 - - - - - - 0.785 0.701 - wu:fb63c12
39. dtnbp1b ENSDARG00000055206 64 1.486 - - - - 0.755 0.731 - - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
40. disp2 ENSDARG00000042846 53 1.475 - 0.764 - - - 0.711 - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
41. dlgap3 ENSDARG00000055459 85 1.469 - 0.741 - - - 0.728 - - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
42. si:rp71-15d4.6 si:rp71-15d4.6 95 1.452 0.717 - - - - - 0.735 - -
43. cox4i2 ENSDARG00000022509 362 1.421 - 0.714 - - - - 0.707 - - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
44. pot1 ENSDARG00000079915 42 1 - 1.000 - - - - - - - protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
45. si:dkey-57h18.2 33 1 - 1.000 - - - - - - - si:dkey-57h18.2, transcript variant X1
46. mir219-3 46 1 - - - - - 1.000 - - - microRNA 219-3
47. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 0.989 - - - - - 0.989 - - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
48. fam43b ENSDARG00000070222 92 0.968 - - - - - 0.968 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
49. fam49a ENSDARG00000006672 939 0.967 - - - - - 0.967 - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
50. zgc:112001 ENSDARG00000078034 93 0.967 - - - - - 0.967 - - - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
51. lhfpl3 ENSDARG00000021595 107 0.967 - - - - - 0.967 - - - LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
52. cdh7 582 0.966 - - - - - 0.966 - - - cadherin 7, type 2, transcript variant X1
53. GADD45G GADD45G 382 0.955 - - - - - 0.955 - - -
54. si:ch211-247j9.1 ENSDARG00000079283 217 0.953 - - - - - 0.953 - - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
55. TRIM46 TRIM46 73 0.949 - - - - - 0.949 - - -
56. BX470211.1 ENSDARG00000105629 111 0.945 - - - - - - 0.945 - -
57. tac3a ENSDARG00000093089, ENSDARG00000110723 75 0.945 - - - - - 0.945 - - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
58. gtf3c6 ENSDARG00000043301 97 0.942 - 0.942 - - - - - - - general transcription factor IIIC, polypeptide 6, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1009]
59. eps15 ENSDARG00000078216 246 0.941 - - - - - - 0.941 - - epidermal growth factor receptor pathway substrate 15 [Source:ZFIN;Acc:ZDB-GENE-081104-264]
60. si:ch211-80h18.1 ENSDARG00000078522 1941 0.941 - 0.941 - - - - - - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
61. asb16 ENSDARG00000056468, ENSDARG00000110292 126 0.941 - 0.941 - - - - - - - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
62. SMARCA4 ENSDARG00000104339 48 0.939 0.939 - - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
63. SLC35F4 ENSDARG00000103124 55 0.937 - - - - - 0.937 - - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
64. CT867948.2 CT867948.2 131 0.937 - 0.937 - - - - - - -
65. otpb ENSDARG00000058379 1143 0.937 - - - - - 0.937 - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
66. CR974475.2 CR974475.2 38 0.937 - - - - - 0.937 - - -
67. ZNF337_16 ZNF337_16 22 0.935 0.935 - - - - - - - -
68. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.935 0.935 - - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
69. DNER ENSDARG00000061031 123 0.932 - - - - - 0.932 - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
70. SETD9 ENSDARG00000074456 66 0.923 - - - - - - 0.923 - - SET domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-120727-15]
71. pou3f2a ENSDARG00000070220 817 0.914 - - - - - 0.914 - - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
72. lypla1 ENSDARG00000104228 185 0.913 - 0.913 - - - - - - - lysophospholipase I [Source:ZFIN;Acc:ZDB-GENE-050417-87]
73. pald1b ENSDARG00000039352 66 0.913 - - - - - - 0.913 - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
74. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 0.913 - 0.913 - - - - - - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
75. RFTN1 RFTN1 140 0.913 - 0.913 - - - - - - -
76. aox3 aox3 399 0.913 - 0.913 - - - - - - -
77. pknox1.1_1 ENSDARG00000018765 203 0.913 - 0.913 - - - - - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
78. mb21d2b mb21d2b 84 0.912 - - - - - 0.912 - - -
79. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 0.912 - - - - - 0.912 - - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
80. foxj1b ENSDARG00000088290 343 0.909 - 0.909 - - - - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
81. CABZ01028287.1 CABZ01028287.1 626 0.908 - - - - - 0.908 - - -
82. si:ch211-26b3.4 ENSDARG00000075491 50 0.905 - - - - - 0.905 - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
83. xkr8.2 ENSDARG00000076820 51 0.9 - - - - - - 0.900 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
84. DLGAP2 DLGAP2 36 0.9 - - - - - 0.900 - - -
85. insl5a ENSDARG00000070966, ENSDARG00000112563 45 0.9 - - - - - - 0.900 - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
86. im:7162084 im:7162084 665 0.9 - - - - - 0.900 - - -
87. lhpp ENSDARG00000060196 34 0.897 - 0.897 - - - - - - - phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:ZFIN;Acc:ZDB-GENE-070615-43]
88. HDAC7 HDAC7 12 0.897 - - - - - - 0.897 - -
89. mmp23bb ENSDARG00000009825 133 0.897 - 0.897 - - - - - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
90. cib2 ENSDARG00000102820 296 0.894 - - - - - 0.894 - - - calcium and integrin binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1663]
91. ponzr4 ENSDARG00000087440, ENSDARG00000114845 193 0.892 - - - - 0.892 - - - - plac8 onzin related protein 4 [Source:ZFIN;Acc:ZDB-GENE-050411-6]
92. pttg1 ENSDARG00000075421 166 0.891 - - - - - - 0.891 - - pituitary tumor-transforming 1 [Source:ZFIN;Acc:ZDB-GENE-081104-345]
93. slc6a1a ENSDARG00000045944 260 0.89 - 0.890 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
94. zgc:193682 zgc:193682 15 0.889 - 0.889 - - - - - - -
95. CABZ01067743.1 CABZ01067743.1 48 0.889 - 0.889 - - - - - - -
96. pou4f2 ENSDARG00000069737 451 0.889 - 0.889 - - - - - - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
97. sc:d0661 sc:d0661 12 0.889 - 0.889 - - - - - - -
98. nots ENSDARG00000099824 9 0.889 - 0.889 - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
99. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.889 - 0.889 - - - - - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
100. CABZ01028403.3 CABZ01028403.3 4 0.889 - 0.889 - - - - - - -

There are 1092 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA