Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cdkl1

Gene Name Gene ID Reads Annotation
cdkl1 ENSDARG00000017329 3345 cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]










Genes with expression patterns similar to cdkl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdkl1 ENSDARG00000017329 3345 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
2. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 3.407 0.850 0.727 - - - 0.899 0.931 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
3. nkx2.9 ENSDARG00000020332 357 3.245 0.807 0.705 - - - 0.864 0.869 - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
4. BX511121.1 ENSDARG00000029997 1774 3.204 - - - 0.909 0.746 - 0.797 - 0.752
5. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 3.016 0.808 - - - 0.722 0.737 0.749 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
6. cyr61l2 ENSDARG00000099985 725 2.617 0.867 - - - - 0.810 0.940 - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
7. nkx2.2a ENSDARG00000053298 747 2.604 0.903 - - - - 0.773 0.928 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
8. si:ch73-265d7.2 ENSDARG00000116713 2142 2.594 0.924 - - - - 0.793 0.877 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
9. pkd2l1 ENSDARG00000022503 372 2.55 0.843 - - - - 0.756 0.951 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
10. zgc:113531 ENSDARG00000038794 2063 2.528 0.833 - - - - 0.776 0.919 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
11. ntn1b ENSDARG00000022531 248 2.518 0.922 - - - - 0.800 0.796 - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
12. MSMP ENSDARG00000105581 254 2.517 0.919 - - - - 0.850 0.748 - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
13. hoxc13a ENSDARG00000070353 4815 2.475 - - - 0.868 0.782 - - - 0.825 homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
14. scg2a 800 2.464 0.870 - - - - 0.709 0.885 - - secretogranin II (chromogranin C) a
15. clu ENSDARG00000010434 498 2.461 0.851 - - - - 0.704 0.906 - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
16. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.447 0.765 - - - - - 0.811 0.871 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
17. nkx6.1 ENSDARG00000022569 3779 2.446 0.816 - - - - 0.780 0.850 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
18. urp2 ENSDARG00000067781 85 2.442 0.869 - - - - 0.726 0.847 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
19. CU658147.1 CU658147.1 69 2.393 0.843 - - - - 0.731 0.819 - -
20. frem2a ENSDARG00000076856 11022 2.288 - - 0.754 0.798 0.736 - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
21. foxa2 ENSDARG00000003411 2309 2.2 0.722 0.772 - - - 0.706 - - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
22. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.906 0.948 - - - - - 0.958 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
23. BX469915.2 BX469915.2 48 1.775 0.830 - - - - - 0.945 - -
24. scel ENSDARG00000034677, ENSDARG00000110476, ENSDARG00000111222, ENSDARG00000116782 3270 1.765 - - - 0.863 - - - - 0.902 sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]
25. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.759 - - - - - - 0.848 0.911 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
26. ntd5 ENSDARG00000040944 4988 1.738 - - - 0.916 0.822 - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
27. ADAMTS3 ENSDARG00000060127 2839 1.735 0.926 - - - - - 0.809 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
28. wnt4a ENSDARG00000071208 1157 1.729 - - - - - 0.810 0.919 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
29. mnx2a ENSDARG00000042106 939 1.719 0.866 - - - - - 0.853 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
30. vim ENSDARG00000010008 3551 1.71 - 0.853 - - - - 0.857 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
31. epb41a ENSDARG00000099283 860 1.707 - - - - - - 0.813 0.894 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
32. gfra3 ENSDARG00000087704 122 1.699 - - - - - 0.754 0.945 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
33. kif19 ENSDARG00000053026 124 1.692 0.811 - - - - - 0.881 - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
34. efemp2b ENSDARG00000020811 116 1.687 0.830 - - 0.857 - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
35. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.677 0.770 - - - - - 0.907 - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
36. gad1b ENSDARG00000027419 440 1.674 - - - - - 0.869 0.805 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
37. sulf2l sulf2l 4980 1.674 0.781 - - - - - 0.893 - -
38. fzd3b ENSDARG00000058692 627 1.672 - - - - - - 0.760 0.912 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
39. crb1 ENSDARG00000100506, ENSDARG00000110621 373 1.667 0.840 - - - - - 0.827 - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
40. guk1b ENSDARG00000005776 23 1.666 0.830 - - - - 0.836 - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
41. pkd1b ENSDARG00000033029 461 1.665 0.774 - - - - - 0.891 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
42. spon1a ENSDARG00000010029 355 1.663 - - - - - 0.770 0.893 - - spondin 1a [Source:ZFIN;Acc:ZDB-GENE-000427-9]
43. slc6a1b ENSDARG00000039647 1301 1.657 - - - - - - 0.867 0.790 - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
44. shhb ENSDARG00000038867 338 1.656 - - - - - 0.707 0.949 - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
45. C2CD4A ENSDARG00000061416 61 1.651 - - - - - 0.753 0.898 - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
46. tnika ENSDARG00000056218 728 1.649 - - - - - - 0.739 0.910 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
47. ift46 ENSDARG00000011240 2499 1.648 - - 0.722 - - - - 0.926 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
48. olig2 ENSDARG00000040946 1405 1.636 - - - - - 0.836 0.800 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
49. npr3 ENSDARG00000035253, ENSDARG00000109797, ENSDARG00000110534 857 1.632 - - - - - 0.766 0.866 - - natriuretic peptide receptor 3 [Source:ZFIN;Acc:ZDB-GENE-060531-91]
50. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.629 0.812 - - - - - 0.817 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
51. nkx2.2b ENSDARG00000101549 266 1.62 0.780 - - - - - 0.840 - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
52. si:ch73-389b16.2 ENSDARG00000103802 340 1.619 0.851 - - - - - 0.768 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
53. CABZ01074130.1 ENSDARG00000105274 26501 1.617 - - - 0.885 0.732 - - - -
54. and1 ENSDARG00000088514 37603 1.615 - - - 0.816 0.799 - - - - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
55. hoxa13a ENSDARG00000100312 543 1.61 - - - 0.847 0.763 - - - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
56. crabp1b ENSDARG00000035904 2753 1.609 - - - 0.888 - - - - 0.721 cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
57. PRKDC ENSDARG00000075083 693 1.6 - - - 0.701 - - - 0.899 - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
58. optc ENSDARG00000014358 1295 1.598 - - 0.805 - - - 0.793 - - opticin [Source:ZFIN;Acc:ZDB-GENE-030131-1798]
59. foxd1 ENSDARG00000029179 726 1.592 - 0.706 - - - - - 0.886 - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
60. pinx1 ENSDARG00000023532 4452 1.59 - 0.712 - - - - - 0.878 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
61. C11H1orf158 C11H1orf158 133 1.588 0.710 - - - - - 0.878 - -
62. efemp2a ENSDARG00000094324 39261 1.586 - - 0.794 0.792 - - - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
63. BX957337.1 BX957337.1 1685 1.581 - 0.712 - - - - - 0.869 -
64. SP6 ENSDARG00000099880, ENSDARG00000110548 665 1.575 - - - - 0.830 - - - 0.745 Sp6 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-1824]
65. slit1a ENSDARG00000044954 3810 1.569 - - - - - 0.765 0.804 - - slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
66. ehd3 ENSDARG00000007869 3238 1.563 - - - - - - - 0.805 0.758 EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
67. insm1a ENSDARG00000091756 1838 1.56 0.768 - - - - - 0.792 - - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
68. LRRC8A LRRC8A 406 1.554 0.830 - - 0.724 - - - - -
69. TMEM100_1 TMEM100_1 44 1.552 - - - - - 0.730 0.822 - -
70. st18 663 1.551 0.798 - - - - - 0.753 - - suppression of tumorigenicity 18, zinc finger
71. sst1.1 ENSDARG00000040799 677 1.546 - - - - - 0.713 0.833 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
72. sox12 ENSDARG00000025847 681 1.546 - - - - - - 0.733 0.813 - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
73. rassf8b ENSDARG00000045485 1568 1.54 - - - 0.712 - - - - 0.828 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
74. ptgs2a ENSDARG00000004539 1207 1.539 - - - 0.761 - - - - 0.778 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
75. ebf3 ebf3 4238 1.537 - - - - - - 0.706 0.831 -
76. zgc:158654 19 1.534 0.830 - - - - - 0.704 - - zgc:158654, transcript variant X1
77. ncana 1537 1.533 - - - - 0.721 - 0.812 - - neurocan a
78. ptbp2b ENSDARG00000015901 2458 1.526 - 0.820 - - - - 0.706 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
79. gad2 ENSDARG00000015537 724 1.524 0.794 - - - - - 0.730 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
80. RNF208 ENSDARG00000078056 60 1.521 0.779 - - - - - 0.742 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
81. sulf1 ENSDARG00000038428 2748 1.521 0.718 - - - - - 0.803 - - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
82. emilin3a ENSDARG00000078052 1652 1.51 0.719 - - - - - - - 0.791 elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
83. VWA7 ENSDARG00000061462 816 1.498 0.761 - - - - - 0.737 - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
84. fzd3a ENSDARG00000021664 1958 1.492 - - - - - - 0.734 0.758 - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
85. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.487 - - - - - 0.750 0.737 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
86. kazald2 ENSDARG00000078518 3062 1.487 - - - 0.782 0.705 - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
87. armc4 ENSDARG00000055128 220 1.477 - - - - 0.713 - 0.764 - - armadillo repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-100316-7]
88. ret ENSDARG00000055305 700 1.475 - - - - - 0.773 0.702 - - ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]
89. CU928222.1 ENSDARG00000097436 1662 1.474 - - - - - 0.752 0.722 - -
90. MYPN 404 1.461 - 0.757 - - - - 0.704 - - myopalladin, transcript variant X1
91. hoxc12a ENSDARG00000070352 7409 1.459 - - 0.752 - 0.707 - - - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
92. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.456 - - - - - - 0.738 0.718 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
93. mllt3 ENSDARG00000006754 985 1.449 - - - 0.710 0.739 - - - - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
94. cldn5a ENSDARG00000043716 3865 1.445 - - - - - 0.705 0.740 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
95. mapk11 ENSDARG00000045836 846 1.439 - 0.701 - - - - 0.738 - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
96. sall4 ENSDARG00000044485 1694 1.438 - - 0.714 0.724 - - - - - spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
97. ctnnd2b ENSDARG00000003779 964 1.436 - 0.712 - - - - 0.724 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
98. add2 ENSDARG00000074581 1402 1.42 - 0.700 - - - - 0.720 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
99. pbx3a ENSDARG00000089262 97 0.949 - - - - - - 0.949 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
100. GJC1 GJC1 44 0.945 - - - - - - 0.945 - -

There are 1106 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA